RNA–Protein interactions for RNA: ENST00000325823.11

PDXDC1-201, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 1,113 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-201ENST00000325823 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
PDXDC1-201ENST00000325823 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
PDXDC1-201ENST00000325823 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
PDXDC1-201ENST00000325823 CLIP1P30622 1438 aa11.51□□□□□ -0.57
PDXDC1-201ENST00000325823 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
PDXDC1-201ENST00000325823 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-201ENST00000325823 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
PDXDC1-201ENST00000325823 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
PDXDC1-201ENST00000325823 VPS8Q8N3P4 1428 aa11.45□□□□□ -0.58
PDXDC1-201ENST00000325823 APLP2Q06481 763 aa11.45□□□□□ -0.58
PDXDC1-201ENST00000325823 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
PDXDC1-201ENST00000325823 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
PDXDC1-201ENST00000325823 CUX2O14529 1486 aa11.41□□□□□ -0.58
PDXDC1-201ENST00000325823 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
PDXDC1-201ENST00000325823 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
PDXDC1-201ENST00000325823 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
PDXDC1-201ENST00000325823 IGF1RP08069 1367 aa11.39□□□□□ -0.59
PDXDC1-201ENST00000325823 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
PDXDC1-201ENST00000325823 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
PDXDC1-201ENST00000325823 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
PDXDC1-201ENST00000325823 CARMIL1Q5VZK9 1371 aa11.35□□□□□ -0.59
PDXDC1-201ENST00000325823 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
PDXDC1-201ENST00000325823 NESP48681 1621 aa11.33□□□□□ -0.6
PDXDC1-201ENST00000325823 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-201ENST00000325823 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
PDXDC1-201ENST00000325823 CUL7Q14999 1698 aa11.3□□□□□ -0.6
PDXDC1-201ENST00000325823 PROM2Q8N271 834 aa11.3□□□□□ -0.6
PDXDC1-201ENST00000325823 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
PDXDC1-201ENST00000325823 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
PDXDC1-201ENST00000325823 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
PDXDC1-201ENST00000325823 URB2Q14146 1524 aaKnown RBP11.28□□□□□ -0.6
PDXDC1-201ENST00000325823 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
PDXDC1-201ENST00000325823 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
PDXDC1-201ENST00000325823 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
PDXDC1-201ENST00000325823 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
PDXDC1-201ENST00000325823 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
PDXDC1-201ENST00000325823 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
PDXDC1-201ENST00000325823 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-201ENST00000325823 FHAD1B1AJZ9 1412 aa11.23□□□□□ -0.61
PDXDC1-201ENST00000325823 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
PDXDC1-201ENST00000325823 DSG3P32926 999 aa11.22□□□□□ -0.61
PDXDC1-201ENST00000325823 KIF21AQ7Z4S6 1674 aa11.22□□□□□ -0.61
PDXDC1-201ENST00000325823 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
PDXDC1-201ENST00000325823 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
PDXDC1-201ENST00000325823 CAPN15O75808 1086 aa11.2□□□□□ -0.62
PDXDC1-201ENST00000325823 HAP1P54257 671 aaPredicted RBP11.2□□□□□ -0.62
PDXDC1-201ENST00000325823 FBLN2P98095 1184 aa11.2□□□□□ -0.62
PDXDC1-201ENST00000325823 BCANQ96GW7 911 aa11.2□□□□□ -0.62
PDXDC1-201ENST00000325823 CTTNBP2Q8WZ74 1663 aa11.19□□□□□ -0.62
PDXDC1-201ENST00000325823 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
PDXDC1-201ENST00000325823 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-201ENST00000325823 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.621e-13■■■■□ 23.4
PDXDC1-201ENST00000325823 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
PDXDC1-201ENST00000325823 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
PDXDC1-201ENST00000325823 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
PDXDC1-201ENST00000325823 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
PDXDC1-201ENST00000325823 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
PDXDC1-201ENST00000325823 TDRD9Q8NDG6 1382 aaKnown RBP11.14□□□□□ -0.63
PDXDC1-201ENST00000325823 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
PDXDC1-201ENST00000325823 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
PDXDC1-201ENST00000325823 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
PDXDC1-201ENST00000325823 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
PDXDC1-201ENST00000325823 CASKIN1Q8WXD9 1431 aa11.12□□□□□ -0.63
PDXDC1-201ENST00000325823 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
PDXDC1-201ENST00000325823 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
PDXDC1-201ENST00000325823 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
PDXDC1-201ENST00000325823 WDR62O43379 1518 aa11.1□□□□□ -0.63
PDXDC1-201ENST00000325823 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
PDXDC1-201ENST00000325823 PBRM1Q86U86 1689 aa11.09□□□□□ -0.63
PDXDC1-201ENST00000325823 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
PDXDC1-201ENST00000325823 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
PDXDC1-201ENST00000325823 PCF11O94913 1555 aaKnown RBP11.08□□□□□ -0.64
PDXDC1-201ENST00000325823 PKD2Q13563 968 aa11.07□□□□□ -0.64
PDXDC1-201ENST00000325823 FHOD3Q2V2M9 1422 aa11.07□□□□□ -0.64
PDXDC1-201ENST00000325823 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
PDXDC1-201ENST00000325823 ADAMTS12P58397 1594 aa11.06□□□□□ -0.64
PDXDC1-201ENST00000325823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDXDC1-201ENST00000325823 P3H3Q8IVL6 736 aa11.04□□□□□ -0.64
PDXDC1-201ENST00000325823 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
PDXDC1-201ENST00000325823 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
PDXDC1-201ENST00000325823 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.65
PDXDC1-201ENST00000325823 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.65
PDXDC1-201ENST00000325823 IQGAP2Q13576 1575 aa11.02□□□□□ -0.65
PDXDC1-201ENST00000325823 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
PDXDC1-201ENST00000325823 ATP1B4Q9UN42 357 aaPredicted RBP11□□□□□ -0.65
PDXDC1-201ENST00000325823 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
PDXDC1-201ENST00000325823 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
PDXDC1-201ENST00000325823 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
PDXDC1-201ENST00000325823 DHX57Q6P158 1386 aaKnown RBP10.98□□□□□ -0.65
PDXDC1-201ENST00000325823 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
PDXDC1-201ENST00000325823 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
PDXDC1-201ENST00000325823 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
PDXDC1-201ENST00000325823 MAGI1Q96QZ7 1491 aaPredicted RBP10.97□□□□□ -0.65
PDXDC1-201ENST00000325823 KIAA0586Q9BVV6 1533 aa10.97□□□□□ -0.65
PDXDC1-201ENST00000325823 EHBP1L1Q8N3D4 1523 aa10.96□□□□□ -0.65
PDXDC1-201ENST00000325823 ZNF608Q9ULD9 1512 aaPredicted RBP10.96□□□□□ -0.65
PDXDC1-201ENST00000325823 SETD5Q9C0A6 1442 aa10.96□□□□□ -0.65
PDXDC1-201ENST00000325823 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.65
PDXDC1-201ENST00000325823 HECW1Q76N89 1606 aa10.95□□□□□ -0.66
PDXDC1-201ENST00000325823 EIF4G3O43432 1585 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms