RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
GBX1-201ENST00000297537 KIAA0586Q9BVV6 1533 aa39.36■■■■□ 3.89
GBX1-201ENST00000297537 JPH4Q96JJ6 628 aa39.36■■■■□ 3.89
GBX1-201ENST00000297537 PRXQ9BXM0 1461 aa39.29■■■■□ 3.88
GBX1-201ENST00000297537 ERCC6L2Q5T890 1561 aa39.29■■■■□ 3.88
GBX1-201ENST00000297537 EEA1Q15075 1411 aa39.26■■■■□ 3.88
GBX1-201ENST00000297537 CSRNP3Q8WYN3 585 aa39.26■■■■□ 3.88
GBX1-201ENST00000297537 PRG4Q92954 1404 aaPredicted RBP39.23■■■■□ 3.87
GBX1-201ENST00000297537 IQGAP2Q13576 1575 aa39.08■■■■□ 3.85
GBX1-201ENST00000297537 FAM9AQ8IZU1 332 aaPredicted RBP39.05■■■■□ 3.84
GBX1-201ENST00000297537 UGGT2Q9NYU1 1516 aa38.93■■■■□ 3.82
GBX1-201ENST00000297537 CTTNBP2Q8WZ74 1663 aa38.9■■■■□ 3.82
GBX1-201ENST00000297537 CARMIL2Q6F5E8 1435 aa38.89■■■■□ 3.82
GBX1-201ENST00000297537 DISP1Q96F81 1524 aa38.88■■■■□ 3.81
GBX1-201ENST00000297537 KIF21BO75037 1637 aa38.81■■■■□ 3.8
GBX1-201ENST00000297537 TNIKQ9UKE5 1360 aa38.81■■■■□ 3.8
GBX1-201ENST00000297537 PTPRGP23470 1445 aa38.78■■■■□ 3.8
GBX1-201ENST00000297537 KIAA0556O60303 1618 aa38.71■■■■□ 3.79
GBX1-201ENST00000297537 GOLGA3Q08378 1498 aa38.66■■■■□ 3.78
GBX1-201ENST00000297537 TTBK1Q5TCY1 1321 aaPredicted RBP38.62■■■■□ 3.77
GBX1-201ENST00000297537 ADCY10Q96PN6 1610 aa38.61■■■■□ 3.77
GBX1-201ENST00000297537 TRHP20396 242 aaPredicted RBP38.52■■■■□ 3.76
GBX1-201ENST00000297537 UACAQ9BZF9 1416 aa38.52■■■■□ 3.76
GBX1-201ENST00000297537 UHRF1BP1LA0JNW5 1464 aa38.5■■■■□ 3.75
GBX1-201ENST00000297537 UBTFP17480 764 aaKnown RBP38.5■■■■□ 3.75
GBX1-201ENST00000297537 EHMT2Q96KQ7 1210 aa38.5■■■■□ 3.75
GBX1-201ENST00000297537 NPM1P06748 294 aaKnown RBP eCLIP38.49■■■■□ 3.75
GBX1-201ENST00000297537 SAMD9Q5K651 1589 aa38.48■■■■□ 3.75
GBX1-201ENST00000297537 P3H3Q8IVL6 736 aa38.44■■■■□ 3.74
GBX1-201ENST00000297537 ABCC2Q92887 1545 aa38.43■■■■□ 3.74
GBX1-201ENST00000297537 MAPKBP1O60336 1514 aa38.38■■■■□ 3.74
GBX1-201ENST00000297537 RANGAP1P46060 587 aaPredicted RBP38.38■■■■□ 3.73
GBX1-201ENST00000297537 PLB1Q6P1J6 1458 aa38.37■■■■□ 3.73
GBX1-201ENST00000297537 ABCA8O94911 1581 aa38.33■■■■□ 3.73
GBX1-201ENST00000297537 KDM5BQ9UGL1 1544 aa38.32■■■■□ 3.72
GBX1-201ENST00000297537 EFCAB5A4FU69 1503 aa38.3■■■■□ 3.72
GBX1-201ENST00000297537 FHOD3Q2V2M9 1422 aa38.26■■■■□ 3.72
GBX1-201ENST00000297537 ABCC10Q5T3U5 1492 aa38.23■■■■□ 3.71
GBX1-201ENST00000297537 ASXL2Q76L83 1435 aa38.18■■■■□ 3.7
GBX1-201ENST00000297537 ZCCHC11Q5TAX3 1644 aaKnown RBP38.16■■■■□ 3.7
GBX1-201ENST00000297537 ARHGAP35Q9NRY4 1499 aa38.16■■■■□ 3.7
GBX1-201ENST00000297537 KIF13AQ9H1H9 1805 aa38.15■■■■□ 3.7
GBX1-201ENST00000297537 FAM69CQ0P6D2 419 aa38.14■■■■□ 3.7
GBX1-201ENST00000297537 DIP2BQ9P265 1576 aa38.12■■■■□ 3.69
GBX1-201ENST00000297537 RAPGEF6Q8TEU7 1601 aa38.08■■■■□ 3.69
GBX1-201ENST00000297537 ATP10BO94823 1461 aa38.05■■■■□ 3.68
GBX1-201ENST00000297537 NUP153P49790 1475 aaKnown RBP38.01■■■■□ 3.67
GBX1-201ENST00000297537 WDR7Q9Y4E6 1490 aa37.97■■■■□ 3.67
GBX1-201ENST00000297537 FMN1Q68DA7 1419 aa37.97■■■■□ 3.67
GBX1-201ENST00000297537 ARID3CA6NKF2 412 aa37.96■■■■□ 3.67
GBX1-201ENST00000297537 GLI2P10070 1586 aa37.96■■■■□ 3.67
GBX1-201ENST00000297537 EPRSP07814 1512 aaKnown RBP37.96■■■■□ 3.67
GBX1-201ENST00000297537 CLIP1P30622 1438 aa37.91■■■■□ 3.66
GBX1-201ENST00000297537 LOC105371045A0A1W2PR82 267 aa37.9■■■■□ 3.66
GBX1-201ENST00000297537 KCNH8Q96L42 1107 aa37.81■■■■□ 3.64
GBX1-201ENST00000297537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.8■■■■□ 3.64
GBX1-201ENST00000297537 HNRNPUL2Q1KMD3 747 aaKnown RBP37.8■■■■□ 3.64
GBX1-201ENST00000297537 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
GBX1-201ENST00000297537 MAP3K4Q9Y6R4 1608 aa37.75■■■■□ 3.63
GBX1-201ENST00000297537 HECW1Q76N89 1606 aa37.72■■■■□ 3.63
GBX1-201ENST00000297537 TSPOAP1O95153 1857 aa37.72■■■■□ 3.63
GBX1-201ENST00000297537 PLEKHD1A6NEE1 506 aa37.7■■■■□ 3.63
GBX1-201ENST00000297537 ATP1B4Q9UN42 357 aaPredicted RBP37.7■■■■□ 3.63
GBX1-201ENST00000297537 CASKIN1Q8WXD9 1431 aa37.7■■■■□ 3.62
GBX1-201ENST00000297537 CDK13Q14004 1512 aaKnown RBP37.69■■■■□ 3.62
GBX1-201ENST00000297537 PPRC1Q5VV67 1664 aaKnown RBP37.69■■■■□ 3.62
GBX1-201ENST00000297537 CD109Q6YHK3 1445 aa37.64■■■■□ 3.62
GBX1-201ENST00000297537 PCF11O94913 1555 aaKnown RBP37.62■■■■□ 3.61
GBX1-201ENST00000297537 CFAP43Q8NDM7 1665 aa37.62■■■■□ 3.61
GBX1-201ENST00000297537 MAGI3Q5TCQ9 1506 aa37.58■■■■□ 3.61
GBX1-201ENST00000297537 FYCO1Q9BQS8 1478 aa37.58■■■■□ 3.61
GBX1-201ENST00000297537 ABCA9Q8IUA7 1624 aa37.58■■■■□ 3.61
GBX1-201ENST00000297537 LRRIQ1Q96JM4 1722 aa37.56■■■■□ 3.6
GBX1-201ENST00000297537 TEX14Q8IWB6 1497 aa37.56■■■■□ 3.6
GBX1-201ENST00000297537 CDK11AQ9UQ88 783 aaPredicted RBP37.54■■■■□ 3.6
GBX1-201ENST00000297537 CCDC18Q5T9S5 1454 aa37.51■■■■□ 3.59
GBX1-201ENST00000297537 KDM6BO15054 1643 aa37.46■■■■□ 3.59
GBX1-201ENST00000297537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.44■■■■□ 3.58
GBX1-201ENST00000297537 COL17A1Q9UMD9 1497 aaPredicted RBP37.43■■■■□ 3.58
GBX1-201ENST00000297537 TROQ12816 1431 aaPredicted RBP37.43■■■■□ 3.58
GBX1-201ENST00000297537 TTC37Q6PGP7 1564 aa37.34■■■■□ 3.57
GBX1-201ENST00000297537 PHLDB1Q86UU1 1377 aa37.32■■■■□ 3.57
GBX1-201ENST00000297537 VPS8Q8N3P4 1428 aa37.31■■■■□ 3.56
GBX1-201ENST00000297537 NEO1Q92859 1461 aa37.29■■■■□ 3.56
GBX1-201ENST00000297537 KIF14Q15058 1648 aa37.28■■■■□ 3.56
GBX1-201ENST00000297537 ARAP3Q8WWN8 1544 aa37.26■■■■□ 3.56
GBX1-201ENST00000297537 PLCH2O75038 1416 aa37.26■■■■□ 3.55
GBX1-201ENST00000297537 FANCAO15360 1455 aa37.19■■■■□ 3.54
GBX1-201ENST00000297537 AKNAQ7Z591 1439 aa37.15■■■■□ 3.54
GBX1-201ENST00000297537 MTUS2Q5JR59 1369 aa37.12■■■■□ 3.53
GBX1-201ENST00000297537 MYO5CQ9NQX4 1742 aa37.11■■■■□ 3.53
GBX1-201ENST00000297537 CFAP74Q9C0B2 1584 aa37.1■■■■□ 3.53
GBX1-201ENST00000297537 EFCAB2Q5VUJ9 269 aa37.1■■■■□ 3.53
GBX1-201ENST00000297537 RAPGEF3O95398 923 aa37.07■■■■□ 3.52
GBX1-201ENST00000297537 TIAM1Q13009 1591 aa37.05■■■■□ 3.52
GBX1-201ENST00000297537 EHBP1L1Q8N3D4 1523 aa37.03■■■■□ 3.52
GBX1-201ENST00000297537 MAP3K1Q13233 1512 aa37.02■■■■□ 3.52
GBX1-201ENST00000297537 DENND4BO75064 1496 aaPredicted RBP37.01■■■■□ 3.52
GBX1-201ENST00000297537 CDC42BPBQ9Y5S2 1711 aa37.01■■■■□ 3.51
GBX1-201ENST00000297537 ARHGAP5Q13017 1502 aa37■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms