RNA–Protein interactions for RNA: ENST00000334983.9

CMTM7-201, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM7, Length 2,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-201ENST00000334983 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
CMTM7-201ENST00000334983 APLP2Q06481 763 aa28.87■■■□□ 2.21
CMTM7-201ENST00000334983 ADAMTS12P58397 1594 aa28.82■■■□□ 2.2
CMTM7-201ENST00000334983 FBLN2P98095 1184 aa28.82■■■□□ 2.2
CMTM7-201ENST00000334983 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
CMTM7-201ENST00000334983 SYNJ2O15056 1496 aa28.8■■■□□ 2.2
CMTM7-201ENST00000334983 CHMP7Q8WUX9 453 aaPredicted RBP28.79■■■□□ 2.2
CMTM7-201ENST00000334983 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
CMTM7-201ENST00000334983 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
CMTM7-201ENST00000334983 CUL7Q14999 1698 aa28.76■■■□□ 2.19
CMTM7-201ENST00000334983 CHD1O14646 1710 aa28.7■■■□□ 2.19
CMTM7-201ENST00000334983 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
CMTM7-201ENST00000334983 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.17
CMTM7-201ENST00000334983 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
CMTM7-201ENST00000334983 ARHGAP35Q9NRY4 1499 aa28.56■■■□□ 2.16
CMTM7-201ENST00000334983 HNRNPUL2Q1KMD3 747 aaKnown RBP28.56■■■□□ 2.16
CMTM7-201ENST00000334983 NUP160Q12769 1436 aa28.54■■■□□ 2.16
CMTM7-201ENST00000334983 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
CMTM7-201ENST00000334983 RRBP1Q9P2E9 1410 aaKnown RBP28.44■■■□□ 2.14
CMTM7-201ENST00000334983 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
CMTM7-201ENST00000334983 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
CMTM7-201ENST00000334983 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
CMTM7-201ENST00000334983 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
CMTM7-201ENST00000334983 KIAA0586Q9BVV6 1533 aa28.39■■■□□ 2.14
CMTM7-201ENST00000334983 CLSPNQ9HAW4 1339 aa28.39■■■□□ 2.14
CMTM7-201ENST00000334983 ZNF316A6NFI3 1004 aaPredicted RBP28.36■■■□□ 2.13
CMTM7-201ENST00000334983 JPH4Q96JJ6 628 aa28.3■■■□□ 2.12
CMTM7-201ENST00000334983 IQGAP2Q13576 1575 aa28.29■■■□□ 2.12
CMTM7-201ENST00000334983 CTTNBP2Q8WZ74 1663 aa28.28■■■□□ 2.12
CMTM7-201ENST00000334983 TIAM1Q13009 1591 aa28.26■■■□□ 2.11
CMTM7-201ENST00000334983 CCNB3Q8WWL7 1395 aa28.25■■■□□ 2.11
CMTM7-201ENST00000334983 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
CMTM7-201ENST00000334983 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
CMTM7-201ENST00000334983 DHX57Q6P158 1386 aaKnown RBP28.21■■■□□ 2.11
CMTM7-201ENST00000334983 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
CMTM7-201ENST00000334983 EFCAB5A4FU69 1503 aa28.18■■■□□ 2.1
CMTM7-201ENST00000334983 UGGT2Q9NYU1 1516 aa28.16■■■□□ 2.1
CMTM7-201ENST00000334983 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
CMTM7-201ENST00000334983 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
CMTM7-201ENST00000334983 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
CMTM7-201ENST00000334983 CFAP43Q8NDM7 1665 aa28.1■■■□□ 2.09
CMTM7-201ENST00000334983 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
CMTM7-201ENST00000334983 CARMIL2Q6F5E8 1435 aa28.06■■■□□ 2.08
CMTM7-201ENST00000334983 SCAF1Q9H7N4 1312 aaKnown RBP28.06■■■□□ 2.08
CMTM7-201ENST00000334983 FYCO1Q9BQS8 1478 aa28.06■■■□□ 2.08
CMTM7-201ENST00000334983 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
CMTM7-201ENST00000334983 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
CMTM7-201ENST00000334983 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
CMTM7-201ENST00000334983 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
CMTM7-201ENST00000334983 ACIN1Q9UKV3 1341 aaKnown RBP28.04■■■□□ 2.08
CMTM7-201ENST00000334983 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
CMTM7-201ENST00000334983 CASKIN1Q8WXD9 1431 aa28.02■■■□□ 2.08
CMTM7-201ENST00000334983 CENPBP07199 599 aaPredicted RBP28.01■■■□□ 2.07
CMTM7-201ENST00000334983 KIAA0556O60303 1618 aa28.01■■■□□ 2.07
CMTM7-201ENST00000334983 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
CMTM7-201ENST00000334983 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
CMTM7-201ENST00000334983 FMN1Q68DA7 1419 aa27.96■■■□□ 2.07
CMTM7-201ENST00000334983 PHLDB1Q86UU1 1377 aa27.95■■■□□ 2.07
CMTM7-201ENST00000334983 PTPRGP23470 1445 aa27.91■■■□□ 2.06
CMTM7-201ENST00000334983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.91■■■□□ 2.06
CMTM7-201ENST00000334983 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
CMTM7-201ENST00000334983 NEUROD1Q13562 356 aa27.9■■■□□ 2.06
CMTM7-201ENST00000334983 RAB3GAP2Q9H2M9 1393 aa27.89■■■□□ 2.06
CMTM7-201ENST00000334983 SETD5Q9C0A6 1442 aa27.87■■■□□ 2.05
CMTM7-201ENST00000334983 ITGAEP38570 1179 aa27.83■■■□□ 2.05
CMTM7-201ENST00000334983 MIER1Q8N108 512 aa27.77■■■□□ 2.04
CMTM7-201ENST00000334983 ATP1B4Q9UN42 357 aaPredicted RBP27.77■■■□□ 2.04
CMTM7-201ENST00000334983 MAPKBP1O60336 1514 aa27.76■■■□□ 2.03
CMTM7-201ENST00000334983 PLB1Q6P1J6 1458 aa27.75■■■□□ 2.03
CMTM7-201ENST00000334983 FAM50AQ14320 339 aaKnown RBP27.74■■■□□ 2.03
CMTM7-201ENST00000334983 UACAQ9BZF9 1416 aa27.73■■■□□ 2.03
CMTM7-201ENST00000334983 ABCA8O94911 1581 aa27.68■■■□□ 2.02
CMTM7-201ENST00000334983 FGD6Q6ZV73 1430 aa27.68■■■□□ 2.02
CMTM7-201ENST00000334983 MTUS2Q5JR59 1369 aa27.66■■■□□ 2.02
CMTM7-201ENST00000334983 ADCY10Q96PN6 1610 aa27.66■■■□□ 2.02
CMTM7-201ENST00000334983 ABCC2Q92887 1545 aa27.65■■■□□ 2.02
CMTM7-201ENST00000334983 UHRF1BP1LA0JNW5 1464 aa27.64■■■□□ 2.02
CMTM7-201ENST00000334983 TIMELESSQ9UNS1 1208 aa27.63■■■□□ 2.01
CMTM7-201ENST00000334983 RAPGEF6Q8TEU7 1601 aa27.62■■■□□ 2.01
CMTM7-201ENST00000334983 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
CMTM7-201ENST00000334983 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
CMTM7-201ENST00000334983 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
CMTM7-201ENST00000334983 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
CMTM7-201ENST00000334983 CCDC18Q5T9S5 1454 aa27.58■■■□□ 2.01
CMTM7-201ENST00000334983 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
CMTM7-201ENST00000334983 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
CMTM7-201ENST00000334983 NCOA2Q15596 1464 aa27.56■■■□□ 2
CMTM7-201ENST00000334983 MYOM3Q5VTT5 1437 aa27.55■■■□□ 2
CMTM7-201ENST00000334983 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
CMTM7-201ENST00000334983 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
CMTM7-201ENST00000334983 HFM1A2PYH4 1435 aa27.51■■□□□ 1.99
CMTM7-201ENST00000334983 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
CMTM7-201ENST00000334983 ATP10BO94823 1461 aa27.5■■□□□ 1.99
CMTM7-201ENST00000334983 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
CMTM7-201ENST00000334983 YTHDC1Q96MU7 727 aaKnown RBP27.48■■□□□ 1.99
CMTM7-201ENST00000334983 EPRSP07814 1512 aaKnown RBP27.46■■□□□ 1.99
CMTM7-201ENST00000334983 ZCCHC11Q5TAX3 1644 aaKnown RBP27.45■■□□□ 1.99
CMTM7-201ENST00000334983 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
CMTM7-201ENST00000334983 PTPRKQ15262 1439 aa27.42■■□□□ 1.98
CMTM7-201ENST00000334983 PTPN23Q9H3S7 1636 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms