RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
LRRC42-201ENST00000319223 ARAP1Q96P48 1450 aa27.8■■■□□ 2.04
LRRC42-201ENST00000319223 PRXQ9BXM0 1461 aa27.8■■■□□ 2.04
LRRC42-201ENST00000319223 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
LRRC42-201ENST00000319223 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
LRRC42-201ENST00000319223 KIAA0586Q9BVV6 1533 aa27.79■■■□□ 2.04
LRRC42-201ENST00000319223 CYB5RLQ6IPT4 315 aa27.78■■■□□ 2.04
LRRC42-201ENST00000319223 EEA1Q15075 1411 aa27.76■■■□□ 2.03
LRRC42-201ENST00000319223 PRG4Q92954 1404 aaPredicted RBP27.71■■■□□ 2.03
LRRC42-201ENST00000319223 IQGAP2Q13576 1575 aa27.63■■■□□ 2.01
LRRC42-201ENST00000319223 CTTNBP2Q8WZ74 1663 aa27.55■■■□□ 2
LRRC42-201ENST00000319223 KIF21BO75037 1637 aa27.5■■□□□ 1.99
LRRC42-201ENST00000319223 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
LRRC42-201ENST00000319223 UGGT2Q9NYU1 1516 aa27.49■■□□□ 1.99
LRRC42-201ENST00000319223 DISP1Q96F81 1524 aa27.48■■□□□ 1.99
LRRC42-201ENST00000319223 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.98
LRRC42-201ENST00000319223 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
LRRC42-201ENST00000319223 TNIKQ9UKE5 1360 aa27.39■■□□□ 1.98
LRRC42-201ENST00000319223 PTPRGP23470 1445 aa27.38■■□□□ 1.97
LRRC42-201ENST00000319223 KIAA0556O60303 1618 aa27.38■■□□□ 1.97
LRRC42-201ENST00000319223 GOLGA3Q08378 1498 aa27.35■■□□□ 1.97
LRRC42-201ENST00000319223 UBTFP17480 764 aaKnown RBP27.33■■□□□ 1.96
LRRC42-201ENST00000319223 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.96
LRRC42-201ENST00000319223 P3H3Q8IVL6 736 aa27.29■■□□□ 1.96
LRRC42-201ENST00000319223 ADCY10Q96PN6 1610 aa27.28■■□□□ 1.96
LRRC42-201ENST00000319223 SAMD9Q5K651 1589 aa27.22■■□□□ 1.95
LRRC42-201ENST00000319223 UACAQ9BZF9 1416 aa27.19■■□□□ 1.94
LRRC42-201ENST00000319223 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
LRRC42-201ENST00000319223 PLB1Q6P1J6 1458 aa27.15■■□□□ 1.94
LRRC42-201ENST00000319223 UHRF1BP1LA0JNW5 1464 aa27.15■■□□□ 1.94
LRRC42-201ENST00000319223 NPM1P06748 294 aaKnown RBP eCLIP27.14■■□□□ 1.94
LRRC42-201ENST00000319223 ABCC2Q92887 1545 aa27.13■■□□□ 1.93
LRRC42-201ENST00000319223 FHOD3Q2V2M9 1422 aa27.12■■□□□ 1.93
LRRC42-201ENST00000319223 ABCA8O94911 1581 aa27.09■■□□□ 1.93
LRRC42-201ENST00000319223 EFCAB5A4FU69 1503 aa27.08■■□□□ 1.93
LRRC42-201ENST00000319223 ARHGAP35Q9NRY4 1499 aa27.05■■□□□ 1.92
LRRC42-201ENST00000319223 MAPKBP1O60336 1514 aa27.04■■□□□ 1.92
LRRC42-201ENST00000319223 KDM5BQ9UGL1 1544 aa27.03■■□□□ 1.92
LRRC42-201ENST00000319223 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
LRRC42-201ENST00000319223 ZCCHC11Q5TAX3 1644 aaKnown RBP26.98■■□□□ 1.91
LRRC42-201ENST00000319223 ARID3CA6NKF2 412 aa26.97■■□□□ 1.91
LRRC42-201ENST00000319223 ASXL2Q76L83 1435 aa26.95■■□□□ 1.9
LRRC42-201ENST00000319223 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
LRRC42-201ENST00000319223 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
LRRC42-201ENST00000319223 KIF13AQ9H1H9 1805 aa26.92■■□□□ 1.9
LRRC42-201ENST00000319223 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
LRRC42-201ENST00000319223 ATP10BO94823 1461 aa26.9■■□□□ 1.9
LRRC42-201ENST00000319223 CLIP1P30622 1438 aa26.89■■□□□ 1.9
LRRC42-201ENST00000319223 NUP153P49790 1475 aaKnown RBP26.89■■□□□ 1.89
LRRC42-201ENST00000319223 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
LRRC42-201ENST00000319223 FMN1Q68DA7 1419 aa26.84■■□□□ 1.89
LRRC42-201ENST00000319223 CEP162Q5TB80 1403 aa26.8■■□□□ 1.88
LRRC42-201ENST00000319223 WDR7Q9Y4E6 1490 aa26.8■■□□□ 1.88
LRRC42-201ENST00000319223 EPRSP07814 1512 aaKnown RBP26.79■■□□□ 1.88
LRRC42-201ENST00000319223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
LRRC42-201ENST00000319223 HNRNPUL2Q1KMD3 747 aaKnown RBP26.78■■□□□ 1.88
LRRC42-201ENST00000319223 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
LRRC42-201ENST00000319223 KCNH8Q96L42 1107 aa26.76■■□□□ 1.87
LRRC42-201ENST00000319223 GLI2P10070 1586 aa26.73■■□□□ 1.87
LRRC42-201ENST00000319223 CDK13Q14004 1512 aaKnown RBP26.73■■□□□ 1.87
LRRC42-201ENST00000319223 HECW1Q76N89 1606 aa26.7■■□□□ 1.86
LRRC42-201ENST00000319223 PCF11O94913 1555 aaKnown RBP26.69■■□□□ 1.86
LRRC42-201ENST00000319223 TSPOAP1O95153 1857 aa26.68■■□□□ 1.86
LRRC42-201ENST00000319223 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
LRRC42-201ENST00000319223 LRRIQ1Q96JM4 1722 aa26.65■■□□□ 1.86
LRRC42-201ENST00000319223 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.85
LRRC42-201ENST00000319223 MAP3K4Q9Y6R4 1608 aa26.64■■□□□ 1.85
LRRC42-201ENST00000319223 PPRC1Q5VV67 1664 aaKnown RBP26.62■■□□□ 1.85
LRRC42-201ENST00000319223 FYCO1Q9BQS8 1478 aa26.59■■□□□ 1.85
LRRC42-201ENST00000319223 CD109Q6YHK3 1445 aa26.57■■□□□ 1.84
LRRC42-201ENST00000319223 CFAP43Q8NDM7 1665 aa26.54■■□□□ 1.84
LRRC42-201ENST00000319223 ABCA9Q8IUA7 1624 aa26.53■■□□□ 1.84
LRRC42-201ENST00000319223 CCDC18Q5T9S5 1454 aa26.51■■□□□ 1.84
LRRC42-201ENST00000319223 CDK11AQ9UQ88 783 aaPredicted RBP26.51■■□□□ 1.83
LRRC42-201ENST00000319223 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
LRRC42-201ENST00000319223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
LRRC42-201ENST00000319223 TROQ12816 1431 aaPredicted RBP26.47■■□□□ 1.83
LRRC42-201ENST00000319223 TEX14Q8IWB6 1497 aa26.46■■□□□ 1.83
LRRC42-201ENST00000319223 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.83
LRRC42-201ENST00000319223 TTC37Q6PGP7 1564 aa26.43■■□□□ 1.82
LRRC42-201ENST00000319223 KIF14Q15058 1648 aa26.43■■□□□ 1.82
LRRC42-201ENST00000319223 KDM6BO15054 1643 aa26.42■■□□□ 1.82
LRRC42-201ENST00000319223 COL17A1Q9UMD9 1497 aaPredicted RBP26.42■■□□□ 1.82
LRRC42-201ENST00000319223 PLCH2O75038 1416 aa26.31■■□□□ 1.8
LRRC42-201ENST00000319223 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
LRRC42-201ENST00000319223 NEO1Q92859 1461 aa26.28■■□□□ 1.8
LRRC42-201ENST00000319223 TIAM1Q13009 1591 aa26.27■■□□□ 1.8
LRRC42-201ENST00000319223 FANCAO15360 1455 aa26.27■■□□□ 1.8
LRRC42-201ENST00000319223 ARAP3Q8WWN8 1544 aa26.26■■□□□ 1.79
LRRC42-201ENST00000319223 MYO5CQ9NQX4 1742 aa26.26■■□□□ 1.79
LRRC42-201ENST00000319223 PHLDB1Q86UU1 1377 aa26.24■■□□□ 1.79
LRRC42-201ENST00000319223 AKNAQ7Z591 1439 aa26.24■■□□□ 1.79
LRRC42-201ENST00000319223 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
LRRC42-201ENST00000319223 RAPGEF3O95398 923 aa26.21■■□□□ 1.79
LRRC42-201ENST00000319223 KANK4Q5T7N3 995 aaPredicted RBP26.21■■□□□ 1.79
LRRC42-201ENST00000319223 CDC42BPBQ9Y5S2 1711 aa26.2■■□□□ 1.78
LRRC42-201ENST00000319223 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
LRRC42-201ENST00000319223 ARHGAP5Q13017 1502 aa26.18■■□□□ 1.78
LRRC42-201ENST00000319223 MAP3K1Q13233 1512 aa26.18■■□□□ 1.78
LRRC42-201ENST00000319223 CFAP74Q9C0B2 1584 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms