RNA–Protein interactions for RNA: ENST00000327925.5

CCDC144NL-201, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC144NL, Length 2,806 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-201ENST00000327925 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
CCDC144NL-201ENST00000327925 CUX2O14529 1486 aa18.58■□□□□ 0.57
CCDC144NL-201ENST00000327925 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-201ENST00000327925 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-201ENST00000327925 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
CCDC144NL-201ENST00000327925 DEKP35659 375 aaKnown RBP18.55■□□□□ 0.56
CCDC144NL-201ENST00000327925 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
CCDC144NL-201ENST00000327925 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
CCDC144NL-201ENST00000327925 IGF1RP08069 1367 aa18.47■□□□□ 0.55
CCDC144NL-201ENST00000327925 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
CCDC144NL-201ENST00000327925 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
CCDC144NL-201ENST00000327925 NBR1Q14596 966 aa18.45■□□□□ 0.54
CCDC144NL-201ENST00000327925 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
CCDC144NL-201ENST00000327925 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
CCDC144NL-201ENST00000327925 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
CCDC144NL-201ENST00000327925 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
CCDC144NL-201ENST00000327925 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
CCDC144NL-201ENST00000327925 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
CCDC144NL-201ENST00000327925 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
CCDC144NL-201ENST00000327925 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
CCDC144NL-201ENST00000327925 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.52
CCDC144NL-201ENST00000327925 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
CCDC144NL-201ENST00000327925 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 ANP32CO43423 234 aa18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
CCDC144NL-201ENST00000327925 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC144NL-201ENST00000327925 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
CCDC144NL-201ENST00000327925 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
CCDC144NL-201ENST00000327925 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
CCDC144NL-201ENST00000327925 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
CCDC144NL-201ENST00000327925 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
CCDC144NL-201ENST00000327925 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CCDC144NL-201ENST00000327925 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
CCDC144NL-201ENST00000327925 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
CCDC144NL-201ENST00000327925 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
CCDC144NL-201ENST00000327925 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
CCDC144NL-201ENST00000327925 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
CCDC144NL-201ENST00000327925 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.492e-7■■■■■ 31
CCDC144NL-201ENST00000327925 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
CCDC144NL-201ENST00000327925 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
CCDC144NL-201ENST00000327925 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
CCDC144NL-201ENST00000327925 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.49
CCDC144NL-201ENST00000327925 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
CCDC144NL-201ENST00000327925 CUL7Q14999 1698 aa18.07■□□□□ 0.48
CCDC144NL-201ENST00000327925 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
CCDC144NL-201ENST00000327925 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
CCDC144NL-201ENST00000327925 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
CCDC144NL-201ENST00000327925 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
CCDC144NL-201ENST00000327925 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
CCDC144NL-201ENST00000327925 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
CCDC144NL-201ENST00000327925 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
CCDC144NL-201ENST00000327925 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
CCDC144NL-201ENST00000327925 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
CCDC144NL-201ENST00000327925 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
CCDC144NL-201ENST00000327925 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
CCDC144NL-201ENST00000327925 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
CCDC144NL-201ENST00000327925 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 IPO9Q96P70 1041 aaKnown RBP17.91■□□□□ 0.46
CCDC144NL-201ENST00000327925 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
CCDC144NL-201ENST00000327925 WDR62O43379 1518 aa17.87■□□□□ 0.45
CCDC144NL-201ENST00000327925 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
CCDC144NL-201ENST00000327925 FBLN2P98095 1184 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
CCDC144NL-201ENST00000327925 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
CCDC144NL-201ENST00000327925 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 FYCO1Q9BQS8 1478 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
CCDC144NL-201ENST00000327925 TONSLQ96HA7 1378 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 NEFMP07197 916 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
CCDC144NL-201ENST00000327925 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms