RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SETD5Q9C0A6 1442 aa23.94■■□□□ 1.42
SSH1-201ENST00000326470 IGF1RP08069 1367 aa23.86■■□□□ 1.41
SSH1-201ENST00000326470 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
SSH1-201ENST00000326470 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
SSH1-201ENST00000326470 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
SSH1-201ENST00000326470 ANP32EQ9BTT0 268 aa23.83■■□□□ 1.41
SSH1-201ENST00000326470 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
SSH1-201ENST00000326470 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
SSH1-201ENST00000326470 DDX10Q13206 875 aaKnown RBP23.82■■□□□ 1.4
SSH1-201ENST00000326470 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
SSH1-201ENST00000326470 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
SSH1-201ENST00000326470 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
SSH1-201ENST00000326470 NESP48681 1621 aa23.77■■□□□ 1.4
SSH1-201ENST00000326470 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
SSH1-201ENST00000326470 FKBP8Q14318 412 aa23.76■■□□□ 1.39
SSH1-201ENST00000326470 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
SSH1-201ENST00000326470 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
SSH1-201ENST00000326470 BCANQ96GW7 911 aa23.73■■□□□ 1.39
SSH1-201ENST00000326470 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
SSH1-201ENST00000326470 CCER2I3L3R5 266 aa23.72■■□□□ 1.39
SSH1-201ENST00000326470 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
SSH1-201ENST00000326470 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
SSH1-201ENST00000326470 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
SSH1-201ENST00000326470 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
SSH1-201ENST00000326470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
SSH1-201ENST00000326470 NEFLP07196 543 aa23.64■■□□□ 1.38
SSH1-201ENST00000326470 ANP32CO43423 234 aa23.63■■□□□ 1.37
SSH1-201ENST00000326470 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SSH1-201ENST00000326470 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.36
SSH1-201ENST00000326470 FYCO1Q9BQS8 1478 aa23.57■■□□□ 1.36
SSH1-201ENST00000326470 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
SSH1-201ENST00000326470 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
SSH1-201ENST00000326470 RBM19Q9Y4C8 960 aaKnown RBP23.54■■□□□ 1.36
SSH1-201ENST00000326470 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
SSH1-201ENST00000326470 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
SSH1-201ENST00000326470 ATP1B4Q9UN42 357 aaPredicted RBP23.53■■□□□ 1.36
SSH1-201ENST00000326470 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
SSH1-201ENST00000326470 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
SSH1-201ENST00000326470 EFCAB5A4FU69 1503 aa23.51■■□□□ 1.35
SSH1-201ENST00000326470 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
SSH1-201ENST00000326470 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
SSH1-201ENST00000326470 URB2Q14146 1524 aaKnown RBP23.49■■□□□ 1.35
SSH1-201ENST00000326470 FGD6Q6ZV73 1430 aa23.47■■□□□ 1.35
SSH1-201ENST00000326470 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
SSH1-201ENST00000326470 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
SSH1-201ENST00000326470 UACAQ9BZF9 1416 aa23.44■■□□□ 1.34
SSH1-201ENST00000326470 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
SSH1-201ENST00000326470 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
SSH1-201ENST00000326470 FMN1Q68DA7 1419 aa23.39■■□□□ 1.33
SSH1-201ENST00000326470 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
SSH1-201ENST00000326470 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
SSH1-201ENST00000326470 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
SSH1-201ENST00000326470 NAIPQ13075 1403 aa23.33■■□□□ 1.33
SSH1-201ENST00000326470 CUL7Q14999 1698 aa23.33■■□□□ 1.33
SSH1-201ENST00000326470 MTUS2Q5JR59 1369 aa23.33■■□□□ 1.33
SSH1-201ENST00000326470 CTTNBP2Q8WZ74 1663 aa23.33■■□□□ 1.33
SSH1-201ENST00000326470 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
SSH1-201ENST00000326470 BCL11AQ9H165 835 aa23.3■■□□□ 1.32
SSH1-201ENST00000326470 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
SSH1-201ENST00000326470 HNRNPUQ00839 825 aaKnown RBP eCLIP23.29■■□□□ 1.32
SSH1-201ENST00000326470 MYOM3Q5VTT5 1437 aa23.27■■□□□ 1.32
SSH1-201ENST00000326470 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
SSH1-201ENST00000326470 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
SSH1-201ENST00000326470 MSH5O43196 834 aa23.24■■□□□ 1.31
SSH1-201ENST00000326470 FANCIQ9NVI1 1328 aa23.23■■□□□ 1.31
SSH1-201ENST00000326470 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
SSH1-201ENST00000326470 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
SSH1-201ENST00000326470 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
SSH1-201ENST00000326470 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
SSH1-201ENST00000326470 ERICH6BQ5W0A0 696 aa23.2■■□□□ 1.3
SSH1-201ENST00000326470 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
SSH1-201ENST00000326470 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
SSH1-201ENST00000326470 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
SSH1-201ENST00000326470 LRRIQ1Q96JM4 1722 aa23.19■■□□□ 1.3
SSH1-201ENST00000326470 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
SSH1-201ENST00000326470 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
SSH1-201ENST00000326470 SUPT6HQ7KZ85 1726 aaKnown RBP23.18■■□□□ 1.3
SSH1-201ENST00000326470 EHBP1L1Q8N3D4 1523 aa23.17■■□□□ 1.3
SSH1-201ENST00000326470 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.3
SSH1-201ENST00000326470 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.29
SSH1-201ENST00000326470 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
SSH1-201ENST00000326470 WDR62O43379 1518 aa23.13■■□□□ 1.29
SSH1-201ENST00000326470 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
SSH1-201ENST00000326470 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
SSH1-201ENST00000326470 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
SSH1-201ENST00000326470 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
SSH1-201ENST00000326470 ERCC6Q03468 1493 aa23.1■■□□□ 1.29
SSH1-201ENST00000326470 TCOF1Q13428 1488 aaKnown RBP23.09■■□□□ 1.29
SSH1-201ENST00000326470 PPP4R2Q9NY27 417 aa23.09■■□□□ 1.29
SSH1-201ENST00000326470 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
SSH1-201ENST00000326470 AKNAQ7Z591 1439 aa23.08■■□□□ 1.29
SSH1-201ENST00000326470 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
SSH1-201ENST00000326470 RRP7BPQ9NSQ0 103 aa23.08■■□□□ 1.29
SSH1-201ENST00000326470 CCDC184Q52MB2 194 aa23.04■■□□□ 1.28
SSH1-201ENST00000326470 MAGI3Q5TCQ9 1506 aa23.04■■□□□ 1.28
SSH1-201ENST00000326470 NCOA1Q15788 1441 aa23.03■■□□□ 1.28
SSH1-201ENST00000326470 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
SSH1-201ENST00000326470 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
SSH1-201ENST00000326470 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
SSH1-201ENST00000326470 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms