RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 NISCHQ9Y2I1 1504 aa10.38□□□□□ -0.75
USP8-201ENST00000307179 HRCP23327 699 aa9.04□□□□□ -0.96
USP8-201ENST00000307179 PELP1Q8IZL8 1130 aaKnown RBP9□□□□□ -0.97
USP8-201ENST00000307179 CCDC180Q9P1Z9 1646 aa8.93□□□□□ -0.98
USP8-201ENST00000307179 DCAF1Q9Y4B6 1507 aa8.9□□□□□ -0.98
USP8-201ENST00000307179 ZCCHC6Q5VYS8 1495 aaKnown RBP8.88□□□□□ -0.99
USP8-201ENST00000307179 MYT1Q01538 1121 aa8.78□□□□□ -1
USP8-201ENST00000307179 MYO15BQ96JP2 1530 aa8.77□□□□□ -1.01
USP8-201ENST00000307179 ZEB1P37275 1124 aaPredicted RBP8.72□□□□□ -1.01
USP8-201ENST00000307179 CHIC1Q5VXU3 224 aa8.72□□□□□ -1.01
USP8-201ENST00000307179 SHROOM4Q9ULL8 1493 aa8.68□□□□□ -1.02
USP8-201ENST00000307179 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
USP8-201ENST00000307179 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
USP8-201ENST00000307179 TRIM26Q12899 539 aaPredicted RBP8.61□□□□□ -1.03
USP8-201ENST00000307179 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.05
USP8-201ENST00000307179 ABCC9O60706 1549 aa8.5□□□□□ -1.05
USP8-201ENST00000307179 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
USP8-201ENST00000307179 RB1CC1Q8TDY2 1594 aa8.35□□□□□ -1.07
USP8-201ENST00000307179 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
USP8-201ENST00000307179 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
USP8-201ENST00000307179 TTBK1Q5TCY1 1321 aaPredicted RBP8.3□□□□□ -1.08
USP8-201ENST00000307179 LOC105371045A0A1W2PR82 267 aa8.29□□□□□ -1.08
USP8-201ENST00000307179 RSF1Q96T23 1441 aaPredicted RBP8.24□□□□□ -1.09
USP8-201ENST00000307179 CLSPNQ9HAW4 1339 aa8.23□□□□□ -1.09
USP8-201ENST00000307179 WRNQ14191 1432 aaPredicted RBP eCLIP8.22□□□□□ -1.09
USP8-201ENST00000307179 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
USP8-201ENST00000307179 EIF4G1Q04637 1599 aaKnown RBP8.17□□□□□ -1.1
USP8-201ENST00000307179 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
USP8-201ENST00000307179 GTF3C3Q9Y5Q9 886 aa8.15□□□□□ -1.11
USP8-201ENST00000307179 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
USP8-201ENST00000307179 BAZ1AQ9NRL2 1556 aaPredicted RBP8.13□□□□□ -1.11
USP8-201ENST00000307179 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
USP8-201ENST00000307179 EEA1Q15075 1411 aa8.1□□□□□ -1.11
USP8-201ENST00000307179 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
USP8-201ENST00000307179 NACADO15069 1562 aa8.08□□□□□ -1.12
USP8-201ENST00000307179 ZNF316A6NFI3 1004 aaPredicted RBP8.06□□□□□ -1.12
USP8-201ENST00000307179 DCAF8L2P0C7V8 631 aa8.06□□□□□ -1.12
USP8-201ENST00000307179 TNIKQ9UKE5 1360 aa8.03□□□□□ -1.12
USP8-201ENST00000307179 TOP2AP11388 1531 aaKnown RBP8□□□□□ -1.13
USP8-201ENST00000307179 CEP162Q5TB80 1403 aa8□□□□□ -1.13
USP8-201ENST00000307179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.99□□□□□ -1.13
USP8-201ENST00000307179 WIZO95785 1651 aa7.99□□□□□ -1.13
USP8-201ENST00000307179 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
USP8-201ENST00000307179 KIF21BO75037 1637 aa7.98□□□□□ -1.13
USP8-201ENST00000307179 GOLGA3Q08378 1498 aa7.96□□□□□ -1.14
USP8-201ENST00000307179 BAZ1BQ9UIG0 1483 aaKnown RBP7.93□□□□□ -1.14
USP8-201ENST00000307179 FAM9AQ8IZU1 332 aaPredicted RBP7.92□□□□□ -1.14
USP8-201ENST00000307179 SMARCA2P51531 1590 aa7.91□□□□□ -1.14
USP8-201ENST00000307179 CECR2Q9BXF3 1484 aa7.9□□□□□ -1.15
USP8-201ENST00000307179 ANP32EQ9BTT0 268 aa7.89□□□□□ -1.15
USP8-201ENST00000307179 CEP164Q9UPV0 1460 aa7.89□□□□□ -1.15
USP8-201ENST00000307179 SMARCA4P51532 1647 aa7.89□□□□□ -1.15
USP8-201ENST00000307179 MIER1Q8N108 512 aa7.85□□□□□ -1.15
USP8-201ENST00000307179 VPS8Q8N3P4 1428 aa7.85□□□□□ -1.15
USP8-201ENST00000307179 CCDC88BA6NC98 1476 aa7.85□□□□□ -1.15
USP8-201ENST00000307179 ABCC8Q09428 1581 aa7.85□□□□□ -1.15
USP8-201ENST00000307179 CUX2O14529 1486 aa7.83□□□□□ -1.16
USP8-201ENST00000307179 SUPT16HQ9Y5B9 1047 aaKnown RBP7.83□□□□□ -1.16
USP8-201ENST00000307179 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
USP8-201ENST00000307179 CSRNP3Q8WYN3 585 aa7.8□□□□□ -1.16
USP8-201ENST00000307179 YTHDC1Q96MU7 727 aaKnown RBP7.8□□□□□ -1.16
USP8-201ENST00000307179 ERICH3Q5RHP9 1530 aa7.8□□□□□ -1.16
USP8-201ENST00000307179 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
USP8-201ENST00000307179 CLIP1P30622 1438 aa7.79□□□□□ -1.16
USP8-201ENST00000307179 BCL11AQ9H165 835 aa7.79□□□□□ -1.16
USP8-201ENST00000307179 TSHZ2Q9NRE2 1034 aa7.78□□□□□ -1.16
USP8-201ENST00000307179 SOGA1O94964 1423 aa7.78□□□□□ -1.16
USP8-201ENST00000307179 SYNJ1O43426 1573 aa7.75□□□□□ -1.17
USP8-201ENST00000307179 DHX57Q6P158 1386 aaKnown RBP7.75□□□□□ -1.17
USP8-201ENST00000307179 RRBP1Q9P2E9 1410 aaKnown RBP7.74□□□□□ -1.17
USP8-201ENST00000307179 BIVM-ERCC5R4GMW8 1640 aa7.74□□□□□ -1.17
USP8-201ENST00000307179 UNC13AQ9UPW8 1703 aa7.74□□□□□ -1.17
USP8-201ENST00000307179 APLP2Q06481 763 aa7.72□□□□□ -1.17
USP8-201ENST00000307179 MAP3K1Q13233 1512 aa7.72□□□□□ -1.17
USP8-201ENST00000307179 UBTFP17480 764 aaKnown RBP7.71□□□□□ -1.18
USP8-201ENST00000307179 TOP2BQ02880 1626 aa7.71□□□□□ -1.18
USP8-201ENST00000307179 EHMT2Q96KQ7 1210 aa7.69□□□□□ -1.18
USP8-201ENST00000307179 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
USP8-201ENST00000307179 TIMELESSQ9UNS1 1208 aa7.67□□□□□ -1.18
USP8-201ENST00000307179 NEFLP07196 543 aa7.67□□□□□ -1.18
USP8-201ENST00000307179 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
USP8-201ENST00000307179 CCER2I3L3R5 266 aa7.66□□□□□ -1.18
USP8-201ENST00000307179 HNRNPUL2Q1KMD3 747 aaKnown RBP7.65□□□□□ -1.18
USP8-201ENST00000307179 ERICH6BQ5W0A0 696 aa7.65□□□□□ -1.18
USP8-201ENST00000307179 ARAP1Q96P48 1450 aa7.65□□□□□ -1.18
USP8-201ENST00000307179 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
USP8-201ENST00000307179 PRXQ9BXM0 1461 aa7.64□□□□□ -1.19
USP8-201ENST00000307179 CFAP43Q8NDM7 1665 aa7.63□□□□□ -1.19
USP8-201ENST00000307179 MAPKBP1O60336 1514 aa7.62□□□□□ -1.19
USP8-201ENST00000307179 ERICH6Q7L0X2 663 aa7.61□□□□□ -1.19
USP8-201ENST00000307179 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
USP8-201ENST00000307179 CCNB3Q8WWL7 1395 aa7.61□□□□□ -1.19
USP8-201ENST00000307179 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
USP8-201ENST00000307179 TIAM1Q13009 1591 aa7.59□□□□□ -1.19
USP8-201ENST00000307179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.57□□□□□ -1.2
USP8-201ENST00000307179 FKBP8Q14318 412 aa7.57□□□□□ -1.2
USP8-201ENST00000307179 SETD5Q9C0A6 1442 aa7.56□□□□□ -1.2
USP8-201ENST00000307179 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
USP8-201ENST00000307179 BICRAQ9NZM4 1560 aa7.53□□□□□ -1.2
USP8-201ENST00000307179 RAB3GAP2Q9H2M9 1393 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms