RNA–Protein interactions for RNA: ENST00000319551.12

KRBA1-201, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene KRBA1, Length 4,020 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-201ENST00000319551 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
KRBA1-201ENST00000319551 FOXD1Q16676 465 aa17.36■□□□□ 0.37
KRBA1-201ENST00000319551 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
KRBA1-201ENST00000319551 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
KRBA1-201ENST00000319551 VPS8Q8N3P4 1428 aa17.35■□□□□ 0.37
KRBA1-201ENST00000319551 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
KRBA1-201ENST00000319551 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
KRBA1-201ENST00000319551 IRX6P78412 446 aaPredicted RBP17.31■□□□□ 0.36
KRBA1-201ENST00000319551 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
KRBA1-201ENST00000319551 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
KRBA1-201ENST00000319551 HNRNPUQ00839 825 aaKnown RBP eCLIP17.3■□□□□ 0.36
KRBA1-201ENST00000319551 CCNB3Q8WWL7 1395 aa17.3■□□□□ 0.36
KRBA1-201ENST00000319551 FKBP8Q14318 412 aa17.27■□□□□ 0.36
KRBA1-201ENST00000319551 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
KRBA1-201ENST00000319551 FHOD3Q2V2M9 1422 aa17.26■□□□□ 0.35
KRBA1-201ENST00000319551 TSPY4P0CV99 314 aa17.26■□□□□ 0.35
KRBA1-201ENST00000319551 TSPY10P0CW01 314 aa17.26■□□□□ 0.35
KRBA1-201ENST00000319551 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
KRBA1-201ENST00000319551 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
KRBA1-201ENST00000319551 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
KRBA1-201ENST00000319551 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
KRBA1-201ENST00000319551 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
KRBA1-201ENST00000319551 NESP48681 1621 aa17.13■□□□□ 0.33
KRBA1-201ENST00000319551 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
KRBA1-201ENST00000319551 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
KRBA1-201ENST00000319551 SYNJ1O43426 1573 aa17.12■□□□□ 0.33
KRBA1-201ENST00000319551 IGF1RP08069 1367 aa17.11■□□□□ 0.33
KRBA1-201ENST00000319551 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
KRBA1-201ENST00000319551 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.33
KRBA1-201ENST00000319551 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
KRBA1-201ENST00000319551 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
KRBA1-201ENST00000319551 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
KRBA1-201ENST00000319551 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
KRBA1-201ENST00000319551 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
KRBA1-201ENST00000319551 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
KRBA1-201ENST00000319551 CLSPNQ9HAW4 1339 aa17■□□□□ 0.31
KRBA1-201ENST00000319551 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
KRBA1-201ENST00000319551 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
KRBA1-201ENST00000319551 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■■■ 34.2
KRBA1-201ENST00000319551 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
KRBA1-201ENST00000319551 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
KRBA1-201ENST00000319551 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
KRBA1-201ENST00000319551 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
KRBA1-201ENST00000319551 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
KRBA1-201ENST00000319551 DCAF11Q8TEB1 546 aa16.95■□□□□ 0.3
KRBA1-201ENST00000319551 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
KRBA1-201ENST00000319551 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
KRBA1-201ENST00000319551 PKD2Q13563 968 aa16.94■□□□□ 0.3
KRBA1-201ENST00000319551 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
KRBA1-201ENST00000319551 KIF21BO75037 1637 aa16.93■□□□□ 0.3
KRBA1-201ENST00000319551 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
KRBA1-201ENST00000319551 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
KRBA1-201ENST00000319551 MPHOSPH9Q99550 1183 aa16.91■□□□□ 0.3
KRBA1-201ENST00000319551 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
KRBA1-201ENST00000319551 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
KRBA1-201ENST00000319551 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
KRBA1-201ENST00000319551 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
KRBA1-201ENST00000319551 CUX1P39880 1505 aa16.88■□□□□ 0.29
KRBA1-201ENST00000319551 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
KRBA1-201ENST00000319551 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
KRBA1-201ENST00000319551 CFTRP13569 1480 aa16.86■□□□□ 0.29
KRBA1-201ENST00000319551 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
KRBA1-201ENST00000319551 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
KRBA1-201ENST00000319551 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.29
KRBA1-201ENST00000319551 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
KRBA1-201ENST00000319551 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
KRBA1-201ENST00000319551 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
KRBA1-201ENST00000319551 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
KRBA1-201ENST00000319551 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
KRBA1-201ENST00000319551 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
KRBA1-201ENST00000319551 MLECQ14165 292 aa16.81■□□□□ 0.28
KRBA1-201ENST00000319551 GGT6Q6P531 493 aa16.8■□□□□ 0.28
KRBA1-201ENST00000319551 NUP155O75694 1391 aa16.79■□□□□ 0.28
KRBA1-201ENST00000319551 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
KRBA1-201ENST00000319551 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.27
KRBA1-201ENST00000319551 PRXQ9BXM0 1461 aa16.75■□□□□ 0.27
KRBA1-201ENST00000319551 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
KRBA1-201ENST00000319551 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
KRBA1-201ENST00000319551 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.26
KRBA1-201ENST00000319551 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
KRBA1-201ENST00000319551 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
KRBA1-201ENST00000319551 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
KRBA1-201ENST00000319551 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
KRBA1-201ENST00000319551 MYT1Q01538 1121 aa16.68■□□□□ 0.26
KRBA1-201ENST00000319551 ARID4BQ4LE39 1312 aaPredicted RBP16.67■□□□□ 0.26
KRBA1-201ENST00000319551 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
KRBA1-201ENST00000319551 LRRC9Q6ZRR7 1453 aa16.66■□□□□ 0.26
KRBA1-201ENST00000319551 KIF3BO15066 747 aa16.66■□□□□ 0.26
KRBA1-201ENST00000319551 STK26Q9P289 416 aa16.64■□□□□ 0.25
KRBA1-201ENST00000319551 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
KRBA1-201ENST00000319551 CCDC18Q5T9S5 1454 aa16.62■□□□□ 0.25
KRBA1-201ENST00000319551 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
KRBA1-201ENST00000319551 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
KRBA1-201ENST00000319551 PTPRGP23470 1445 aa16.59■□□□□ 0.25
KRBA1-201ENST00000319551 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
KRBA1-201ENST00000319551 HMGXB3Q12766 1538 aa16.58■□□□□ 0.25
KRBA1-201ENST00000319551 SOX12O15370 315 aa16.58■□□□□ 0.25
KRBA1-201ENST00000319551 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.25
KRBA1-201ENST00000319551 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
KRBA1-201ENST00000319551 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms