RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 SHROOM2Q13796 1616 aa47.75■■■■■ 5.23
COPS6-201ENST00000303904 JPH4Q96JJ6 628 aa47.73■■■■■ 5.23
COPS6-201ENST00000303904 CYB5RLQ6IPT4 315 aa47.73■■■■■ 5.23
COPS6-201ENST00000303904 CSRNP3Q8WYN3 585 aa47.73■■■■■ 5.23
COPS6-201ENST00000303904 ARAP1Q96P48 1450 aa47.7■■■■■ 5.23
COPS6-201ENST00000303904 PRXQ9BXM0 1461 aa47.67■■■■■ 5.22
COPS6-201ENST00000303904 PRG4Q92954 1404 aaPredicted RBP47.61■■■■■ 5.21
COPS6-201ENST00000303904 FAM9AQ8IZU1 332 aaPredicted RBP47.53■■■■■ 5.2
COPS6-201ENST00000303904 IQGAP2Q13576 1575 aa47.52■■■■■ 5.2
COPS6-201ENST00000303904 ERCC6L2Q5T890 1561 aa47.5■■■■■ 5.19
COPS6-201ENST00000303904 CARMIL2Q6F5E8 1435 aa47.38■■■■■ 5.17
COPS6-201ENST00000303904 CTTNBP2Q8WZ74 1663 aa47.35■■■■■ 5.17
COPS6-201ENST00000303904 UGGT2Q9NYU1 1516 aa47.25■■■■■ 5.15
COPS6-201ENST00000303904 KIF21BO75037 1637 aa47.24■■■■■ 5.15
COPS6-201ENST00000303904 TNIKQ9UKE5 1360 aa47.14■■■■■ 5.14
COPS6-201ENST00000303904 GOLGA3Q08378 1498 aa47.12■■■■■ 5.13
COPS6-201ENST00000303904 DISP1Q96F81 1524 aa47.11■■■■■ 5.13
COPS6-201ENST00000303904 PTPRGP23470 1445 aa47.1■■■■■ 5.13
COPS6-201ENST00000303904 KIAA0556O60303 1618 aa47.03■■■■■ 5.12
COPS6-201ENST00000303904 TTBK1Q5TCY1 1321 aaPredicted RBP46.98■■■■■ 5.11
COPS6-201ENST00000303904 UBTFP17480 764 aaKnown RBP46.95■■■■■ 5.11
COPS6-201ENST00000303904 NPM1P06748 294 aaKnown RBP eCLIP46.91■■■■■ 5.1
COPS6-201ENST00000303904 EHMT2Q96KQ7 1210 aa46.86■■■■■ 5.09
COPS6-201ENST00000303904 ADCY10Q96PN6 1610 aa46.8■■■■■ 5.08
COPS6-201ENST00000303904 TRHP20396 242 aaPredicted RBP46.79■■■■■ 5.08
COPS6-201ENST00000303904 UACAQ9BZF9 1416 aa46.78■■■■■ 5.08
COPS6-201ENST00000303904 SAMD9Q5K651 1589 aa46.73■■■■■ 5.07
COPS6-201ENST00000303904 RANGAP1P46060 587 aaPredicted RBP46.73■■■■■ 5.07
COPS6-201ENST00000303904 UHRF1BP1LA0JNW5 1464 aa46.71■■■■■ 5.07
COPS6-201ENST00000303904 P3H3Q8IVL6 736 aa46.69■■■■■ 5.06
COPS6-201ENST00000303904 ABCC2Q92887 1545 aa46.66■■■■■ 5.06
COPS6-201ENST00000303904 EFCAB5A4FU69 1503 aa46.66■■■■■ 5.06
COPS6-201ENST00000303904 MAPKBP1O60336 1514 aa46.57■■■■■ 5.05
COPS6-201ENST00000303904 PLB1Q6P1J6 1458 aa46.54■■■■■ 5.04
COPS6-201ENST00000303904 ABCA8O94911 1581 aa46.49■■■■■ 5.03
COPS6-201ENST00000303904 FHOD3Q2V2M9 1422 aa46.47■■■■■ 5.03
COPS6-201ENST00000303904 KDM5BQ9UGL1 1544 aa46.46■■■■■ 5.03
COPS6-201ENST00000303904 ABCC10Q5T3U5 1492 aa46.34■■■■■ 5.01
COPS6-201ENST00000303904 ZCCHC11Q5TAX3 1644 aaKnown RBP46.33■■■■■ 5.01
COPS6-201ENST00000303904 ARHGAP35Q9NRY4 1499 aa46.33■■■■■ 5.01
COPS6-201ENST00000303904 ASXL2Q76L83 1435 aa46.31■■■■■ 5
COPS6-201ENST00000303904 RAPGEF6Q8TEU7 1601 aa46.31■■■■■ 5
COPS6-201ENST00000303904 FAM69CQ0P6D2 419 aa46.28■■■■■ 5
COPS6-201ENST00000303904 FMN1Q68DA7 1419 aa46.26■■■■■ 5
COPS6-201ENST00000303904 DIP2BQ9P265 1576 aa46.22■■■■■ 4.99
COPS6-201ENST00000303904 KIF13AQ9H1H9 1805 aa46.19■■■■■ 4.99
COPS6-201ENST00000303904 CLIP1P30622 1438 aa46.17■■■■■ 4.98
COPS6-201ENST00000303904 WDR7Q9Y4E6 1490 aa46.13■■■■■ 4.97
COPS6-201ENST00000303904 ATP10BO94823 1461 aa46.12■■■■■ 4.97
COPS6-201ENST00000303904 ARID3CA6NKF2 412 aa46.11■■■■■ 4.97
COPS6-201ENST00000303904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP46.11■■■■■ 4.97
COPS6-201ENST00000303904 HNRNPUL2Q1KMD3 747 aaKnown RBP46.11■■■■■ 4.97
COPS6-201ENST00000303904 NUP153P49790 1475 aaKnown RBP46.1■■■■■ 4.97
COPS6-201ENST00000303904 GLI2P10070 1586 aa46.03■■■■■ 4.96
COPS6-201ENST00000303904 EPRSP07814 1512 aaKnown RBP46.03■■■■■ 4.96
COPS6-201ENST00000303904 LOC105371045A0A1W2PR82 267 aa46■■■■■ 4.95
COPS6-201ENST00000303904 ATP1B4Q9UN42 357 aaPredicted RBP45.99■■■■■ 4.95
COPS6-201ENST00000303904 HECW1Q76N89 1606 aa45.98■■■■■ 4.95
COPS6-201ENST00000303904 CEP162Q5TB80 1403 aa45.95■■■■■ 4.95
COPS6-201ENST00000303904 KCNH8Q96L42 1107 aa45.92■■■■■ 4.94
COPS6-201ENST00000303904 PLEKHD1A6NEE1 506 aa45.88■■■■■ 4.94
COPS6-201ENST00000303904 CASKIN1Q8WXD9 1431 aa45.83■■■■■ 4.93
COPS6-201ENST00000303904 CDK11AQ9UQ88 783 aaPredicted RBP45.81■■■■■ 4.92
COPS6-201ENST00000303904 TSPOAP1O95153 1857 aa45.8■■■■■ 4.92
COPS6-201ENST00000303904 MAP3K4Q9Y6R4 1608 aa45.78■■■■■ 4.92
COPS6-201ENST00000303904 CDK13Q14004 1512 aaKnown RBP45.77■■■■■ 4.92
COPS6-201ENST00000303904 FYCO1Q9BQS8 1478 aa45.76■■■■■ 4.92
COPS6-201ENST00000303904 PCF11O94913 1555 aaKnown RBP45.75■■■■■ 4.92
COPS6-201ENST00000303904 CFAP43Q8NDM7 1665 aa45.73■■■■■ 4.91
COPS6-201ENST00000303904 TEX14Q8IWB6 1497 aa45.72■■■■■ 4.91
COPS6-201ENST00000303904 CCDC18Q5T9S5 1454 aa45.72■■■■■ 4.91
COPS6-201ENST00000303904 CD109Q6YHK3 1445 aa45.71■■■■■ 4.91
COPS6-201ENST00000303904 ABCA9Q8IUA7 1624 aa45.62■■■■■ 4.89
COPS6-201ENST00000303904 MAGI3Q5TCQ9 1506 aa45.6■■■■■ 4.89
COPS6-201ENST00000303904 PPRC1Q5VV67 1664 aaKnown RBP45.59■■■■■ 4.89
COPS6-201ENST00000303904 LRRIQ1Q96JM4 1722 aa45.53■■■■■ 4.88
COPS6-201ENST00000303904 KDM6BO15054 1643 aa45.52■■■■■ 4.88
COPS6-201ENST00000303904 TROQ12816 1431 aaPredicted RBP45.5■■■■■ 4.87
COPS6-201ENST00000303904 VPS8Q8N3P4 1428 aa45.42■■■■■ 4.86
COPS6-201ENST00000303904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP45.42■■■■■ 4.861e-9■■■□□ 15.8
COPS6-201ENST00000303904 KIF14Q15058 1648 aa45.41■■■■■ 4.86
COPS6-201ENST00000303904 PHLDB1Q86UU1 1377 aa45.38■■■■■ 4.86
COPS6-201ENST00000303904 TTC37Q6PGP7 1564 aa45.33■■■■■ 4.85
COPS6-201ENST00000303904 NEO1Q92859 1461 aa45.31■■■■■ 4.84
COPS6-201ENST00000303904 MTUS2Q5JR59 1369 aa45.27■■■■■ 4.84
COPS6-201ENST00000303904 CFAP74Q9C0B2 1584 aa45.24■■■■■ 4.83
COPS6-201ENST00000303904 PLCH2O75038 1416 aa45.22■■■■■ 4.83
COPS6-201ENST00000303904 FANCAO15360 1455 aa45.21■■■■■ 4.83
COPS6-201ENST00000303904 ARAP3Q8WWN8 1544 aa45.19■■■■■ 4.82
COPS6-201ENST00000303904 MYO5CQ9NQX4 1742 aa45.18■■■■■ 4.82
COPS6-201ENST00000303904 COL17A1Q9UMD9 1497 aaPredicted RBP45.18■■■■■ 4.82
COPS6-201ENST00000303904 EFCAB2Q5VUJ9 269 aa45.13■■■■■ 4.82
COPS6-201ENST00000303904 EHBP1L1Q8N3D4 1523 aa45.12■■■■■ 4.81
COPS6-201ENST00000303904 AKNAQ7Z591 1439 aa45.1■■■■■ 4.81
COPS6-201ENST00000303904 APLP2Q06481 763 aa45.09■■■■■ 4.81
COPS6-201ENST00000303904 TIAM1Q13009 1591 aa45.08■■■■■ 4.81
COPS6-201ENST00000303904 ARHGAP5Q13017 1502 aa45.06■■■■■ 4.8
COPS6-201ENST00000303904 MAP3K1Q13233 1512 aa45.04■■■■■ 4.8
COPS6-201ENST00000303904 DENND4BO75064 1496 aaPredicted RBP44.99■■■■■ 4.79
COPS6-201ENST00000303904 PREX2Q70Z35 1606 aa44.98■■■■■ 4.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms