RNA–Protein interactions for RNA: ENST00000293677.10

RAVER1-201, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RAVER1, Length 3,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-201ENST00000293677 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
RAVER1-201ENST00000293677 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
RAVER1-201ENST00000293677 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
RAVER1-201ENST00000293677 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
RAVER1-201ENST00000293677 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
RAVER1-201ENST00000293677 ANP32CO43423 234 aa17.44■□□□□ 0.38
RAVER1-201ENST00000293677 CFTRP13569 1480 aa17.43■□□□□ 0.38
RAVER1-201ENST00000293677 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
RAVER1-201ENST00000293677 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
RAVER1-201ENST00000293677 CUX2O14529 1486 aa17.41■□□□□ 0.38
RAVER1-201ENST00000293677 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
RAVER1-201ENST00000293677 IGF1RP08069 1367 aa17.4■□□□□ 0.38
RAVER1-201ENST00000293677 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
RAVER1-201ENST00000293677 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
RAVER1-201ENST00000293677 ANP32EQ9BTT0 268 aa17.35■□□□□ 0.37
RAVER1-201ENST00000293677 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
RAVER1-201ENST00000293677 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
RAVER1-201ENST00000293677 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
RAVER1-201ENST00000293677 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
RAVER1-201ENST00000293677 TIAM1Q13009 1591 aa17.27■□□□□ 0.36
RAVER1-201ENST00000293677 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
RAVER1-201ENST00000293677 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
RAVER1-201ENST00000293677 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
RAVER1-201ENST00000293677 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
RAVER1-201ENST00000293677 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
RAVER1-201ENST00000293677 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
RAVER1-201ENST00000293677 CHIC2Q9UKJ5 165 aa17.23■□□□□ 0.35
RAVER1-201ENST00000293677 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
RAVER1-201ENST00000293677 WDR97A6NE52 1622 aa17.19■□□□□ 0.34
RAVER1-201ENST00000293677 FHOD3Q2V2M9 1422 aa17.19■□□□□ 0.34
RAVER1-201ENST00000293677 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
RAVER1-201ENST00000293677 FHAD1B1AJZ9 1412 aa17.16■□□□□ 0.34
RAVER1-201ENST00000293677 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
RAVER1-201ENST00000293677 NBR1Q14596 966 aa17.16■□□□□ 0.34
RAVER1-201ENST00000293677 TONSLQ96HA7 1378 aa17.16■□□□□ 0.34
RAVER1-201ENST00000293677 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
RAVER1-201ENST00000293677 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
RAVER1-201ENST00000293677 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
RAVER1-201ENST00000293677 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
RAVER1-201ENST00000293677 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
RAVER1-201ENST00000293677 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
RAVER1-201ENST00000293677 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
RAVER1-201ENST00000293677 NESP48681 1621 aa17.07■□□□□ 0.32
RAVER1-201ENST00000293677 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
RAVER1-201ENST00000293677 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
RAVER1-201ENST00000293677 CFAP43Q8NDM7 1665 aa17.03■□□□□ 0.32
RAVER1-201ENST00000293677 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
RAVER1-201ENST00000293677 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
RAVER1-201ENST00000293677 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
RAVER1-201ENST00000293677 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
RAVER1-201ENST00000293677 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
RAVER1-201ENST00000293677 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
RAVER1-201ENST00000293677 ERCC6Q03468 1493 aa17■□□□□ 0.31
RAVER1-201ENST00000293677 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
RAVER1-201ENST00000293677 TOPBP1Q92547 1522 aa16.98■□□□□ 0.31
RAVER1-201ENST00000293677 PTPRKQ15262 1439 aa16.98■□□□□ 0.31
RAVER1-201ENST00000293677 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
RAVER1-201ENST00000293677 FOXD1Q16676 465 aa16.98■□□□□ 0.31
RAVER1-201ENST00000293677 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
RAVER1-201ENST00000293677 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
RAVER1-201ENST00000293677 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
RAVER1-201ENST00000293677 FBLN2P98095 1184 aa16.94■□□□□ 0.3
RAVER1-201ENST00000293677 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
RAVER1-201ENST00000293677 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
RAVER1-201ENST00000293677 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
RAVER1-201ENST00000293677 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
RAVER1-201ENST00000293677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAVER1-201ENST00000293677 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.34e-7■■■■■ 32.6
RAVER1-201ENST00000293677 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
RAVER1-201ENST00000293677 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
RAVER1-201ENST00000293677 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.29
RAVER1-201ENST00000293677 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
RAVER1-201ENST00000293677 NAIPQ13075 1403 aa16.87■□□□□ 0.29
RAVER1-201ENST00000293677 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
RAVER1-201ENST00000293677 CCDC136Q96JN2 1154 aa16.87■□□□□ 0.29
RAVER1-201ENST00000293677 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
RAVER1-201ENST00000293677 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
RAVER1-201ENST00000293677 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAVER1-201ENST00000293677 CUL7Q14999 1698 aa16.85■□□□□ 0.29
RAVER1-201ENST00000293677 PTPN23Q9H3S7 1636 aa16.84■□□□□ 0.29
RAVER1-201ENST00000293677 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
RAVER1-201ENST00000293677 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
RAVER1-201ENST00000293677 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
RAVER1-201ENST00000293677 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
RAVER1-201ENST00000293677 ANP32AP39687 249 aaKnown RBP16.8■□□□□ 0.28
RAVER1-201ENST00000293677 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
RAVER1-201ENST00000293677 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
RAVER1-201ENST00000293677 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
RAVER1-201ENST00000293677 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
RAVER1-201ENST00000293677 MSH5O43196 834 aa16.77■□□□□ 0.28
RAVER1-201ENST00000293677 CCDC184Q52MB2 194 aa16.77■□□□□ 0.27
RAVER1-201ENST00000293677 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
RAVER1-201ENST00000293677 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
RAVER1-201ENST00000293677 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
RAVER1-201ENST00000293677 DEKP35659 375 aaKnown RBP16.75■□□□□ 0.27
RAVER1-201ENST00000293677 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
RAVER1-201ENST00000293677 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
RAVER1-201ENST00000293677 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
RAVER1-201ENST00000293677 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
RAVER1-201ENST00000293677 L3MBTL2Q969R5 705 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 275.7 ms