RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
MSL3-201ENST00000312196 KIAA0586Q9BVV6 1533 aa14.74□□□□□ -0.05
MSL3-201ENST00000312196 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
MSL3-201ENST00000312196 IGF1RP08069 1367 aa14.73□□□□□ -0.05
MSL3-201ENST00000312196 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
MSL3-201ENST00000312196 KIF13AQ9H1H9 1805 aa14.67□□□□□ -0.06
MSL3-201ENST00000312196 AEBP2Q6ZN18 517 aaPredicted RBP14.64□□□□□ -0.07
MSL3-201ENST00000312196 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
MSL3-201ENST00000312196 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
MSL3-201ENST00000312196 DIP2BQ9P265 1576 aa14.61□□□□□ -0.07
MSL3-201ENST00000312196 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
MSL3-201ENST00000312196 ADCY10Q96PN6 1610 aa14.6□□□□□ -0.07
MSL3-201ENST00000312196 GLI2P10070 1586 aa14.58□□□□□ -0.08
MSL3-201ENST00000312196 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
MSL3-201ENST00000312196 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
MSL3-201ENST00000312196 IQGAP2Q13576 1575 aa14.54□□□□□ -0.08
MSL3-201ENST00000312196 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
MSL3-201ENST00000312196 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
MSL3-201ENST00000312196 UGGT2Q9NYU1 1516 aa14.53□□□□□ -0.08
MSL3-201ENST00000312196 PTPRGP23470 1445 aa14.53□□□□□ -0.08
MSL3-201ENST00000312196 ABCC2Q92887 1545 aa14.52□□□□□ -0.08
MSL3-201ENST00000312196 FAM69CQ0P6D2 419 aa14.52□□□□□ -0.08
MSL3-201ENST00000312196 KDM6BO15054 1643 aa14.47□□□□□ -0.09
MSL3-201ENST00000312196 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.09
MSL3-201ENST00000312196 UACAQ9BZF9 1416 aa14.46□□□□□ -0.09
MSL3-201ENST00000312196 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
MSL3-201ENST00000312196 DISP1Q96F81 1524 aa14.45□□□□□ -0.1
MSL3-201ENST00000312196 CTTNBP2Q8WZ74 1663 aa14.45□□□□□ -0.1
MSL3-201ENST00000312196 EEA1Q15075 1411 aa14.44□□□□□ -0.1
MSL3-201ENST00000312196 GOLGA3Q08378 1498 aa14.42□□□□□ -0.1
MSL3-201ENST00000312196 KIAA0556O60303 1618 aa14.41□□□□□ -0.1
MSL3-201ENST00000312196 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
MSL3-201ENST00000312196 TEX14Q8IWB6 1497 aa14.41□□□□□ -0.1
MSL3-201ENST00000312196 PPRC1Q5VV67 1664 aaKnown RBP14.38□□□□□ -0.11
MSL3-201ENST00000312196 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
MSL3-201ENST00000312196 EPRSP07814 1512 aaKnown RBP14.37□□□□□ -0.11
MSL3-201ENST00000312196 MAGI3Q5TCQ9 1506 aa14.33□□□□□ -0.12
MSL3-201ENST00000312196 ABCA8O94911 1581 aa14.32□□□□□ -0.12
MSL3-201ENST00000312196 ZCCHC11Q5TAX3 1644 aaKnown RBP14.32□□□□□ -0.12
MSL3-201ENST00000312196 KDM4FA0A1W2PPD8 638 aa14.31□□□□□ -0.12
MSL3-201ENST00000312196 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
MSL3-201ENST00000312196 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
MSL3-201ENST00000312196 CFAP43Q8NDM7 1665 aa14.29□□□□□ -0.12
MSL3-201ENST00000312196 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
MSL3-201ENST00000312196 TSPOAP1O95153 1857 aa14.28□□□□□ -0.12
MSL3-201ENST00000312196 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
MSL3-201ENST00000312196 KIF21BO75037 1637 aa14.26□□□□□ -0.13
MSL3-201ENST00000312196 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
MSL3-201ENST00000312196 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
MSL3-201ENST00000312196 ADGRL1O94910 1474 aa14.22□□□□□ -0.13
MSL3-201ENST00000312196 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
MSL3-201ENST00000312196 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
MSL3-201ENST00000312196 CD109Q6YHK3 1445 aa14.19□□□□□ -0.14
MSL3-201ENST00000312196 RAPGEF6Q8TEU7 1601 aa14.15□□□□□ -0.14
MSL3-201ENST00000312196 ABCA9Q8IUA7 1624 aa14.14□□□□□ -0.15
MSL3-201ENST00000312196 NEO1Q92859 1461 aa14.14□□□□□ -0.15
MSL3-201ENST00000312196 ATP10BO94823 1461 aa14.13□□□□□ -0.15
MSL3-201ENST00000312196 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
MSL3-201ENST00000312196 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
MSL3-201ENST00000312196 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
MSL3-201ENST00000312196 CFAP74Q9C0B2 1584 aa14.04□□□□□ -0.16
MSL3-201ENST00000312196 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
MSL3-201ENST00000312196 ADAMTSL3P82987 1691 aa14.03□□□□□ -0.16
MSL3-201ENST00000312196 FHOD3Q2V2M9 1422 aa14□□□□□ -0.17
MSL3-201ENST00000312196 FMN1Q68DA7 1419 aa14□□□□□ -0.17
MSL3-201ENST00000312196 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
MSL3-201ENST00000312196 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
MSL3-201ENST00000312196 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
MSL3-201ENST00000312196 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
MSL3-201ENST00000312196 FRMPD1Q5SYB0 1578 aa13.97□□□□□ -0.17
MSL3-201ENST00000312196 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
MSL3-201ENST00000312196 BCORL1Q5H9F3 1711 aa13.95□□□□□ -0.18
MSL3-201ENST00000312196 DENND4BO75064 1496 aaPredicted RBP13.95□□□□□ -0.18
MSL3-201ENST00000312196 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
MSL3-201ENST00000312196 PTPRMP28827 1452 aa13.94□□□□□ -0.18
MSL3-201ENST00000312196 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
MSL3-201ENST00000312196 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
MSL3-201ENST00000312196 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
MSL3-201ENST00000312196 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
MSL3-201ENST00000312196 RICTORQ6R327 1708 aa13.91□□□□□ -0.18
MSL3-201ENST00000312196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.91□□□□□ -0.18
MSL3-201ENST00000312196 POGZQ7Z3K3 1410 aa13.91□□□□□ -0.18
MSL3-201ENST00000312196 FANCAO15360 1455 aa13.88□□□□□ -0.19
MSL3-201ENST00000312196 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
MSL3-201ENST00000312196 PLCH2O75038 1416 aa13.88□□□□□ -0.19
MSL3-201ENST00000312196 CASKIN1Q8WXD9 1431 aa13.87□□□□□ -0.19
MSL3-201ENST00000312196 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
MSL3-201ENST00000312196 PCF11O94913 1555 aaKnown RBP13.86□□□□□ -0.19
MSL3-201ENST00000312196 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
MSL3-201ENST00000312196 TTC37Q6PGP7 1564 aa13.85□□□□□ -0.19
MSL3-201ENST00000312196 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
MSL3-201ENST00000312196 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
MSL3-201ENST00000312196 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.19
MSL3-201ENST00000312196 KIF14Q15058 1648 aa13.83□□□□□ -0.19
MSL3-201ENST00000312196 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
MSL3-201ENST00000312196 CDK13Q14004 1512 aaKnown RBP13.83□□□□□ -0.2
MSL3-201ENST00000312196 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
MSL3-201ENST00000312196 RAPGEF3O95398 923 aa13.83□□□□□ -0.2
MSL3-201ENST00000312196 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
MSL3-201ENST00000312196 MADDQ8WXG6 1647 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms