RNA–Protein interactions for RNA: ENST00000304858.6

HSPA4-201, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-201ENST00000304858 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
HSPA4-201ENST00000304858 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
HSPA4-201ENST00000304858 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
HSPA4-201ENST00000304858 CUX2O14529 1486 aa16.69■□□□□ 0.26
HSPA4-201ENST00000304858 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
HSPA4-201ENST00000304858 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
HSPA4-201ENST00000304858 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
HSPA4-201ENST00000304858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.262e-7■■□□□ 11.7
HSPA4-201ENST00000304858 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
HSPA4-201ENST00000304858 FAM9BQ8IZU0 186 aa16.65■□□□□ 0.26
HSPA4-201ENST00000304858 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
HSPA4-201ENST00000304858 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
HSPA4-201ENST00000304858 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
HSPA4-201ENST00000304858 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
HSPA4-201ENST00000304858 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
HSPA4-201ENST00000304858 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
HSPA4-201ENST00000304858 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
HSPA4-201ENST00000304858 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
HSPA4-201ENST00000304858 PLEKHD1A6NEE1 506 aa16.57■□□□□ 0.24
HSPA4-201ENST00000304858 KDM2AQ9Y2K7 1162 aa16.53■□□□□ 0.24
HSPA4-201ENST00000304858 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
HSPA4-201ENST00000304858 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
HSPA4-201ENST00000304858 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
HSPA4-201ENST00000304858 MRS2Q9HD23 443 aa16.49■□□□□ 0.23
HSPA4-201ENST00000304858 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
HSPA4-201ENST00000304858 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
HSPA4-201ENST00000304858 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
HSPA4-201ENST00000304858 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.232e-9■■■□□ 14.6
HSPA4-201ENST00000304858 BCL11AQ9H165 835 aa16.47■□□□□ 0.23
HSPA4-201ENST00000304858 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
HSPA4-201ENST00000304858 SETD5Q9C0A6 1442 aa16.43■□□□□ 0.22
HSPA4-201ENST00000304858 A0A0G2JS52 829 aa16.42■□□□□ 0.22
HSPA4-201ENST00000304858 FOXD1Q16676 465 aa16.42■□□□□ 0.22
HSPA4-201ENST00000304858 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
HSPA4-201ENST00000304858 DHX57Q6P158 1386 aaKnown RBP16.41■□□□□ 0.22
HSPA4-201ENST00000304858 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
HSPA4-201ENST00000304858 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
HSPA4-201ENST00000304858 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
HSPA4-201ENST00000304858 CFDP1Q9UEE9 299 aaPredicted RBP16.38■□□□□ 0.21
HSPA4-201ENST00000304858 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
HSPA4-201ENST00000304858 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
HSPA4-201ENST00000304858 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
HSPA4-201ENST00000304858 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
HSPA4-201ENST00000304858 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
HSPA4-201ENST00000304858 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
HSPA4-201ENST00000304858 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
HSPA4-201ENST00000304858 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
HSPA4-201ENST00000304858 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
HSPA4-201ENST00000304858 KIF21BO75037 1637 aa16.3■□□□□ 0.2
HSPA4-201ENST00000304858 IGF1RP08069 1367 aa16.3■□□□□ 0.2
HSPA4-201ENST00000304858 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
HSPA4-201ENST00000304858 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
HSPA4-201ENST00000304858 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
HSPA4-201ENST00000304858 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
HSPA4-201ENST00000304858 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
HSPA4-201ENST00000304858 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
HSPA4-201ENST00000304858 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
HSPA4-201ENST00000304858 MLECQ14165 292 aa16.21■□□□□ 0.19
HSPA4-201ENST00000304858 FANCD2Q9BXW9 1451 aa16.21■□□□□ 0.19
HSPA4-201ENST00000304858 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.18
HSPA4-201ENST00000304858 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
HSPA4-201ENST00000304858 MPHOSPH9Q99550 1183 aa16.19■□□□□ 0.18
HSPA4-201ENST00000304858 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
HSPA4-201ENST00000304858 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
HSPA4-201ENST00000304858 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
HSPA4-201ENST00000304858 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
HSPA4-201ENST00000304858 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
HSPA4-201ENST00000304858 LMOD2Q6P5Q4 547 aa16.16■□□□□ 0.18
HSPA4-201ENST00000304858 PKD2Q13563 968 aa16.14■□□□□ 0.17
HSPA4-201ENST00000304858 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
HSPA4-201ENST00000304858 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
HSPA4-201ENST00000304858 B4GALNT3Q6L9W6 998 aa16.13■□□□□ 0.17
HSPA4-201ENST00000304858 NBR1Q14596 966 aa16.11■□□□□ 0.17
HSPA4-201ENST00000304858 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
HSPA4-201ENST00000304858 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
HSPA4-201ENST00000304858 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.177e-6■■■■■ 27.3
HSPA4-201ENST00000304858 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
HSPA4-201ENST00000304858 CUX1P39880 1505 aa16.08■□□□□ 0.16
HSPA4-201ENST00000304858 POGKQ9P215 609 aa16.07■□□□□ 0.16
HSPA4-201ENST00000304858 CFTRP13569 1480 aa16.07■□□□□ 0.16
HSPA4-201ENST00000304858 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
HSPA4-201ENST00000304858 TSHZ2Q9NRE2 1034 aa16.05■□□□□ 0.16
HSPA4-201ENST00000304858 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
HSPA4-201ENST00000304858 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
HSPA4-201ENST00000304858 NESP48681 1621 aa16.03■□□□□ 0.16
HSPA4-201ENST00000304858 GGT6Q6P531 493 aa16.02■□□□□ 0.15
HSPA4-201ENST00000304858 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
HSPA4-201ENST00000304858 ZNF644Q9H582 1327 aaPredicted RBP16.02■□□□□ 0.15
HSPA4-201ENST00000304858 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
HSPA4-201ENST00000304858 ERICH3Q5RHP9 1530 aa16.01■□□□□ 0.15
HSPA4-201ENST00000304858 ARXQ96QS3 562 aa16.01■□□□□ 0.15
HSPA4-201ENST00000304858 CCDC18Q5T9S5 1454 aa16.01■□□□□ 0.15
HSPA4-201ENST00000304858 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
HSPA4-201ENST00000304858 HNRNPMP52272 730 aaKnown RBP eCLIP16■□□□□ 0.151e-11■■□□□ 12.1
HSPA4-201ENST00000304858 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
HSPA4-201ENST00000304858 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
HSPA4-201ENST00000304858 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
HSPA4-201ENST00000304858 NUP155O75694 1391 aa16■□□□□ 0.15
HSPA4-201ENST00000304858 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
HSPA4-201ENST00000304858 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms