RNA–Protein interactions for RNA: ENST00000312239.9

HP1BP3-201, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HP1BP3, Length 3,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-201ENST00000312239 DDX10Q13206 875 aaKnown RBP10.48□□□□□ -0.73
HP1BP3-201ENST00000312239 CDK11AQ9UQ88 783 aaPredicted RBP10.47□□□□□ -0.73
HP1BP3-201ENST00000312239 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
HP1BP3-201ENST00000312239 MIER1Q8N108 512 aa10.46□□□□□ -0.73
HP1BP3-201ENST00000312239 ZBTB22O15209 634 aa10.45□□□□□ -0.74
HP1BP3-201ENST00000312239 SIN3AQ96ST3 1273 aa10.44□□□□□ -0.74
HP1BP3-201ENST00000312239 DMRT2Q9Y5R5 561 aa10.44□□□□□ -0.74
HP1BP3-201ENST00000312239 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
HP1BP3-201ENST00000312239 CADPSQ9ULU8 1353 aa10.43□□□□□ -0.74
HP1BP3-201ENST00000312239 ANP32CO43423 234 aa10.42□□□□□ -0.74
HP1BP3-201ENST00000312239 TONSLQ96HA7 1378 aa10.42□□□□□ -0.74
HP1BP3-201ENST00000312239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.743e-8■■□□□ 13.5
HP1BP3-201ENST00000312239 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
HP1BP3-201ENST00000312239 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
HP1BP3-201ENST00000312239 ERCC6Q03468 1493 aa10.39□□□□□ -0.75
HP1BP3-201ENST00000312239 EIF4G1Q04637 1599 aaKnown RBP10.38□□□□□ -0.75
HP1BP3-201ENST00000312239 DNAJC5BQ9UF47 199 aa10.38□□□□□ -0.75
HP1BP3-201ENST00000312239 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
HP1BP3-201ENST00000312239 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
HP1BP3-201ENST00000312239 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
HP1BP3-201ENST00000312239 FHOD3Q2V2M9 1422 aa10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 TSPY4P0CV99 314 aa10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 TSPY10P0CW01 314 aa10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 ERICH6Q7L0X2 663 aa10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
HP1BP3-201ENST00000312239 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
HP1BP3-201ENST00000312239 BICRAQ9NZM4 1560 aa10.31□□□□□ -0.76
HP1BP3-201ENST00000312239 FANCD2Q9BXW9 1451 aa10.31□□□□□ -0.76
HP1BP3-201ENST00000312239 CHGAP10645 457 aaKnown RBP10.31□□□□□ -0.76
HP1BP3-201ENST00000312239 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
HP1BP3-201ENST00000312239 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
HP1BP3-201ENST00000312239 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
HP1BP3-201ENST00000312239 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
HP1BP3-201ENST00000312239 NESP48681 1621 aa10.28□□□□□ -0.76
HP1BP3-201ENST00000312239 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
HP1BP3-201ENST00000312239 NCAPD3P42695 1498 aa10.28□□□□□ -0.76
HP1BP3-201ENST00000312239 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
HP1BP3-201ENST00000312239 IGF1RP08069 1367 aa10.27□□□□□ -0.77
HP1BP3-201ENST00000312239 FHAD1B1AJZ9 1412 aa10.27□□□□□ -0.77
HP1BP3-201ENST00000312239 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
HP1BP3-201ENST00000312239 HOXD11P31277 338 aaPredicted RBP10.26□□□□□ -0.77
HP1BP3-201ENST00000312239 HNRNPUQ00839 825 aaKnown RBP eCLIP10.26□□□□□ -0.77
HP1BP3-201ENST00000312239 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
HP1BP3-201ENST00000312239 DCAF8L1A6NGE4 600 aa10.24□□□□□ -0.77
HP1BP3-201ENST00000312239 RAB3GAP2Q9H2M9 1393 aa10.23□□□□□ -0.77
HP1BP3-201ENST00000312239 FKBP8Q14318 412 aa10.22□□□□□ -0.77
HP1BP3-201ENST00000312239 IRX6P78412 446 aaPredicted RBP10.21□□□□□ -0.78
HP1BP3-201ENST00000312239 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
HP1BP3-201ENST00000312239 EIF4G2P78344 907 aaKnown RBP eCLIP10.19□□□□□ -0.781e-15■■□□□ 12.2
HP1BP3-201ENST00000312239 SLC4A2P04920 1241 aa10.19□□□□□ -0.78
HP1BP3-201ENST00000312239 ARHGAP35Q9NRY4 1499 aa10.18□□□□□ -0.78
HP1BP3-201ENST00000312239 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
HP1BP3-201ENST00000312239 CFTRP13569 1480 aa10.18□□□□□ -0.78
HP1BP3-201ENST00000312239 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.785e-8■■■■□ 23.3
HP1BP3-201ENST00000312239 MRS2Q9HD23 443 aa10.17□□□□□ -0.78
HP1BP3-201ENST00000312239 CC2D2AQ9P2K1 1620 aa10.16□□□□□ -0.78
HP1BP3-201ENST00000312239 CUX1P39880 1505 aa10.16□□□□□ -0.78
HP1BP3-201ENST00000312239 KIF21BO75037 1637 aa10.16□□□□□ -0.78
HP1BP3-201ENST00000312239 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
HP1BP3-201ENST00000312239 ARAP1Q96P48 1450 aa10.15□□□□□ -0.78
HP1BP3-201ENST00000312239 FMN1Q68DA7 1419 aa10.15□□□□□ -0.78
HP1BP3-201ENST00000312239 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
HP1BP3-201ENST00000312239 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
HP1BP3-201ENST00000312239 TMC1Q8TDI8 760 aa10.12□□□□□ -0.79
HP1BP3-201ENST00000312239 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
HP1BP3-201ENST00000312239 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
HP1BP3-201ENST00000312239 HNRNPMP52272 730 aaKnown RBP eCLIP10.11□□□□□ -0.794e-10■■□□□ 13.6
HP1BP3-201ENST00000312239 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
HP1BP3-201ENST00000312239 ZNF644Q9H582 1327 aaPredicted RBP10.11□□□□□ -0.79
HP1BP3-201ENST00000312239 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
HP1BP3-201ENST00000312239 PKD2Q13563 968 aa10.1□□□□□ -0.79
HP1BP3-201ENST00000312239 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
HP1BP3-201ENST00000312239 DCAF11Q8TEB1 546 aa10.1□□□□□ -0.79
HP1BP3-201ENST00000312239 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
HP1BP3-201ENST00000312239 TOP2BQ02880 1626 aa10.08□□□□□ -0.8
HP1BP3-201ENST00000312239 PRXQ9BXM0 1461 aa10.08□□□□□ -0.8
HP1BP3-201ENST00000312239 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
HP1BP3-201ENST00000312239 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
HP1BP3-201ENST00000312239 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
HP1BP3-201ENST00000312239 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
HP1BP3-201ENST00000312239 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
HP1BP3-201ENST00000312239 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
HP1BP3-201ENST00000312239 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
HP1BP3-201ENST00000312239 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
HP1BP3-201ENST00000312239 NUP155O75694 1391 aa10.03□□□□□ -0.8
HP1BP3-201ENST00000312239 SUPT16HQ9Y5B9 1047 aaKnown RBP10.02□□□□□ -0.8
HP1BP3-201ENST00000312239 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
HP1BP3-201ENST00000312239 GGT6Q6P531 493 aa10.01□□□□□ -0.81
HP1BP3-201ENST00000312239 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
HP1BP3-201ENST00000312239 DAXXQ9UER7 740 aaPredicted RBP10.01□□□□□ -0.81
HP1BP3-201ENST00000312239 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
HP1BP3-201ENST00000312239 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
HP1BP3-201ENST00000312239 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
HP1BP3-201ENST00000312239 MLECQ14165 292 aa10□□□□□ -0.81
HP1BP3-201ENST00000312239 CC2D1BQ5T0F9 858 aaKnown RBP10□□□□□ -0.81
HP1BP3-201ENST00000312239 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
HP1BP3-201ENST00000312239 TNNT2P45379 298 aaPredicted RBP9.98□□□□□ -0.81
HP1BP3-201ENST00000312239 PEG3Q9GZU2 1588 aa9.98□□□□□ -0.81
HP1BP3-201ENST00000312239 NPM2Q86SE8 214 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms