RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
SPSB4-201ENST00000310546 FGD5Q6ZNL6 1462 aa25.8■■□□□ 1.72
SPSB4-201ENST00000310546 CLIP1P30622 1438 aa25.8■■□□□ 1.72
SPSB4-201ENST00000310546 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
SPSB4-201ENST00000310546 CUX2O14529 1486 aa25.78■■□□□ 1.72
SPSB4-201ENST00000310546 ITGAEP38570 1179 aa25.77■■□□□ 1.72
SPSB4-201ENST00000310546 WDR62O43379 1518 aa25.77■■□□□ 1.72
SPSB4-201ENST00000310546 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
SPSB4-201ENST00000310546 NEFLP07196 543 aa25.72■■□□□ 1.71
SPSB4-201ENST00000310546 PRKCSHP14314 528 aaPredicted RBP25.72■■□□□ 1.71
SPSB4-201ENST00000310546 DHX57Q6P158 1386 aaKnown RBP25.71■■□□□ 1.71
SPSB4-201ENST00000310546 MSH5O43196 834 aa25.7■■□□□ 1.7
SPSB4-201ENST00000310546 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
SPSB4-201ENST00000310546 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SPSB4-201ENST00000310546 P3H3Q8IVL6 736 aa25.65■■□□□ 1.7
SPSB4-201ENST00000310546 IGF1RP08069 1367 aa25.64■■□□□ 1.69
SPSB4-201ENST00000310546 VPS8Q8N3P4 1428 aa25.6■■□□□ 1.69
SPSB4-201ENST00000310546 ERICH6Q7L0X2 663 aa25.59■■□□□ 1.69
SPSB4-201ENST00000310546 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
SPSB4-201ENST00000310546 TRIM52Q96A61 297 aa25.53■■□□□ 1.68
SPSB4-201ENST00000310546 CARMIL1Q5VZK9 1371 aa25.53■■□□□ 1.68
SPSB4-201ENST00000310546 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
SPSB4-201ENST00000310546 DDX10Q13206 875 aaKnown RBP25.5■■□□□ 1.67
SPSB4-201ENST00000310546 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
SPSB4-201ENST00000310546 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
SPSB4-201ENST00000310546 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
SPSB4-201ENST00000310546 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
SPSB4-201ENST00000310546 FANCIQ9NVI1 1328 aa25.39■■□□□ 1.65
SPSB4-201ENST00000310546 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
SPSB4-201ENST00000310546 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
SPSB4-201ENST00000310546 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
SPSB4-201ENST00000310546 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
SPSB4-201ENST00000310546 DEKP35659 375 aaKnown RBP25.33■■□□□ 1.64
SPSB4-201ENST00000310546 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
SPSB4-201ENST00000310546 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
SPSB4-201ENST00000310546 IRX6P78412 446 aaPredicted RBP25.29■■□□□ 1.64
SPSB4-201ENST00000310546 EIF4G3O43432 1585 aaKnown RBP25.28■■□□□ 1.64
SPSB4-201ENST00000310546 FBLN2P98095 1184 aa25.27■■□□□ 1.64
SPSB4-201ENST00000310546 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
SPSB4-201ENST00000310546 HIRIP3Q9BW71 556 aaPredicted RBP25.26■■□□□ 1.63
SPSB4-201ENST00000310546 CUL7Q14999 1698 aa25.25■■□□□ 1.63
SPSB4-201ENST00000310546 ARID3CA6NKF2 412 aa25.23■■□□□ 1.63
SPSB4-201ENST00000310546 MYT1LQ9UL68 1186 aa25.22■■□□□ 1.63
SPSB4-201ENST00000310546 ANP32CO43423 234 aa25.22■■□□□ 1.63
SPSB4-201ENST00000310546 PBRM1Q86U86 1689 aa25.2■■□□□ 1.62
SPSB4-201ENST00000310546 PPP1R15AO75807 674 aaPredicted RBP25.19■■□□□ 1.62
SPSB4-201ENST00000310546 ANO8Q9HCE9 1232 aaPredicted RBP25.16■■□□□ 1.62
SPSB4-201ENST00000310546 CCER2I3L3R5 266 aa25.16■■□□□ 1.62
SPSB4-201ENST00000310546 GRIN2BQ13224 1484 aa25.14■■□□□ 1.61
SPSB4-201ENST00000310546 CTTNBP2Q8WZ74 1663 aa25.12■■□□□ 1.61
SPSB4-201ENST00000310546 NBR1Q14596 966 aa25.12■■□□□ 1.61
SPSB4-201ENST00000310546 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
SPSB4-201ENST00000310546 FHOD3Q2V2M9 1422 aa25.1■■□□□ 1.61
SPSB4-201ENST00000310546 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
SPSB4-201ENST00000310546 CCNB3Q8WWL7 1395 aa25.07■■□□□ 1.6
SPSB4-201ENST00000310546 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
SPSB4-201ENST00000310546 SNAPC4Q5SXM2 1469 aa25.06■■□□□ 1.6
SPSB4-201ENST00000310546 HNRNPUQ00839 825 aaKnown RBP eCLIP25.06■■□□□ 1.6
SPSB4-201ENST00000310546 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
SPSB4-201ENST00000310546 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
SPSB4-201ENST00000310546 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
SPSB4-201ENST00000310546 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
SPSB4-201ENST00000310546 TIAM1Q13009 1591 aa24.99■■□□□ 1.59
SPSB4-201ENST00000310546 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
SPSB4-201ENST00000310546 EFCAB5A4FU69 1503 aa24.98■■□□□ 1.59
SPSB4-201ENST00000310546 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
SPSB4-201ENST00000310546 NOP58Q9Y2X3 529 aaKnown RBP24.95■■□□□ 1.58
SPSB4-201ENST00000310546 SALL2Q9Y467 1007 aaPredicted RBP24.93■■□□□ 1.58
SPSB4-201ENST00000310546 PPP4R2Q9NY27 417 aa24.92■■□□□ 1.58
SPSB4-201ENST00000310546 MAP3K1Q13233 1512 aa24.91■■□□□ 1.58
SPSB4-201ENST00000310546 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
SPSB4-201ENST00000310546 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
SPSB4-201ENST00000310546 B4GALNT3Q6L9W6 998 aa24.9■■□□□ 1.58
SPSB4-201ENST00000310546 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.57
SPSB4-201ENST00000310546 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
SPSB4-201ENST00000310546 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
SPSB4-201ENST00000310546 CHD1O14646 1710 aa24.85■■□□□ 1.57
SPSB4-201ENST00000310546 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
SPSB4-201ENST00000310546 CFAP43Q8NDM7 1665 aa24.85■■□□□ 1.57
SPSB4-201ENST00000310546 CASKIN1Q8WXD9 1431 aa24.84■■□□□ 1.57
SPSB4-201ENST00000310546 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
SPSB4-201ENST00000310546 CCDC136Q96JN2 1154 aa24.83■■□□□ 1.57
SPSB4-201ENST00000310546 FMN1Q68DA7 1419 aa24.83■■□□□ 1.57
SPSB4-201ENST00000310546 SETD5Q9C0A6 1442 aa24.83■■□□□ 1.57
SPSB4-201ENST00000310546 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
SPSB4-201ENST00000310546 RTL5Q5HYW3 569 aaPredicted RBP24.79■■□□□ 1.56
SPSB4-201ENST00000310546 RTN4Q9NQC3 1192 aaKnown RBP24.79■■□□□ 1.56
SPSB4-201ENST00000310546 PHLDB1Q86UU1 1377 aa24.78■■□□□ 1.56
SPSB4-201ENST00000310546 IL27Q8NEV9 243 aa24.76■■□□□ 1.55
SPSB4-201ENST00000310546 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
SPSB4-201ENST00000310546 TIMELESSQ9UNS1 1208 aa24.75■■□□□ 1.55
SPSB4-201ENST00000310546 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SPSB4-201ENST00000310546 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
SPSB4-201ENST00000310546 NUP160Q12769 1436 aa24.69■■□□□ 1.54
SPSB4-201ENST00000310546 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.66■■□□□ 1.54
SPSB4-201ENST00000310546 ANP32AP39687 249 aaKnown RBP24.66■■□□□ 1.54
SPSB4-201ENST00000310546 TONSLQ96HA7 1378 aa24.64■■□□□ 1.53
SPSB4-201ENST00000310546 JPH4Q96JJ6 628 aa24.63■■□□□ 1.53
SPSB4-201ENST00000310546 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
SPSB4-201ENST00000310546 ZBTB47Q9UFB7 747 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms