RNA–Protein interactions for RNA: ENST00000295901.8

PSMD6-201, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD6, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-201ENST00000295901 NISCHQ9Y2I1 1504 aa46.07■■■■■ 4.96
PSMD6-201ENST00000295901 CCDC180Q9P1Z9 1646 aa40.52■■■■■ 4.08
PSMD6-201ENST00000295901 ABCC9O60706 1549 aa40.13■■■■■ 4.02
PSMD6-201ENST00000295901 ZCCHC6Q5VYS8 1495 aaKnown RBP38.52■■■■□ 3.76
PSMD6-201ENST00000295901 DCAF8L2P0C7V8 631 aa38.23■■■■□ 3.71
PSMD6-201ENST00000295901 DCAF1Q9Y4B6 1507 aa38.15■■■■□ 3.7
PSMD6-201ENST00000295901 RB1CC1Q8TDY2 1594 aa38.1■■■■□ 3.69
PSMD6-201ENST00000295901 MYO15BQ96JP2 1530 aa38.04■■■■□ 3.68
PSMD6-201ENST00000295901 NACADO15069 1562 aa37.98■■■■□ 3.67
PSMD6-201ENST00000295901 DNAJC5BQ9UF47 199 aa37.75■■■■□ 3.63
PSMD6-201ENST00000295901 UNC13AQ9UPW8 1703 aa37.38■■■■□ 3.57
PSMD6-201ENST00000295901 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.57
PSMD6-201ENST00000295901 SCRIBQ14160 1630 aa37.06■■■■□ 3.52
PSMD6-201ENST00000295901 BICRAQ9NZM4 1560 aa37.02■■■■□ 3.52
PSMD6-201ENST00000295901 SHROOM4Q9ULL8 1493 aa36.88■■■■□ 3.49
PSMD6-201ENST00000295901 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
PSMD6-201ENST00000295901 CECR2Q9BXF3 1484 aa36.13■■■■□ 3.37
PSMD6-201ENST00000295901 EIF4G1Q04637 1599 aaKnown RBP36.11■■■■□ 3.37
PSMD6-201ENST00000295901 BAZ1AQ9NRL2 1556 aaPredicted RBP35.63■■■■□ 3.29
PSMD6-201ENST00000295901 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
PSMD6-201ENST00000295901 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
PSMD6-201ENST00000295901 RSF1Q96T23 1441 aaPredicted RBP35.42■■■■□ 3.26
PSMD6-201ENST00000295901 ATAD2BQ9ULI0 1458 aa35.21■■■■□ 3.23
PSMD6-201ENST00000295901 PEG3Q9GZU2 1588 aa35.2■■■■□ 3.23
PSMD6-201ENST00000295901 SMARCA2P51531 1590 aa35.17■■■■□ 3.22
PSMD6-201ENST00000295901 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
PSMD6-201ENST00000295901 WIZO95785 1651 aa35.12■■■■□ 3.21
PSMD6-201ENST00000295901 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
PSMD6-201ENST00000295901 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
PSMD6-201ENST00000295901 HMGXB3Q12766 1538 aa34.93■■■■□ 3.18
PSMD6-201ENST00000295901 TOP2AP11388 1531 aaKnown RBP34.82■■■■□ 3.16
PSMD6-201ENST00000295901 DNAJC5Q9H3Z4 198 aa34.69■■■■□ 3.14
PSMD6-201ENST00000295901 ERCC6Q03468 1493 aa34.63■■■■□ 3.13
PSMD6-201ENST00000295901 CUX2O14529 1486 aa34.55■■■■□ 3.12
PSMD6-201ENST00000295901 NESP48681 1621 aa34.45■■■■□ 3.11
PSMD6-201ENST00000295901 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.11
PSMD6-201ENST00000295901 LAMC3Q9Y6N6 1575 aa34.14■■■■□ 3.06
PSMD6-201ENST00000295901 CADPSQ9ULU8 1353 aa34.12■■■■□ 3.05
PSMD6-201ENST00000295901 THOC2Q8NI27 1593 aaKnown RBP34.09■■■■□ 3.05
PSMD6-201ENST00000295901 CFTRP13569 1480 aa34.05■■■■□ 3.04
PSMD6-201ENST00000295901 KIF21AQ7Z4S6 1674 aa34.05■■■■□ 3.04
PSMD6-201ENST00000295901 PDS5BQ9NTI5 1447 aa33.93■■■■□ 3.02
PSMD6-201ENST00000295901 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
PSMD6-201ENST00000295901 PRDM2Q13029 1718 aa33.69■■■□□ 2.98
PSMD6-201ENST00000295901 MRC2Q9UBG0 1479 aa33.65■■■□□ 2.98
PSMD6-201ENST00000295901 WDR62O43379 1518 aa33.57■■■□□ 2.96
PSMD6-201ENST00000295901 CEP164Q9UPV0 1460 aa33.56■■■□□ 2.96
PSMD6-201ENST00000295901 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
PSMD6-201ENST00000295901 WRNQ14191 1432 aaPredicted RBP eCLIP33.37■■■□□ 2.93
PSMD6-201ENST00000295901 URB2Q14146 1524 aaKnown RBP33.29■■■□□ 2.92
PSMD6-201ENST00000295901 CHIC1Q5VXU3 224 aa33.26■■■□□ 2.91
PSMD6-201ENST00000295901 CUX1P39880 1505 aa33.25■■■□□ 2.91
PSMD6-201ENST00000295901 DNMBPQ6XZF7 1577 aa33.23■■■□□ 2.91
PSMD6-201ENST00000295901 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
PSMD6-201ENST00000295901 TRIM41Q8WV44 630 aa33.22■■■□□ 2.91
PSMD6-201ENST00000295901 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
PSMD6-201ENST00000295901 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
PSMD6-201ENST00000295901 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
PSMD6-201ENST00000295901 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
PSMD6-201ENST00000295901 POLA1P09884 1462 aaPredicted RBP33■■■□□ 2.87
PSMD6-201ENST00000295901 OSCARQ8IYS5 282 aa33■■■□□ 2.87
PSMD6-201ENST00000295901 SOGA1O94964 1423 aa32.92■■■□□ 2.86
PSMD6-201ENST00000295901 RAD54L2Q9Y4B4 1467 aa32.85■■■□□ 2.85
PSMD6-201ENST00000295901 IFT140Q96RY7 1462 aa32.84■■■□□ 2.85
PSMD6-201ENST00000295901 ZNF608Q9ULD9 1512 aaPredicted RBP32.83■■■□□ 2.85
PSMD6-201ENST00000295901 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
PSMD6-201ENST00000295901 ABCA10Q8WWZ4 1543 aa32.77■■■□□ 2.84
PSMD6-201ENST00000295901 EIF4G3O43432 1585 aaKnown RBP32.64■■■□□ 2.82
PSMD6-201ENST00000295901 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
PSMD6-201ENST00000295901 TDRD9Q8NDG6 1382 aaKnown RBP32.63■■■□□ 2.81
PSMD6-201ENST00000295901 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
PSMD6-201ENST00000295901 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
PSMD6-201ENST00000295901 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
PSMD6-201ENST00000295901 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
PSMD6-201ENST00000295901 AQRO60306 1485 aaKnown RBP eCLIP32.55■■■□□ 2.86e-6■■■■□ 23.2
PSMD6-201ENST00000295901 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
PSMD6-201ENST00000295901 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
PSMD6-201ENST00000295901 EEA1Q15075 1411 aa32.52■■■□□ 2.8
PSMD6-201ENST00000295901 ABCA5Q8WWZ7 1642 aa32.5■■■□□ 2.79
PSMD6-201ENST00000295901 CHD1O14646 1710 aa32.5■■■□□ 2.79
PSMD6-201ENST00000295901 ARHGEF11O15085 1522 aa32.47■■■□□ 2.79
PSMD6-201ENST00000295901 FAM9AQ8IZU1 332 aaPredicted RBP32.43■■■□□ 2.78
PSMD6-201ENST00000295901 IGF1RP08069 1367 aa32.42■■■□□ 2.78
PSMD6-201ENST00000295901 GRIN2BQ13224 1484 aa32.41■■■□□ 2.78
PSMD6-201ENST00000295901 CSRNP3Q8WYN3 585 aa32.4■■■□□ 2.78
PSMD6-201ENST00000295901 FBLN2P98095 1184 aa32.38■■■□□ 2.77
PSMD6-201ENST00000295901 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
PSMD6-201ENST00000295901 CYB5RLQ6IPT4 315 aa32.29■■■□□ 2.76
PSMD6-201ENST00000295901 PBRM1Q86U86 1689 aa32.29■■■□□ 2.76
PSMD6-201ENST00000295901 SNAPC4Q5SXM2 1469 aa32.24■■■□□ 2.75
PSMD6-201ENST00000295901 MAGI1Q96QZ7 1491 aaPredicted RBP32.24■■■□□ 2.75
PSMD6-201ENST00000295901 CARMIL1Q5VZK9 1371 aa32.23■■■□□ 2.75
PSMD6-201ENST00000295901 FHAD1B1AJZ9 1412 aa32.19■■■□□ 2.74
PSMD6-201ENST00000295901 PRXQ9BXM0 1461 aa32.19■■■□□ 2.74
PSMD6-201ENST00000295901 CUL7Q14999 1698 aa32.18■■■□□ 2.74
PSMD6-201ENST00000295901 ARAP1Q96P48 1450 aa32.14■■■□□ 2.74
PSMD6-201ENST00000295901 ADAMTS12P58397 1594 aa32.14■■■□□ 2.74
PSMD6-201ENST00000295901 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
PSMD6-201ENST00000295901 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
PSMD6-201ENST00000295901 CHMP7Q8WUX9 453 aaPredicted RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms