RNA–Protein interactions for RNA: ENST00000301919.8

MSANTD4-201, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSANTD4, Length 4,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-201ENST00000301919 KDM2AQ9Y2K7 1162 aa17.54■□□□□ 0.4
MSANTD4-201ENST00000301919 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
MSANTD4-201ENST00000301919 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
MSANTD4-201ENST00000301919 FOXD1Q16676 465 aa17.49■□□□□ 0.39
MSANTD4-201ENST00000301919 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
MSANTD4-201ENST00000301919 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
MSANTD4-201ENST00000301919 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
MSANTD4-201ENST00000301919 FAM9BQ8IZU0 186 aa17.44■□□□□ 0.38
MSANTD4-201ENST00000301919 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
MSANTD4-201ENST00000301919 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
MSANTD4-201ENST00000301919 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
MSANTD4-201ENST00000301919 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
MSANTD4-201ENST00000301919 HNRNPUQ00839 825 aaKnown RBP eCLIP17.4■□□□□ 0.38
MSANTD4-201ENST00000301919 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
MSANTD4-201ENST00000301919 RGL3Q3MIN7 710 aa17.39■□□□□ 0.37
MSANTD4-201ENST00000301919 NESP48681 1621 aa17.39■□□□□ 0.37
MSANTD4-201ENST00000301919 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
MSANTD4-201ENST00000301919 FKBP8Q14318 412 aa17.38■□□□□ 0.37
MSANTD4-201ENST00000301919 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
MSANTD4-201ENST00000301919 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
MSANTD4-201ENST00000301919 IGF1RP08069 1367 aa17.37■□□□□ 0.37
MSANTD4-201ENST00000301919 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
MSANTD4-201ENST00000301919 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
MSANTD4-201ENST00000301919 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
MSANTD4-201ENST00000301919 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
MSANTD4-201ENST00000301919 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
MSANTD4-201ENST00000301919 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.36
MSANTD4-201ENST00000301919 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
MSANTD4-201ENST00000301919 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
MSANTD4-201ENST00000301919 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
MSANTD4-201ENST00000301919 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
MSANTD4-201ENST00000301919 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
MSANTD4-201ENST00000301919 ARAP1Q96P48 1450 aa17.22■□□□□ 0.35
MSANTD4-201ENST00000301919 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
MSANTD4-201ENST00000301919 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
MSANTD4-201ENST00000301919 KIF21BO75037 1637 aa17.22■□□□□ 0.35
MSANTD4-201ENST00000301919 DHX57Q6P158 1386 aaKnown RBP17.2■□□□□ 0.34
MSANTD4-201ENST00000301919 CUX1P39880 1505 aa17.19■□□□□ 0.34
MSANTD4-201ENST00000301919 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
MSANTD4-201ENST00000301919 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
MSANTD4-201ENST00000301919 CFTRP13569 1480 aa17.17■□□□□ 0.34
MSANTD4-201ENST00000301919 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
MSANTD4-201ENST00000301919 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
MSANTD4-201ENST00000301919 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
MSANTD4-201ENST00000301919 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.33
MSANTD4-201ENST00000301919 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
MSANTD4-201ENST00000301919 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
MSANTD4-201ENST00000301919 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
MSANTD4-201ENST00000301919 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.33
MSANTD4-201ENST00000301919 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
MSANTD4-201ENST00000301919 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.33
MSANTD4-201ENST00000301919 PKD2Q13563 968 aa17.08■□□□□ 0.32
MSANTD4-201ENST00000301919 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
MSANTD4-201ENST00000301919 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
MSANTD4-201ENST00000301919 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
MSANTD4-201ENST00000301919 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
MSANTD4-201ENST00000301919 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
MSANTD4-201ENST00000301919 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
MSANTD4-201ENST00000301919 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
MSANTD4-201ENST00000301919 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
MSANTD4-201ENST00000301919 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
MSANTD4-201ENST00000301919 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
MSANTD4-201ENST00000301919 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
MSANTD4-201ENST00000301919 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
MSANTD4-201ENST00000301919 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
MSANTD4-201ENST00000301919 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
MSANTD4-201ENST00000301919 NUP155O75694 1391 aa16.93■□□□□ 0.3
MSANTD4-201ENST00000301919 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
MSANTD4-201ENST00000301919 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
MSANTD4-201ENST00000301919 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
MSANTD4-201ENST00000301919 MYT1Q01538 1121 aa16.92■□□□□ 0.3
MSANTD4-201ENST00000301919 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
MSANTD4-201ENST00000301919 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
MSANTD4-201ENST00000301919 GGT6Q6P531 493 aa16.88■□□□□ 0.29
MSANTD4-201ENST00000301919 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
MSANTD4-201ENST00000301919 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 DAXXQ9UER7 740 aaPredicted RBP16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 FGD6Q6ZV73 1430 aa16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 MLECQ14165 292 aa16.86■□□□□ 0.29
MSANTD4-201ENST00000301919 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
MSANTD4-201ENST00000301919 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
MSANTD4-201ENST00000301919 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
MSANTD4-201ENST00000301919 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
MSANTD4-201ENST00000301919 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
MSANTD4-201ENST00000301919 CCDC136Q96JN2 1154 aa16.83■□□□□ 0.28
MSANTD4-201ENST00000301919 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
MSANTD4-201ENST00000301919 B4GALNT3Q6L9W6 998 aa16.8■□□□□ 0.28
MSANTD4-201ENST00000301919 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
MSANTD4-201ENST00000301919 NCOA2Q15596 1464 aa16.79■□□□□ 0.28
MSANTD4-201ENST00000301919 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
MSANTD4-201ENST00000301919 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.28
MSANTD4-201ENST00000301919 KIF3BO15066 747 aa16.77■□□□□ 0.28
MSANTD4-201ENST00000301919 PTPRGP23470 1445 aa16.77■□□□□ 0.27
MSANTD4-201ENST00000301919 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
MSANTD4-201ENST00000301919 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
MSANTD4-201ENST00000301919 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
MSANTD4-201ENST00000301919 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
MSANTD4-201ENST00000301919 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms