RNA–Protein interactions for RNA: ENST00000295901.8

PSMD6-201, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD6, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-201ENST00000295901 KIF21BO75037 1637 aa32.05■■■□□ 2.72
PSMD6-201ENST00000295901 CLASP1Q7Z460 1538 aa32.02■■■□□ 2.72
PSMD6-201ENST00000295901 GRIN2AQ12879 1464 aa31.99■■■□□ 2.71
PSMD6-201ENST00000295901 TRHP20396 242 aaPredicted RBP31.99■■■□□ 2.71
PSMD6-201ENST00000295901 GOLGA3Q08378 1498 aa31.97■■■□□ 2.71
PSMD6-201ENST00000295901 EHMT2Q96KQ7 1210 aa31.93■■■□□ 2.7
PSMD6-201ENST00000295901 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
PSMD6-201ENST00000295901 UBTFP17480 764 aaKnown RBP31.86■■■□□ 2.69
PSMD6-201ENST00000295901 NUP160Q12769 1436 aa31.83■■■□□ 2.69
PSMD6-201ENST00000295901 CEP170Q5SW79 1584 aa31.76■■■□□ 2.67
PSMD6-201ENST00000295901 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
PSMD6-201ENST00000295901 KIAA0586Q9BVV6 1533 aa31.73■■■□□ 2.67
PSMD6-201ENST00000295901 CTTNBP2Q8WZ74 1663 aa31.63■■■□□ 2.65
PSMD6-201ENST00000295901 IQGAP2Q13576 1575 aa31.61■■■□□ 2.65
PSMD6-201ENST00000295901 ERCC6L2Q5T890 1561 aa31.58■■■□□ 2.65
PSMD6-201ENST00000295901 JPH4Q96JJ6 628 aa31.57■■■□□ 2.64
PSMD6-201ENST00000295901 UGGT2Q9NYU1 1516 aa31.49■■■□□ 2.63
PSMD6-201ENST00000295901 RANGAP1P46060 587 aaPredicted RBP31.49■■■□□ 2.63
PSMD6-201ENST00000295901 CEP162Q5TB80 1403 aa31.45■■■□□ 2.63
PSMD6-201ENST00000295901 SHROOM2Q13796 1616 aa31.44■■■□□ 2.62
PSMD6-201ENST00000295901 CLIP1P30622 1438 aa31.43■■■□□ 2.62
PSMD6-201ENST00000295901 PRG4Q92954 1404 aaPredicted RBP31.4■■■□□ 2.62
PSMD6-201ENST00000295901 EFCAB5A4FU69 1503 aa31.37■■■□□ 2.61
PSMD6-201ENST00000295901 CARMIL2Q6F5E8 1435 aa31.37■■■□□ 2.61
PSMD6-201ENST00000295901 DISP1Q96F81 1524 aa31.36■■■□□ 2.61
PSMD6-201ENST00000295901 ARHGAP35Q9NRY4 1499 aa31.35■■■□□ 2.61
PSMD6-201ENST00000295901 SAMD9Q5K651 1589 aa31.33■■■□□ 2.61
PSMD6-201ENST00000295901 P3H3Q8IVL6 736 aa31.31■■■□□ 2.6
PSMD6-201ENST00000295901 KIAA0556O60303 1618 aa31.29■■■□□ 2.6
PSMD6-201ENST00000295901 FHOD3Q2V2M9 1422 aa31.23■■■□□ 2.59
PSMD6-201ENST00000295901 KIF13AQ9H1H9 1805 aa31.15■■■□□ 2.58
PSMD6-201ENST00000295901 PTPRGP23470 1445 aa31.14■■■□□ 2.58
PSMD6-201ENST00000295901 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
PSMD6-201ENST00000295901 FMN1Q68DA7 1419 aa31.1■■■□□ 2.57
PSMD6-201ENST00000295901 TTBK1Q5TCY1 1321 aaPredicted RBP31.1■■■□□ 2.57
PSMD6-201ENST00000295901 VPS8Q8N3P4 1428 aa31.04■■■□□ 2.56
PSMD6-201ENST00000295901 NPM1P06748 294 aaKnown RBP eCLIP30.97■■■□□ 2.55
PSMD6-201ENST00000295901 PLB1Q6P1J6 1458 aa30.95■■■□□ 2.55
PSMD6-201ENST00000295901 ADCY10Q96PN6 1610 aa30.95■■■□□ 2.54
PSMD6-201ENST00000295901 CASKIN1Q8WXD9 1431 aa30.94■■■□□ 2.54
PSMD6-201ENST00000295901 UACAQ9BZF9 1416 aa30.94■■■□□ 2.54
PSMD6-201ENST00000295901 ABCA8O94911 1581 aa30.92■■■□□ 2.54
PSMD6-201ENST00000295901 FAM69CQ0P6D2 419 aa30.91■■■□□ 2.54
PSMD6-201ENST00000295901 FYCO1Q9BQS8 1478 aa30.88■■■□□ 2.53
PSMD6-201ENST00000295901 RAPGEF6Q8TEU7 1601 aa30.88■■■□□ 2.53
PSMD6-201ENST00000295901 ABCC10Q5T3U5 1492 aa30.87■■■□□ 2.53
PSMD6-201ENST00000295901 PCF11O94913 1555 aaKnown RBP30.87■■■□□ 2.53
PSMD6-201ENST00000295901 ATP1B4Q9UN42 357 aaPredicted RBP30.87■■■□□ 2.53
PSMD6-201ENST00000295901 MAPKBP1O60336 1514 aa30.86■■■□□ 2.53
PSMD6-201ENST00000295901 UHRF1BP1LA0JNW5 1464 aa30.86■■■□□ 2.53
PSMD6-201ENST00000295901 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
PSMD6-201ENST00000295901 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
PSMD6-201ENST00000295901 NUP153P49790 1475 aaKnown RBP30.82■■■□□ 2.52
PSMD6-201ENST00000295901 HECW1Q76N89 1606 aa30.8■■■□□ 2.52
PSMD6-201ENST00000295901 TSPOAP1O95153 1857 aa30.79■■■□□ 2.52
PSMD6-201ENST00000295901 EPRSP07814 1512 aaKnown RBP30.74■■■□□ 2.51
PSMD6-201ENST00000295901 APLP2Q06481 763 aa30.73■■■□□ 2.51
PSMD6-201ENST00000295901 ARID3CA6NKF2 412 aa30.73■■■□□ 2.51
PSMD6-201ENST00000295901 CCDC18Q5T9S5 1454 aa30.72■■■□□ 2.51
PSMD6-201ENST00000295901 ATP10BO94823 1461 aa30.71■■■□□ 2.51
PSMD6-201ENST00000295901 KDM5BQ9UGL1 1544 aa30.71■■■□□ 2.51
PSMD6-201ENST00000295901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.67■■■□□ 2.5
PSMD6-201ENST00000295901 HNRNPUL2Q1KMD3 747 aaKnown RBP30.67■■■□□ 2.5
PSMD6-201ENST00000295901 MAP3K1Q13233 1512 aa30.67■■■□□ 2.5
PSMD6-201ENST00000295901 CDK13Q14004 1512 aaKnown RBP30.66■■■□□ 2.5
PSMD6-201ENST00000295901 LRRIQ1Q96JM4 1722 aa30.63■■■□□ 2.49
PSMD6-201ENST00000295901 KDM6BO15054 1643 aa30.62■■■□□ 2.49
PSMD6-201ENST00000295901 TIAM1Q13009 1591 aa30.61■■■□□ 2.49
PSMD6-201ENST00000295901 CDK11AQ9UQ88 783 aaPredicted RBP30.61■■■□□ 2.49
PSMD6-201ENST00000295901 ZCCHC11Q5TAX3 1644 aaKnown RBP30.58■■■□□ 2.49
PSMD6-201ENST00000295901 PLEKHD1A6NEE1 506 aa30.56■■■□□ 2.48
PSMD6-201ENST00000295901 CFAP43Q8NDM7 1665 aa30.55■■■□□ 2.48
PSMD6-201ENST00000295901 KANK4Q5T7N3 995 aaPredicted RBP30.54■■■□□ 2.48
PSMD6-201ENST00000295901 ASXL2Q76L83 1435 aa30.52■■■□□ 2.48
PSMD6-201ENST00000295901 LRRC9Q6ZRR7 1453 aa30.51■■■□□ 2.47
PSMD6-201ENST00000295901 MTUS2Q5JR59 1369 aa30.5■■■□□ 2.47
PSMD6-201ENST00000295901 TROQ12816 1431 aaPredicted RBP30.47■■■□□ 2.47
PSMD6-201ENST00000295901 MAGI3Q5TCQ9 1506 aa30.47■■■□□ 2.47
PSMD6-201ENST00000295901 PPRC1Q5VV67 1664 aaKnown RBP30.44■■■□□ 2.46
PSMD6-201ENST00000295901 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
PSMD6-201ENST00000295901 WDR7Q9Y4E6 1490 aa30.43■■■□□ 2.46
PSMD6-201ENST00000295901 GLI2P10070 1586 aa30.42■■■□□ 2.46
PSMD6-201ENST00000295901 PPARGC1BQ86YN6 1023 aaKnown RBP30.41■■■□□ 2.46
PSMD6-201ENST00000295901 KDM4FA0A1W2PPD8 638 aa30.39■■■□□ 2.45
PSMD6-201ENST00000295901 KCNH8Q96L42 1107 aa30.36■■■□□ 2.45
PSMD6-201ENST00000295901 MAP3K4Q9Y6R4 1608 aa30.3■■■□□ 2.44
PSMD6-201ENST00000295901 KIF14Q15058 1648 aa30.29■■■□□ 2.44
PSMD6-201ENST00000295901 NCOA2Q15596 1464 aa30.28■■■□□ 2.44
PSMD6-201ENST00000295901 SUPT6HQ7KZ85 1726 aaKnown RBP30.27■■■□□ 2.44
PSMD6-201ENST00000295901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.21■■■□□ 2.432e-6■■■□□ 16.1
PSMD6-201ENST00000295901 COL17A1Q9UMD9 1497 aaPredicted RBP30.21■■■□□ 2.43
PSMD6-201ENST00000295901 CCNB3Q8WWL7 1395 aa30.18■■■□□ 2.42
PSMD6-201ENST00000295901 TEX14Q8IWB6 1497 aa30.18■■■□□ 2.42
PSMD6-201ENST00000295901 PHLDB1Q86UU1 1377 aa30.17■■■□□ 2.42
PSMD6-201ENST00000295901 ABCA9Q8IUA7 1624 aa30.14■■■□□ 2.42
PSMD6-201ENST00000295901 GPATCH8Q9UKJ3 1502 aaKnown RBP30.14■■■□□ 2.42
PSMD6-201ENST00000295901 TTC37Q6PGP7 1564 aa30.13■■■□□ 2.41
PSMD6-201ENST00000295901 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
PSMD6-201ENST00000295901 ADGRL1O94910 1474 aa30.09■■■□□ 2.41
PSMD6-201ENST00000295901 PLCH2O75038 1416 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms