RNA–Protein interactions for RNA: ENST00000306317.6

LGI3-201, Transcript of leucine rich repeat LGI family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGI3, Length 3,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-201ENST00000306317 POLR3GLQ9BT43 218 aa25.98■■□□□ 1.75
LGI3-201ENST00000306317 CUX1P39880 1505 aa25.98■■□□□ 1.75
LGI3-201ENST00000306317 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
LGI3-201ENST00000306317 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
LGI3-201ENST00000306317 ARAP1Q96P48 1450 aa25.96■■□□□ 1.75
LGI3-201ENST00000306317 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
LGI3-201ENST00000306317 CLSPNQ9HAW4 1339 aa25.94■■□□□ 1.74
LGI3-201ENST00000306317 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
LGI3-201ENST00000306317 CFTRP13569 1480 aa25.85■■□□□ 1.73
LGI3-201ENST00000306317 NBR1Q14596 966 aa25.84■■□□□ 1.73
LGI3-201ENST00000306317 CCNB3Q8WWL7 1395 aa25.84■■□□□ 1.73
LGI3-201ENST00000306317 ARID3CA6NKF2 412 aa25.83■■□□□ 1.73
LGI3-201ENST00000306317 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
LGI3-201ENST00000306317 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
LGI3-201ENST00000306317 ARHGAP35Q9NRY4 1499 aa25.74■■□□□ 1.71
LGI3-201ENST00000306317 CUX2O14529 1486 aa25.74■■□□□ 1.71
LGI3-201ENST00000306317 B4GALNT3Q6L9W6 998 aa25.71■■□□□ 1.71
LGI3-201ENST00000306317 MSH5O43196 834 aa25.71■■□□□ 1.71
LGI3-201ENST00000306317 CHIC2Q9UKJ5 165 aa25.71■■□□□ 1.71
LGI3-201ENST00000306317 RRBP1Q9P2E9 1410 aaKnown RBP25.69■■□□□ 1.7
LGI3-201ENST00000306317 IGF1RP08069 1367 aa25.68■■□□□ 1.7
LGI3-201ENST00000306317 TONSLQ96HA7 1378 aa25.65■■□□□ 1.7
LGI3-201ENST00000306317 CADPSQ9ULU8 1353 aa25.62■■□□□ 1.69
LGI3-201ENST00000306317 CARMIL1Q5VZK9 1371 aa25.62■■□□□ 1.69
LGI3-201ENST00000306317 ZNF326Q5BKZ1 582 aaKnown RBP25.58■■□□□ 1.69
LGI3-201ENST00000306317 PPP1R15AO75807 674 aaPredicted RBP25.56■■□□□ 1.68
LGI3-201ENST00000306317 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
LGI3-201ENST00000306317 RRP7BPQ9NSQ0 103 aa25.55■■□□□ 1.68
LGI3-201ENST00000306317 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
LGI3-201ENST00000306317 NPM2Q86SE8 214 aaKnown RBP25.51■■□□□ 1.67
LGI3-201ENST00000306317 FOXD1Q16676 465 aa25.5■■□□□ 1.67
LGI3-201ENST00000306317 SETD5Q9C0A6 1442 aa25.5■■□□□ 1.67
LGI3-201ENST00000306317 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
LGI3-201ENST00000306317 PRKCSHP14314 528 aaPredicted RBP25.48■■□□□ 1.67
LGI3-201ENST00000306317 CCDC184Q52MB2 194 aa25.48■■□□□ 1.67
LGI3-201ENST00000306317 MRS2Q9HD23 443 aa25.48■■□□□ 1.67
LGI3-201ENST00000306317 TIAM1Q13009 1591 aa25.43■■□□□ 1.66
LGI3-201ENST00000306317 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
LGI3-201ENST00000306317 PHLDB1Q86UU1 1377 aa25.41■■□□□ 1.66
LGI3-201ENST00000306317 RTN4Q9NQC3 1192 aaKnown RBP25.41■■□□□ 1.66
LGI3-201ENST00000306317 DEKP35659 375 aaKnown RBP25.4■■□□□ 1.66
LGI3-201ENST00000306317 LRRC9Q6ZRR7 1453 aa25.39■■□□□ 1.66
LGI3-201ENST00000306317 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
LGI3-201ENST00000306317 CCER2I3L3R5 266 aa25.37■■□□□ 1.65
LGI3-201ENST00000306317 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
LGI3-201ENST00000306317 HSPA5P11021 654 aaKnown RBP25.34■■□□□ 1.65
LGI3-201ENST00000306317 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
LGI3-201ENST00000306317 MAP3K1Q13233 1512 aa25.33■■□□□ 1.65
LGI3-201ENST00000306317 FHOD3Q2V2M9 1422 aa25.32■■□□□ 1.64
LGI3-201ENST00000306317 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
LGI3-201ENST00000306317 MAPKBP1O60336 1514 aa25.28■■□□□ 1.64
LGI3-201ENST00000306317 RTL5Q5HYW3 569 aaPredicted RBP25.27■■□□□ 1.64
LGI3-201ENST00000306317 CCDC136Q96JN2 1154 aa25.25■■□□□ 1.63
LGI3-201ENST00000306317 PAK3O75914 559 aaPredicted RBP25.25■■□□□ 1.63
LGI3-201ENST00000306317 PPP4R2Q9NY27 417 aa25.25■■□□□ 1.63
LGI3-201ENST00000306317 PCF11O94913 1555 aaKnown RBP25.25■■□□□ 1.63
LGI3-201ENST00000306317 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
LGI3-201ENST00000306317 MTUS2Q5JR59 1369 aa25.21■■□□□ 1.63
LGI3-201ENST00000306317 NESP48681 1621 aa25.2■■□□□ 1.63
LGI3-201ENST00000306317 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
LGI3-201ENST00000306317 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
LGI3-201ENST00000306317 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
LGI3-201ENST00000306317 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
LGI3-201ENST00000306317 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
LGI3-201ENST00000306317 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
LGI3-201ENST00000306317 NOP58Q9Y2X3 529 aaKnown RBP25.16■■□□□ 1.62
LGI3-201ENST00000306317 ANP32AP39687 249 aaKnown RBP25.14■■□□□ 1.61
LGI3-201ENST00000306317 CFAP43Q8NDM7 1665 aa25.13■■□□□ 1.61
LGI3-201ENST00000306317 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
LGI3-201ENST00000306317 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
LGI3-201ENST00000306317 C11orf95C9JLR9 678 aaPredicted RBP25.1■■□□□ 1.61
LGI3-201ENST00000306317 FANCIQ9NVI1 1328 aa25.08■■□□□ 1.61
LGI3-201ENST00000306317 ZBTB47Q9UFB7 747 aaPredicted RBP25.08■■□□□ 1.61
LGI3-201ENST00000306317 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
LGI3-201ENST00000306317 L3MBTL2Q969R5 705 aa25.08■■□□□ 1.61
LGI3-201ENST00000306317 EFCAB5A4FU69 1503 aa25.07■■□□□ 1.6
LGI3-201ENST00000306317 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
LGI3-201ENST00000306317 TIMELESSQ9UNS1 1208 aa25.03■■□□□ 1.6
LGI3-201ENST00000306317 ANO8Q9HCE9 1232 aaPredicted RBP25.02■■□□□ 1.6
LGI3-201ENST00000306317 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.59
LGI3-201ENST00000306317 ZNF777Q9ULD5 760 aaPredicted RBP25.01■■□□□ 1.59
LGI3-201ENST00000306317 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
LGI3-201ENST00000306317 PRKRIP1Q9H875 184 aaPredicted RBP25.01■■□□□ 1.59
LGI3-201ENST00000306317 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.01■■□□□ 1.59
LGI3-201ENST00000306317 CUL7Q14999 1698 aa25■■□□□ 1.59
LGI3-201ENST00000306317 KDM2AQ9Y2K7 1162 aa25■■□□□ 1.59
LGI3-201ENST00000306317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.97■■□□□ 1.59
LGI3-201ENST00000306317 TMC1Q8TDI8 760 aa24.97■■□□□ 1.59
LGI3-201ENST00000306317 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
LGI3-201ENST00000306317 CTTNBP2Q8WZ74 1663 aa24.95■■□□□ 1.58
LGI3-201ENST00000306317 SLC4A1APQ9BWU0 796 aaKnown RBP24.94■■□□□ 1.58
LGI3-201ENST00000306317 SKAP1Q86WV1 359 aa24.94■■□□□ 1.58
LGI3-201ENST00000306317 AKNAQ7Z591 1439 aa24.93■■□□□ 1.58
LGI3-201ENST00000306317 CCDC18Q5T9S5 1454 aa24.92■■□□□ 1.58
LGI3-201ENST00000306317 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
LGI3-201ENST00000306317 IL27Q8NEV9 243 aa24.91■■□□□ 1.58
LGI3-201ENST00000306317 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
LGI3-201ENST00000306317 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
LGI3-201ENST00000306317 MPHOSPH9Q99550 1183 aa24.89■■□□□ 1.57
LGI3-201ENST00000306317 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms