RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 CDK11AQ9UQ88 783 aaPredicted RBP7.53□□□□□ -1.2
USP8-201ENST00000307179 POLR1AO95602 1720 aaPredicted RBP7.53□□□□□ -1.2
USP8-201ENST00000307179 PPP1R15AO75807 674 aaPredicted RBP7.53□□□□□ -1.2
USP8-201ENST00000307179 KIF27Q86VH2 1401 aa7.52□□□□□ -1.21
USP8-201ENST00000307179 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.21
USP8-201ENST00000307179 ANP32CO43423 234 aa7.52□□□□□ -1.21
USP8-201ENST00000307179 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
USP8-201ENST00000307179 HMGXB3Q12766 1538 aa7.51□□□□□ -1.21
USP8-201ENST00000307179 FHAD1B1AJZ9 1412 aa7.5□□□□□ -1.21
USP8-201ENST00000307179 LRRC9Q6ZRR7 1453 aa7.5□□□□□ -1.21
USP8-201ENST00000307179 EFCAB5A4FU69 1503 aa7.49□□□□□ -1.21
USP8-201ENST00000307179 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■□□ 16
USP8-201ENST00000307179 ABCA5Q8WWZ7 1642 aa7.48□□□□□ -1.21
USP8-201ENST00000307179 KIF21AQ7Z4S6 1674 aa7.47□□□□□ -1.21
USP8-201ENST00000307179 FYCO1Q9BQS8 1478 aa7.47□□□□□ -1.21
USP8-201ENST00000307179 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
USP8-201ENST00000307179 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.21
USP8-201ENST00000307179 MSH5O43196 834 aa7.46□□□□□ -1.22
USP8-201ENST00000307179 CUX1P39880 1505 aa7.46□□□□□ -1.22
USP8-201ENST00000307179 THOC2Q8NI27 1593 aaKnown RBP7.46□□□□□ -1.22
USP8-201ENST00000307179 BCANQ96GW7 911 aa7.45□□□□□ -1.22
USP8-201ENST00000307179 HECW1Q76N89 1606 aa7.45□□□□□ -1.22
USP8-201ENST00000307179 GCC2Q8IWJ2 1684 aa7.45□□□□□ -1.22
USP8-201ENST00000307179 KANK4Q5T7N3 995 aaPredicted RBP7.44□□□□□ -1.22
USP8-201ENST00000307179 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
USP8-201ENST00000307179 PRKCSHP14314 528 aaPredicted RBP7.44□□□□□ -1.22
USP8-201ENST00000307179 CTTNBP2Q8WZ74 1663 aa7.43□□□□□ -1.22
USP8-201ENST00000307179 UACAQ9BZF9 1416 aa7.43□□□□□ -1.22
USP8-201ENST00000307179 PTPN23Q9H3S7 1636 aa7.43□□□□□ -1.22
USP8-201ENST00000307179 CCDC18Q5T9S5 1454 aa7.42□□□□□ -1.22
USP8-201ENST00000307179 DDX10Q13206 875 aaKnown RBP7.42□□□□□ -1.22
USP8-201ENST00000307179 NCAPD3P42695 1498 aa7.42□□□□□ -1.22
USP8-201ENST00000307179 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 DEKP35659 375 aaKnown RBP7.41□□□□□ -1.22
USP8-201ENST00000307179 HFM1A2PYH4 1435 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 AKNAQ7Z591 1439 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 CUL7Q14999 1698 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 KCNH8Q96L42 1107 aa7.41□□□□□ -1.22
USP8-201ENST00000307179 NOP58Q9Y2X3 529 aaKnown RBP7.4□□□□□ -1.22
USP8-201ENST00000307179 CNTLNQ9NXG0 1405 aa7.4□□□□□ -1.22
USP8-201ENST00000307179 CASKIN1Q8WXD9 1431 aa7.4□□□□□ -1.23
USP8-201ENST00000307179 KDM5BQ9UGL1 1544 aa7.39□□□□□ -1.23
USP8-201ENST00000307179 FGD5Q6ZNL6 1462 aa7.39□□□□□ -1.23
USP8-201ENST00000307179 CFTRP13569 1480 aa7.38□□□□□ -1.23
USP8-201ENST00000307179 ZBED9Q6R2W3 1325 aa7.38□□□□□ -1.23
USP8-201ENST00000307179 PHLDB1Q86UU1 1377 aa7.38□□□□□ -1.23
USP8-201ENST00000307179 SUPT6HQ7KZ85 1726 aaKnown RBP7.38□□□□□ -1.23
USP8-201ENST00000307179 USP35Q9P2H5 1018 aa7.37□□□□□ -1.23
USP8-201ENST00000307179 FGD6Q6ZV73 1430 aa7.36□□□□□ -1.23
USP8-201ENST00000307179 EHBP1L1Q8N3D4 1523 aa7.36□□□□□ -1.23
USP8-201ENST00000307179 SMG6Q86US8 1419 aaKnown RBP7.36□□□□□ -1.23
USP8-201ENST00000307179 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
USP8-201ENST00000307179 ANP32AP39687 249 aaKnown RBP7.35□□□□□ -1.23
USP8-201ENST00000307179 TRIM52Q96A61 297 aa7.35□□□□□ -1.23
USP8-201ENST00000307179 FMN1Q68DA7 1419 aa7.35□□□□□ -1.23
USP8-201ENST00000307179 ITGAEP38570 1179 aa7.35□□□□□ -1.23
USP8-201ENST00000307179 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP8-201ENST00000307179 NCOA1Q15788 1441 aa7.33□□□□□ -1.24
USP8-201ENST00000307179 TCOF1Q13428 1488 aaKnown RBP7.33□□□□□ -1.24
USP8-201ENST00000307179 SAMD9Q5K651 1589 aa7.33□□□□□ -1.24
USP8-201ENST00000307179 RNF123Q5XPI4 1314 aa7.33□□□□□ -1.24
USP8-201ENST00000307179 IPO9Q96P70 1041 aaKnown RBP7.32□□□□□ -1.24
USP8-201ENST00000307179 ARHGEF11O15085 1522 aa7.32□□□□□ -1.24
USP8-201ENST00000307179 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
USP8-201ENST00000307179 WASHC2AQ641Q2 1341 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 IGF1RP08069 1367 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 SNAPC4Q5SXM2 1469 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 MYOM3Q5VTT5 1437 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 CARMIL1Q5VZK9 1371 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 SIN3AQ96ST3 1273 aa7.31□□□□□ -1.24
USP8-201ENST00000307179 NAIPQ13075 1403 aa7.3□□□□□ -1.24
USP8-201ENST00000307179 UGGT2Q9NYU1 1516 aa7.3□□□□□ -1.24
USP8-201ENST00000307179 MIA2Q96PC5 1412 aa7.3□□□□□ -1.24
USP8-201ENST00000307179 ARID4BQ4LE39 1312 aaPredicted RBP7.29□□□□□ -1.24
USP8-201ENST00000307179 ZMYM4Q5VZL5 1548 aa7.29□□□□□ -1.24
USP8-201ENST00000307179 LRRIQ1Q96JM4 1722 aa7.29□□□□□ -1.24
USP8-201ENST00000307179 KTN1Q86UP2 1357 aaKnown RBP7.29□□□□□ -1.24
USP8-201ENST00000307179 PPM1GO15355 546 aaPredicted RBP7.28□□□□□ -1.24
USP8-201ENST00000307179 ZBTB47Q9UFB7 747 aaPredicted RBP7.28□□□□□ -1.24
USP8-201ENST00000307179 CCDC7Q96M83 1385 aa7.28□□□□□ -1.24
USP8-201ENST00000307179 FAM50AQ14320 339 aaKnown RBP7.28□□□□□ -1.24
USP8-201ENST00000307179 EIF4G2P78344 907 aaKnown RBP eCLIP7.28□□□□□ -1.24
USP8-201ENST00000307179 KIF14Q15058 1648 aa7.27□□□□□ -1.25
USP8-201ENST00000307179 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
USP8-201ENST00000307179 WASHC2CQ9Y4E1 1318 aa7.27□□□□□ -1.25
USP8-201ENST00000307179 DNMBPQ6XZF7 1577 aa7.27□□□□□ -1.25
USP8-201ENST00000307179 GRIN2BQ13224 1484 aa7.27□□□□□ -1.25
USP8-201ENST00000307179 INSRP06213 1382 aa7.26□□□□□ -1.25
USP8-201ENST00000307179 MS4A1P11836 297 aa7.26□□□□□ -1.25
USP8-201ENST00000307179 PRKRIP1Q9H875 184 aaPredicted RBP7.26□□□□□ -1.25
USP8-201ENST00000307179 NUDCQ9Y266 331 aa7.26□□□□□ -1.25
USP8-201ENST00000307179 ROCK2O75116 1388 aaKnown RBP7.26□□□□□ -1.25
USP8-201ENST00000307179 TCERG1O14776 1098 aaKnown RBP7.25□□□□□ -1.25
USP8-201ENST00000307179 UBE2Q2Q8WVN8 375 aa7.25□□□□□ -1.25
USP8-201ENST00000307179 RANGAP1P46060 587 aaPredicted RBP7.25□□□□□ -1.25
USP8-201ENST00000307179 DDRGK1Q96HY6 314 aa7.25□□□□□ -1.25
USP8-201ENST00000307179 RPRD2Q5VT52 1461 aaKnown RBP7.25□□□□□ -1.25
USP8-201ENST00000307179 TEX14Q8IWB6 1497 aa7.24□□□□□ -1.25
USP8-201ENST00000307179 E9PCH4 1651 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms