RNA–Protein interactions for RNA: ENST00000295290.12

PACRGL-201, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-201ENST00000295290 CEP162Q5TB80 1403 aa35.84■■■■□ 3.33
PACRGL-201ENST00000295290 CEP170Q5SW79 1584 aa35.82■■■■□ 3.32
PACRGL-201ENST00000295290 NUP160Q12769 1436 aa35.81■■■■□ 3.32
PACRGL-201ENST00000295290 KIAA0586Q9BVV6 1533 aa35.73■■■■□ 3.31
PACRGL-201ENST00000295290 RANGAP1P46060 587 aaPredicted RBP35.73■■■■□ 3.31
PACRGL-201ENST00000295290 IQGAP2Q13576 1575 aa35.71■■■■□ 3.31
PACRGL-201ENST00000295290 CLIP1P30622 1438 aa35.71■■■■□ 3.31
PACRGL-201ENST00000295290 ARHGAP35Q9NRY4 1499 aa35.58■■■■□ 3.29
PACRGL-201ENST00000295290 UGGT2Q9NYU1 1516 aa35.54■■■■□ 3.28
PACRGL-201ENST00000295290 EFCAB5A4FU69 1503 aa35.51■■■■□ 3.28
PACRGL-201ENST00000295290 CLASP1Q7Z460 1538 aa35.51■■■■□ 3.27
PACRGL-201ENST00000295290 SAMD9Q5K651 1589 aa35.51■■■■□ 3.27
PACRGL-201ENST00000295290 JPH4Q96JJ6 628 aa35.47■■■■□ 3.27
PACRGL-201ENST00000295290 ARAP1Q96P48 1450 aa35.47■■■■□ 3.27
PACRGL-201ENST00000295290 OSCARQ8IYS5 282 aa35.44■■■■□ 3.26
PACRGL-201ENST00000295290 P3H3Q8IVL6 736 aa35.42■■■■□ 3.26
PACRGL-201ENST00000295290 DISP1Q96F81 1524 aa35.41■■■■□ 3.26
PACRGL-201ENST00000295290 SHROOM2Q13796 1616 aa35.4■■■■□ 3.26
PACRGL-201ENST00000295290 FHOD3Q2V2M9 1422 aa35.37■■■■□ 3.25
PACRGL-201ENST00000295290 KIAA0556O60303 1618 aa35.36■■■■□ 3.25
PACRGL-201ENST00000295290 VPS8Q8N3P4 1428 aa35.31■■■■□ 3.24
PACRGL-201ENST00000295290 PRG4Q92954 1404 aaPredicted RBP35.3■■■■□ 3.24
PACRGL-201ENST00000295290 CARMIL2Q6F5E8 1435 aa35.28■■■■□ 3.24
PACRGL-201ENST00000295290 ERCC6L2Q5T890 1561 aa35.19■■■■□ 3.22
PACRGL-201ENST00000295290 FMN1Q68DA7 1419 aa35.18■■■■□ 3.22
PACRGL-201ENST00000295290 PCF11O94913 1555 aaKnown RBP35.09■■■■□ 3.21
PACRGL-201ENST00000295290 TTBK1Q5TCY1 1321 aaPredicted RBP35.07■■■■□ 3.21
PACRGL-201ENST00000295290 CASKIN1Q8WXD9 1431 aa35.05■■■■□ 3.2
PACRGL-201ENST00000295290 FYCO1Q9BQS8 1478 aa35.02■■■■□ 3.2
PACRGL-201ENST00000295290 PTPRGP23470 1445 aa35.01■■■■□ 3.19
PACRGL-201ENST00000295290 PLB1Q6P1J6 1458 aa34.95■■■■□ 3.19
PACRGL-201ENST00000295290 RAPGEF6Q8TEU7 1601 aa34.93■■■■□ 3.18
PACRGL-201ENST00000295290 ATP1B4Q9UN42 357 aaPredicted RBP34.92■■■■□ 3.18
PACRGL-201ENST00000295290 ABCA8O94911 1581 aa34.9■■■■□ 3.18
PACRGL-201ENST00000295290 HECW1Q76N89 1606 aa34.89■■■■□ 3.18
PACRGL-201ENST00000295290 ARHGEF11O15085 1522 aa34.88■■■■□ 3.17
PACRGL-201ENST00000295290 APLP2Q06481 763 aa34.87■■■■□ 3.17
PACRGL-201ENST00000295290 LRRIQ1Q96JM4 1722 aa34.87■■■■□ 3.17
PACRGL-201ENST00000295290 NUP153P49790 1475 aaKnown RBP34.84■■■■□ 3.17
PACRGL-201ENST00000295290 MAP3K1Q13233 1512 aa34.82■■■■□ 3.16
PACRGL-201ENST00000295290 TIAM1Q13009 1591 aa34.82■■■■□ 3.16
PACRGL-201ENST00000295290 UACAQ9BZF9 1416 aa34.81■■■■□ 3.16
PACRGL-201ENST00000295290 PPARGC1BQ86YN6 1023 aaKnown RBP34.79■■■■□ 3.16
PACRGL-201ENST00000295290 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
PACRGL-201ENST00000295290 EPRSP07814 1512 aaKnown RBP34.79■■■■□ 3.16
PACRGL-201ENST00000295290 RIMBP3CA6NJZ7 1639 aa34.76■■■■□ 3.16
PACRGL-201ENST00000295290 RIMBP3BA6NNM3 1639 aa34.76■■■■□ 3.16
PACRGL-201ENST00000295290 RIMBP3Q9UFD9 1639 aa34.76■■■■□ 3.16
PACRGL-201ENST00000295290 CCDC18Q5T9S5 1454 aa34.76■■■■□ 3.15
PACRGL-201ENST00000295290 CDK13Q14004 1512 aaKnown RBP34.73■■■■□ 3.15
PACRGL-201ENST00000295290 ABCC2Q92887 1545 aa34.73■■■■□ 3.15
PACRGL-201ENST00000295290 ARID3CA6NKF2 412 aa34.73■■■■□ 3.15
PACRGL-201ENST00000295290 KANK4Q5T7N3 995 aaPredicted RBP34.72■■■■□ 3.15
PACRGL-201ENST00000295290 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.14
PACRGL-201ENST00000295290 LRRC9Q6ZRR7 1453 aa34.66■■■■□ 3.14
PACRGL-201ENST00000295290 ATP10BO94823 1461 aa34.64■■■■□ 3.14
PACRGL-201ENST00000295290 ADCY10Q96PN6 1610 aa34.63■■■■□ 3.13
PACRGL-201ENST00000295290 MAGI3Q5TCQ9 1506 aa34.59■■■■□ 3.13
PACRGL-201ENST00000295290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.58■■■■□ 3.13
PACRGL-201ENST00000295290 HNRNPUL2Q1KMD3 747 aaKnown RBP34.58■■■■□ 3.13
PACRGL-201ENST00000295290 KDM5BQ9UGL1 1544 aa34.55■■■■□ 3.12
PACRGL-201ENST00000295290 MTUS2Q5JR59 1369 aa34.53■■■■□ 3.12
PACRGL-201ENST00000295290 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
PACRGL-201ENST00000295290 ZCCHC11Q5TAX3 1644 aaKnown RBP34.51■■■■□ 3.11
PACRGL-201ENST00000295290 EHBP1L1Q8N3D4 1523 aa34.5■■■■□ 3.11
PACRGL-201ENST00000295290 CDK11AQ9UQ88 783 aaPredicted RBP34.49■■■■□ 3.11
PACRGL-201ENST00000295290 TROQ12816 1431 aaPredicted RBP34.42■■■■□ 3.1
PACRGL-201ENST00000295290 PLEKHD1A6NEE1 506 aa34.41■■■■□ 3.1
PACRGL-201ENST00000295290 SUPT6HQ7KZ85 1726 aaKnown RBP34.38■■■■□ 3.09
PACRGL-201ENST00000295290 NCOA2Q15596 1464 aa34.35■■■■□ 3.09
PACRGL-201ENST00000295290 NPM1P06748 294 aaKnown RBP eCLIP34.32■■■■□ 3.08
PACRGL-201ENST00000295290 PHLDB1Q86UU1 1377 aa34.31■■■■□ 3.08
PACRGL-201ENST00000295290 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
PACRGL-201ENST00000295290 KIF14Q15058 1648 aa34.29■■■■□ 3.08
PACRGL-201ENST00000295290 TRIM26Q12899 539 aaPredicted RBP34.26■■■■□ 3.08
PACRGL-201ENST00000295290 ASXL2Q76L83 1435 aa34.24■■■■□ 3.07
PACRGL-201ENST00000295290 WDR7Q9Y4E6 1490 aa34.23■■■■□ 3.07
PACRGL-201ENST00000295290 ABCC10Q5T3U5 1492 aa34.17■■■■□ 3.06
PACRGL-201ENST00000295290 MYOM3Q5VTT5 1437 aa34.16■■■■□ 3.06
PACRGL-201ENST00000295290 KCNH8Q96L42 1107 aa34.16■■■■□ 3.06
PACRGL-201ENST00000295290 RRBP1Q9P2E9 1410 aaKnown RBP34.15■■■■□ 3.06
PACRGL-201ENST00000295290 MAPKBP1O60336 1514 aa34.15■■■■□ 3.06
PACRGL-201ENST00000295290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.13■■■■□ 3.05
PACRGL-201ENST00000295290 CCNB3Q8WWL7 1395 aa34.12■■■■□ 3.05
PACRGL-201ENST00000295290 TTC37Q6PGP7 1564 aa34.1■■■■□ 3.05
PACRGL-201ENST00000295290 FGD6Q6ZV73 1430 aa34.09■■■■□ 3.05
PACRGL-201ENST00000295290 GPATCH8Q9UKJ3 1502 aaKnown RBP34.08■■■■□ 3.05
PACRGL-201ENST00000295290 PCGF6Q9BYE7 350 aa34.06■■■■□ 3.04
PACRGL-201ENST00000295290 CDC42BPAQ5VT25 1732 aa34.05■■■■□ 3.04
PACRGL-201ENST00000295290 ITSN2Q9NZM3 1697 aa34.05■■■■□ 3.04
PACRGL-201ENST00000295290 MIA2Q96PC5 1412 aa34.02■■■■□ 3.04
PACRGL-201ENST00000295290 ABCA9Q8IUA7 1624 aa33.99■■■■□ 3.03
PACRGL-201ENST00000295290 PTPN23Q9H3S7 1636 aa33.98■■■■□ 3.03
PACRGL-201ENST00000295290 PREX2Q70Z35 1606 aa33.97■■■■□ 3.03
PACRGL-201ENST00000295290 MYO5CQ9NQX4 1742 aa33.96■■■■□ 3.03
PACRGL-201ENST00000295290 CFDP1Q9UEE9 299 aaPredicted RBP33.95■■■■□ 3.03
PACRGL-201ENST00000295290 CDC42BPBQ9Y5S2 1711 aa33.95■■■■□ 3.02
PACRGL-201ENST00000295290 TCOF1Q13428 1488 aaKnown RBP33.94■■■■□ 3.02
PACRGL-201ENST00000295290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.93■■■■□ 3.02
PACRGL-201ENST00000295290 FAM50AQ14320 339 aaKnown RBP33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms