RNA–Protein interactions for RNA: ENST00000304858.6

HSPA4-201, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA4, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-201ENST00000304858 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
HSPA4-201ENST00000304858 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
HSPA4-201ENST00000304858 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
HSPA4-201ENST00000304858 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
HSPA4-201ENST00000304858 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
HSPA4-201ENST00000304858 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
HSPA4-201ENST00000304858 PCGF6Q9BYE7 350 aa19.41■□□□□ 0.7
HSPA4-201ENST00000304858 APLP2Q06481 763 aa19.09■□□□□ 0.65
HSPA4-201ENST00000304858 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
HSPA4-201ENST00000304858 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
HSPA4-201ENST00000304858 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
HSPA4-201ENST00000304858 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
HSPA4-201ENST00000304858 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
HSPA4-201ENST00000304858 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
HSPA4-201ENST00000304858 HRCP23327 699 aa18.69■□□□□ 0.58
HSPA4-201ENST00000304858 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
HSPA4-201ENST00000304858 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
HSPA4-201ENST00000304858 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
HSPA4-201ENST00000304858 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
HSPA4-201ENST00000304858 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
HSPA4-201ENST00000304858 ABCC9O60706 1549 aa18.49■□□□□ 0.55
HSPA4-201ENST00000304858 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
HSPA4-201ENST00000304858 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
HSPA4-201ENST00000304858 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
HSPA4-201ENST00000304858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
HSPA4-201ENST00000304858 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
HSPA4-201ENST00000304858 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
HSPA4-201ENST00000304858 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
HSPA4-201ENST00000304858 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
HSPA4-201ENST00000304858 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
HSPA4-201ENST00000304858 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
HSPA4-201ENST00000304858 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
HSPA4-201ENST00000304858 ITGAEP38570 1179 aa17.97■□□□□ 0.47
HSPA4-201ENST00000304858 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
HSPA4-201ENST00000304858 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
HSPA4-201ENST00000304858 DIEXFQ68CQ4 756 aaKnown RBP17.77■□□□□ 0.43
HSPA4-201ENST00000304858 FBLN2P98095 1184 aa17.75■□□□□ 0.43
HSPA4-201ENST00000304858 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
HSPA4-201ENST00000304858 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
HSPA4-201ENST00000304858 POLR3GLQ9BT43 218 aa17.53■□□□□ 0.4
HSPA4-201ENST00000304858 FAM50AQ14320 339 aaKnown RBP17.5■□□□□ 0.39
HSPA4-201ENST00000304858 P3H3Q8IVL6 736 aa17.46■□□□□ 0.39
HSPA4-201ENST00000304858 GTF3C3Q9Y5Q9 886 aa17.46■□□□□ 0.39
HSPA4-201ENST00000304858 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
HSPA4-201ENST00000304858 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
HSPA4-201ENST00000304858 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
HSPA4-201ENST00000304858 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
HSPA4-201ENST00000304858 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
HSPA4-201ENST00000304858 NACADO15069 1562 aa17.36■□□□□ 0.37
HSPA4-201ENST00000304858 NEFLP07196 543 aa17.35■□□□□ 0.37
HSPA4-201ENST00000304858 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
HSPA4-201ENST00000304858 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
HSPA4-201ENST00000304858 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
HSPA4-201ENST00000304858 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
HSPA4-201ENST00000304858 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
HSPA4-201ENST00000304858 ARID3CA6NKF2 412 aa17.26■□□□□ 0.35
HSPA4-201ENST00000304858 SOGA1O94964 1423 aa17.22■□□□□ 0.35
HSPA4-201ENST00000304858 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
HSPA4-201ENST00000304858 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
HSPA4-201ENST00000304858 CLIP1P30622 1438 aa17.2■□□□□ 0.34
HSPA4-201ENST00000304858 BCANQ96GW7 911 aa17.2■□□□□ 0.34
HSPA4-201ENST00000304858 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
HSPA4-201ENST00000304858 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
HSPA4-201ENST00000304858 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
HSPA4-201ENST00000304858 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
HSPA4-201ENST00000304858 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
HSPA4-201ENST00000304858 WIZO95785 1651 aa17.13■□□□□ 0.33
HSPA4-201ENST00000304858 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
HSPA4-201ENST00000304858 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
HSPA4-201ENST00000304858 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
HSPA4-201ENST00000304858 MIER1Q8N108 512 aa17.1■□□□□ 0.33
HSPA4-201ENST00000304858 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
HSPA4-201ENST00000304858 MYT1Q01538 1121 aa17.06■□□□□ 0.32
HSPA4-201ENST00000304858 EEA1Q15075 1411 aa17.05■□□□□ 0.32
HSPA4-201ENST00000304858 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
HSPA4-201ENST00000304858 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
HSPA4-201ENST00000304858 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
HSPA4-201ENST00000304858 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
HSPA4-201ENST00000304858 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
HSPA4-201ENST00000304858 ANP32CO43423 234 aa16.97■□□□□ 0.31
HSPA4-201ENST00000304858 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
HSPA4-201ENST00000304858 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
HSPA4-201ENST00000304858 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
HSPA4-201ENST00000304858 CHIC2Q9UKJ5 165 aa16.93■□□□□ 0.3
HSPA4-201ENST00000304858 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
HSPA4-201ENST00000304858 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
HSPA4-201ENST00000304858 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
HSPA4-201ENST00000304858 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
HSPA4-201ENST00000304858 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.29
HSPA4-201ENST00000304858 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
HSPA4-201ENST00000304858 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
HSPA4-201ENST00000304858 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
HSPA4-201ENST00000304858 NEFMP07197 916 aa16.78■□□□□ 0.28
HSPA4-201ENST00000304858 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
HSPA4-201ENST00000304858 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
HSPA4-201ENST00000304858 FKBP8Q14318 412 aa16.77■□□□□ 0.28
HSPA4-201ENST00000304858 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
HSPA4-201ENST00000304858 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
HSPA4-201ENST00000304858 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
HSPA4-201ENST00000304858 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms