RNA–Protein interactions for RNA: ENST00000293677.10

RAVER1-201, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RAVER1, Length 3,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-201ENST00000293677 NISCHQ9Y2I1 1504 aa24.23■■□□□ 1.47
RAVER1-201ENST00000293677 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
RAVER1-201ENST00000293677 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
RAVER1-201ENST00000293677 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
RAVER1-201ENST00000293677 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
RAVER1-201ENST00000293677 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
RAVER1-201ENST00000293677 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
RAVER1-201ENST00000293677 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
RAVER1-201ENST00000293677 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
RAVER1-201ENST00000293677 PPARGC1BQ86YN6 1023 aaKnown RBP20.23■□□□□ 0.83
RAVER1-201ENST00000293677 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
RAVER1-201ENST00000293677 HRCP23327 699 aa20.09■□□□□ 0.81
RAVER1-201ENST00000293677 LOC105371045A0A1W2PR82 267 aa19.98■□□□□ 0.79
RAVER1-201ENST00000293677 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
RAVER1-201ENST00000293677 ABCC9O60706 1549 aa19.77■□□□□ 0.76
RAVER1-201ENST00000293677 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
RAVER1-201ENST00000293677 TTBK1Q5TCY1 1321 aaPredicted RBP19.68■□□□□ 0.74
RAVER1-201ENST00000293677 TRIM26Q12899 539 aaPredicted RBP19.43■□□□□ 0.7
RAVER1-201ENST00000293677 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
RAVER1-201ENST00000293677 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
RAVER1-201ENST00000293677 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
RAVER1-201ENST00000293677 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
RAVER1-201ENST00000293677 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
RAVER1-201ENST00000293677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
RAVER1-201ENST00000293677 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
RAVER1-201ENST00000293677 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.65
RAVER1-201ENST00000293677 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
RAVER1-201ENST00000293677 RANGAP1P46060 587 aaPredicted RBP19■□□□□ 0.63
RAVER1-201ENST00000293677 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
RAVER1-201ENST00000293677 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
RAVER1-201ENST00000293677 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
RAVER1-201ENST00000293677 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.61
RAVER1-201ENST00000293677 WIZO95785 1651 aa18.82■□□□□ 0.6
RAVER1-201ENST00000293677 NACADO15069 1562 aa18.82■□□□□ 0.6
RAVER1-201ENST00000293677 CENPBP07199 599 aaPredicted RBP18.82■□□□□ 0.6
RAVER1-201ENST00000293677 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
RAVER1-201ENST00000293677 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
RAVER1-201ENST00000293677 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
RAVER1-201ENST00000293677 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
RAVER1-201ENST00000293677 HNRNPUL2Q1KMD3 747 aaKnown RBP18.67■□□□□ 0.58
RAVER1-201ENST00000293677 ACIN1Q9UKV3 1341 aaKnown RBP18.61■□□□□ 0.57
RAVER1-201ENST00000293677 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
RAVER1-201ENST00000293677 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
RAVER1-201ENST00000293677 APLP2Q06481 763 aa18.55■□□□□ 0.56
RAVER1-201ENST00000293677 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
RAVER1-201ENST00000293677 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
RAVER1-201ENST00000293677 SOGA1O94964 1423 aa18.45■□□□□ 0.54
RAVER1-201ENST00000293677 TOP2AP11388 1531 aaKnown RBP18.43■□□□□ 0.54
RAVER1-201ENST00000293677 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
RAVER1-201ENST00000293677 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
RAVER1-201ENST00000293677 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
RAVER1-201ENST00000293677 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
RAVER1-201ENST00000293677 ITGAEP38570 1179 aa18.35■□□□□ 0.53
RAVER1-201ENST00000293677 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
RAVER1-201ENST00000293677 WRNQ14191 1432 aaPredicted RBP eCLIP18.31■□□□□ 0.52
RAVER1-201ENST00000293677 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
RAVER1-201ENST00000293677 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.52
RAVER1-201ENST00000293677 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
RAVER1-201ENST00000293677 MIER1Q8N108 512 aa18.22■□□□□ 0.51
RAVER1-201ENST00000293677 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
RAVER1-201ENST00000293677 EEA1Q15075 1411 aa18.18■□□□□ 0.5
RAVER1-201ENST00000293677 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
RAVER1-201ENST00000293677 BCANQ96GW7 911 aa18.16■□□□□ 0.5
RAVER1-201ENST00000293677 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
RAVER1-201ENST00000293677 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
RAVER1-201ENST00000293677 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
RAVER1-201ENST00000293677 CLIP1P30622 1438 aa18.03■□□□□ 0.48
RAVER1-201ENST00000293677 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
RAVER1-201ENST00000293677 MYT1Q01538 1121 aa17.98■□□□□ 0.47
RAVER1-201ENST00000293677 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
RAVER1-201ENST00000293677 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
RAVER1-201ENST00000293677 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
RAVER1-201ENST00000293677 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
RAVER1-201ENST00000293677 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
RAVER1-201ENST00000293677 KIF21BO75037 1637 aa17.9■□□□□ 0.46
RAVER1-201ENST00000293677 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
RAVER1-201ENST00000293677 HIRIP3Q9BW71 556 aaPredicted RBP17.82■□□□□ 0.44
RAVER1-201ENST00000293677 NEFLP07196 543 aa17.81■□□□□ 0.44
RAVER1-201ENST00000293677 KANK4Q5T7N3 995 aaPredicted RBP17.76■□□□□ 0.43
RAVER1-201ENST00000293677 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
RAVER1-201ENST00000293677 TOP2BQ02880 1626 aa17.71■□□□□ 0.43
RAVER1-201ENST00000293677 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
RAVER1-201ENST00000293677 FKBP8Q14318 412 aa17.7■□□□□ 0.42
RAVER1-201ENST00000293677 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
RAVER1-201ENST00000293677 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
RAVER1-201ENST00000293677 TRIM52Q96A61 297 aa17.68■□□□□ 0.42
RAVER1-201ENST00000293677 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
RAVER1-201ENST00000293677 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
RAVER1-201ENST00000293677 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
RAVER1-201ENST00000293677 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
RAVER1-201ENST00000293677 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
RAVER1-201ENST00000293677 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
RAVER1-201ENST00000293677 CUX1P39880 1505 aa17.58■□□□□ 0.4
RAVER1-201ENST00000293677 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
RAVER1-201ENST00000293677 IRX6P78412 446 aaPredicted RBP17.57■□□□□ 0.4
RAVER1-201ENST00000293677 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
RAVER1-201ENST00000293677 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
RAVER1-201ENST00000293677 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
RAVER1-201ENST00000293677 CCNB3Q8WWL7 1395 aa17.5■□□□□ 0.39
RAVER1-201ENST00000293677 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms