RNA–Protein interactions for RNA: ENST00000327925.5

CCDC144NL-201, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC144NL, Length 2,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-201ENST00000327925 NISCHQ9Y2I1 1504 aa25.95■■□□□ 1.74
CCDC144NL-201ENST00000327925 HRCP23327 699 aa22.24■■□□□ 1.15
CCDC144NL-201ENST00000327925 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
CCDC144NL-201ENST00000327925 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
CCDC144NL-201ENST00000327925 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
CCDC144NL-201ENST00000327925 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
CCDC144NL-201ENST00000327925 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
CCDC144NL-201ENST00000327925 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
CCDC144NL-201ENST00000327925 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
CCDC144NL-201ENST00000327925 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
CCDC144NL-201ENST00000327925 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
CCDC144NL-201ENST00000327925 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
CCDC144NL-201ENST00000327925 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
CCDC144NL-201ENST00000327925 ABCC9O60706 1549 aa21.16■□□□□ 0.98
CCDC144NL-201ENST00000327925 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.97
CCDC144NL-201ENST00000327925 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
CCDC144NL-201ENST00000327925 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
CCDC144NL-201ENST00000327925 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.94
CCDC144NL-201ENST00000327925 MYT1Q01538 1121 aa20.67■□□□□ 0.9
CCDC144NL-201ENST00000327925 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
CCDC144NL-201ENST00000327925 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
CCDC144NL-201ENST00000327925 NACADO15069 1562 aa20.61■□□□□ 0.89
CCDC144NL-201ENST00000327925 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
CCDC144NL-201ENST00000327925 GTF3C3Q9Y5Q9 886 aa20.57■□□□□ 0.88
CCDC144NL-201ENST00000327925 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
CCDC144NL-201ENST00000327925 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
CCDC144NL-201ENST00000327925 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
CCDC144NL-201ENST00000327925 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
CCDC144NL-201ENST00000327925 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
CCDC144NL-201ENST00000327925 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
CCDC144NL-201ENST00000327925 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
CCDC144NL-201ENST00000327925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
CCDC144NL-201ENST00000327925 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
CCDC144NL-201ENST00000327925 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCDC144NL-201ENST00000327925 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
CCDC144NL-201ENST00000327925 WIZO95785 1651 aa20.14■□□□□ 0.81
CCDC144NL-201ENST00000327925 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
CCDC144NL-201ENST00000327925 CCER1Q8TC90 406 aaPredicted RBP20.12■□□□□ 0.81
CCDC144NL-201ENST00000327925 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
CCDC144NL-201ENST00000327925 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
CCDC144NL-201ENST00000327925 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
CCDC144NL-201ENST00000327925 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
CCDC144NL-201ENST00000327925 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
CCDC144NL-201ENST00000327925 MIER1Q8N108 512 aa19.71■□□□□ 0.74
CCDC144NL-201ENST00000327925 BCL11AQ9H165 835 aa19.7■□□□□ 0.74
CCDC144NL-201ENST00000327925 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
CCDC144NL-201ENST00000327925 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
CCDC144NL-201ENST00000327925 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
CCDC144NL-201ENST00000327925 SMARCA2P51531 1590 aa19.62■□□□□ 0.73
CCDC144NL-201ENST00000327925 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
CCDC144NL-201ENST00000327925 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
CCDC144NL-201ENST00000327925 ANP32EQ9BTT0 268 aa19.51■□□□□ 0.71
CCDC144NL-201ENST00000327925 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
CCDC144NL-201ENST00000327925 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
CCDC144NL-201ENST00000327925 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
CCDC144NL-201ENST00000327925 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
CCDC144NL-201ENST00000327925 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
CCDC144NL-201ENST00000327925 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
CCDC144NL-201ENST00000327925 SOGA1O94964 1423 aa19.28■□□□□ 0.68
CCDC144NL-201ENST00000327925 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
CCDC144NL-201ENST00000327925 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
CCDC144NL-201ENST00000327925 BCANQ96GW7 911 aa19.24■□□□□ 0.67
CCDC144NL-201ENST00000327925 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
CCDC144NL-201ENST00000327925 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
CCDC144NL-201ENST00000327925 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
CCDC144NL-201ENST00000327925 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
CCDC144NL-201ENST00000327925 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
CCDC144NL-201ENST00000327925 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
CCDC144NL-201ENST00000327925 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
CCDC144NL-201ENST00000327925 PRKCSHP14314 528 aaPredicted RBP19.01■□□□□ 0.63
CCDC144NL-201ENST00000327925 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
CCDC144NL-201ENST00000327925 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
CCDC144NL-201ENST00000327925 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
CCDC144NL-201ENST00000327925 FKBP8Q14318 412 aa18.96■□□□□ 0.63
CCDC144NL-201ENST00000327925 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
CCDC144NL-201ENST00000327925 ITGAEP38570 1179 aa18.92■□□□□ 0.62
CCDC144NL-201ENST00000327925 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
CCDC144NL-201ENST00000327925 EEA1Q15075 1411 aa18.86■□□□□ 0.61
CCDC144NL-201ENST00000327925 CFTRP13569 1480 aa18.86■□□□□ 0.61
CCDC144NL-201ENST00000327925 CUX1P39880 1505 aa18.85■□□□□ 0.61
CCDC144NL-201ENST00000327925 MSH5O43196 834 aa18.84■□□□□ 0.61
CCDC144NL-201ENST00000327925 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
CCDC144NL-201ENST00000327925 TNIKQ9UKE5 1360 aa18.84■□□□□ 0.61
CCDC144NL-201ENST00000327925 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
CCDC144NL-201ENST00000327925 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
CCDC144NL-201ENST00000327925 BIVM-ERCC5R4GMW8 1640 aa18.79■□□□□ 0.6
CCDC144NL-201ENST00000327925 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
CCDC144NL-201ENST00000327925 CEP164Q9UPV0 1460 aa18.75■□□□□ 0.59
CCDC144NL-201ENST00000327925 NESP48681 1621 aa18.74■□□□□ 0.59
CCDC144NL-201ENST00000327925 KIF21BO75037 1637 aa18.7■□□□□ 0.58
CCDC144NL-201ENST00000327925 NEFLP07196 543 aa18.69■□□□□ 0.58
CCDC144NL-201ENST00000327925 ERICH6Q7L0X2 663 aa18.68■□□□□ 0.58
CCDC144NL-201ENST00000327925 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
CCDC144NL-201ENST00000327925 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
CCDC144NL-201ENST00000327925 APLP2Q06481 763 aa18.65■□□□□ 0.58
CCDC144NL-201ENST00000327925 CLIP1P30622 1438 aa18.65■□□□□ 0.58
CCDC144NL-201ENST00000327925 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
CCDC144NL-201ENST00000327925 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
CCDC144NL-201ENST00000327925 DDX10Q13206 875 aaKnown RBP18.59■□□□□ 0.57
CCDC144NL-201ENST00000327925 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms