RNA–Protein interactions for RNA: ENST00000300175.8

SCG5-201, Transcript of secretogranin V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SCG5, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-201ENST00000300175 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
SCG5-201ENST00000300175 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
SCG5-201ENST00000300175 CHMP7Q8WUX9 453 aaPredicted RBP12.37□□□□□ -0.43
SCG5-201ENST00000300175 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
SCG5-201ENST00000300175 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
SCG5-201ENST00000300175 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
SCG5-201ENST00000300175 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
SCG5-201ENST00000300175 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
SCG5-201ENST00000300175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCG5-201ENST00000300175 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
SCG5-201ENST00000300175 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
SCG5-201ENST00000300175 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
SCG5-201ENST00000300175 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
SCG5-201ENST00000300175 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
SCG5-201ENST00000300175 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
SCG5-201ENST00000300175 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
SCG5-201ENST00000300175 ERICH3Q5RHP9 1530 aa12.2□□□□□ -0.46
SCG5-201ENST00000300175 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
SCG5-201ENST00000300175 ERCC6L2Q5T890 1561 aa12.19□□□□□ -0.46
SCG5-201ENST00000300175 NUP160Q12769 1436 aa12.19□□□□□ -0.46
SCG5-201ENST00000300175 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
SCG5-201ENST00000300175 RNF39Q9H2S5 420 aa12.15□□□□□ -0.46
SCG5-201ENST00000300175 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
SCG5-201ENST00000300175 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
SCG5-201ENST00000300175 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
SCG5-201ENST00000300175 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
SCG5-201ENST00000300175 CUL7Q14999 1698 aa12.06□□□□□ -0.48
SCG5-201ENST00000300175 ZBTB22O15209 634 aa12.06□□□□□ -0.48
SCG5-201ENST00000300175 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
SCG5-201ENST00000300175 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
SCG5-201ENST00000300175 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
SCG5-201ENST00000300175 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
SCG5-201ENST00000300175 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
SCG5-201ENST00000300175 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
SCG5-201ENST00000300175 IGF1RP08069 1367 aa12□□□□□ -0.49
SCG5-201ENST00000300175 KIAA0586Q9BVV6 1533 aa11.99□□□□□ -0.49
SCG5-201ENST00000300175 ADCY10Q96PN6 1610 aa11.98□□□□□ -0.49
SCG5-201ENST00000300175 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
SCG5-201ENST00000300175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
SCG5-201ENST00000300175 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCG5-201ENST00000300175 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
SCG5-201ENST00000300175 CARMIL1Q5VZK9 1371 aa11.93□□□□□ -0.5
SCG5-201ENST00000300175 DIP2BQ9P265 1576 aa11.92□□□□□ -0.5
SCG5-201ENST00000300175 ABCC10Q5T3U5 1492 aa11.92□□□□□ -0.5
SCG5-201ENST00000300175 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
SCG5-201ENST00000300175 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
SCG5-201ENST00000300175 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
SCG5-201ENST00000300175 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
SCG5-201ENST00000300175 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
SCG5-201ENST00000300175 PTPRGP23470 1445 aa11.88□□□□□ -0.51
SCG5-201ENST00000300175 CARMIL2Q6F5E8 1435 aa11.88□□□□□ -0.51
SCG5-201ENST00000300175 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
SCG5-201ENST00000300175 TTBK1Q5TCY1 1321 aaPredicted RBP11.87□□□□□ -0.51
SCG5-201ENST00000300175 TNIKQ9UKE5 1360 aa11.86□□□□□ -0.51
SCG5-201ENST00000300175 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
SCG5-201ENST00000300175 APLP2Q06481 763 aa11.84□□□□□ -0.51
SCG5-201ENST00000300175 CTTNBP2Q8WZ74 1663 aa11.84□□□□□ -0.51
SCG5-201ENST00000300175 KDM6BO15054 1643 aa11.83□□□□□ -0.52
SCG5-201ENST00000300175 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
SCG5-201ENST00000300175 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
SCG5-201ENST00000300175 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
SCG5-201ENST00000300175 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
SCG5-201ENST00000300175 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
SCG5-201ENST00000300175 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
SCG5-201ENST00000300175 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
SCG5-201ENST00000300175 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
SCG5-201ENST00000300175 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
SCG5-201ENST00000300175 PPRC1Q5VV67 1664 aaKnown RBP11.78□□□□□ -0.52
SCG5-201ENST00000300175 GLI2P10070 1586 aa11.77□□□□□ -0.53
SCG5-201ENST00000300175 SPINK5Q9NQ38 1064 aaPredicted RBP11.76□□□□□ -0.53
SCG5-201ENST00000300175 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
SCG5-201ENST00000300175 CAPN15O75808 1086 aa11.74□□□□□ -0.53
SCG5-201ENST00000300175 MAP3K4Q9Y6R4 1608 aa11.74□□□□□ -0.53
SCG5-201ENST00000300175 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
SCG5-201ENST00000300175 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
SCG5-201ENST00000300175 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
SCG5-201ENST00000300175 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
SCG5-201ENST00000300175 ABCA8O94911 1581 aa11.68□□□□□ -0.54
SCG5-201ENST00000300175 TEX14Q8IWB6 1497 aa11.68□□□□□ -0.54
SCG5-201ENST00000300175 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
SCG5-201ENST00000300175 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
SCG5-201ENST00000300175 CFAP43Q8NDM7 1665 aa11.66□□□□□ -0.54
SCG5-201ENST00000300175 KDM4FA0A1W2PPD8 638 aa11.66□□□□□ -0.54
SCG5-201ENST00000300175 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
SCG5-201ENST00000300175 COL17A1Q9UMD9 1497 aaPredicted RBP11.63□□□□□ -0.55
SCG5-201ENST00000300175 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
SCG5-201ENST00000300175 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
SCG5-201ENST00000300175 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
SCG5-201ENST00000300175 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
SCG5-201ENST00000300175 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
SCG5-201ENST00000300175 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
SCG5-201ENST00000300175 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
SCG5-201ENST00000300175 RAPGEF6Q8TEU7 1601 aa11.58□□□□□ -0.56
SCG5-201ENST00000300175 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
SCG5-201ENST00000300175 EEA1Q15075 1411 aa11.57□□□□□ -0.56
SCG5-201ENST00000300175 ATP10BO94823 1461 aa11.56□□□□□ -0.56
SCG5-201ENST00000300175 ABCA9Q8IUA7 1624 aa11.55□□□□□ -0.56
SCG5-201ENST00000300175 DSG3P32926 999 aa11.54□□□□□ -0.56
SCG5-201ENST00000300175 RANGAP1P46060 587 aaPredicted RBP11.53□□□□□ -0.56
SCG5-201ENST00000300175 KIF21BO75037 1637 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms