RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 JPH4Q96JJ6 628 aa30.16■■■□□ 2.42
TFF3-201ENST00000291525 IGF1RP08069 1367 aa30.14■■■□□ 2.41
TFF3-201ENST00000291525 KIAA0586Q9BVV6 1533 aa30.05■■■□□ 2.4
TFF3-201ENST00000291525 CARMIL1Q5VZK9 1371 aa29.98■■■□□ 2.39
TFF3-201ENST00000291525 NPM1P06748 294 aaKnown RBP eCLIP29.88■■■□□ 2.37
TFF3-201ENST00000291525 KIF13AQ9H1H9 1805 aa29.85■■■□□ 2.37
TFF3-201ENST00000291525 ADCY10Q96PN6 1610 aa29.82■■■□□ 2.36
TFF3-201ENST00000291525 IQGAP2Q13576 1575 aa29.81■■■□□ 2.36
TFF3-201ENST00000291525 MAPKBP1O60336 1514 aa29.8■■■□□ 2.36
TFF3-201ENST00000291525 CARMIL2Q6F5E8 1435 aa29.79■■■□□ 2.36
TFF3-201ENST00000291525 RAPGEF2Q9Y4G8 1499 aa29.75■■■□□ 2.35
TFF3-201ENST00000291525 PTPRGP23470 1445 aa29.74■■■□□ 2.35
TFF3-201ENST00000291525 ABCC10Q5T3U5 1492 aa29.73■■■□□ 2.35
TFF3-201ENST00000291525 TNIKQ9UKE5 1360 aa29.72■■■□□ 2.35
TFF3-201ENST00000291525 FAM69CQ0P6D2 419 aa29.67■■■□□ 2.34
TFF3-201ENST00000291525 DIP2BQ9P265 1576 aa29.67■■■□□ 2.34
TFF3-201ENST00000291525 TTBK1Q5TCY1 1321 aaPredicted RBP29.63■■■□□ 2.33
TFF3-201ENST00000291525 UGGT2Q9NYU1 1516 aa29.61■■■□□ 2.33
TFF3-201ENST00000291525 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
TFF3-201ENST00000291525 ABCC2Q92887 1545 aa29.58■■■□□ 2.33
TFF3-201ENST00000291525 CTTNBP2Q8WZ74 1663 aa29.55■■■□□ 2.32
TFF3-201ENST00000291525 UHRF1BP1LA0JNW5 1464 aa29.55■■■□□ 2.32
TFF3-201ENST00000291525 AEBP2Q6ZN18 517 aaPredicted RBP29.54■■■□□ 2.32
TFF3-201ENST00000291525 UACAQ9BZF9 1416 aa29.53■■■□□ 2.32
TFF3-201ENST00000291525 KIAA0556O60303 1618 aa29.53■■■□□ 2.32
TFF3-201ENST00000291525 PLB1Q6P1J6 1458 aa29.48■■■□□ 2.31
TFF3-201ENST00000291525 TSPOAP1O95153 1857 aa29.47■■■□□ 2.31
TFF3-201ENST00000291525 ASXL2Q76L83 1435 aa29.45■■■□□ 2.3
TFF3-201ENST00000291525 PRXQ9BXM0 1461 aa29.44■■■□□ 2.3
TFF3-201ENST00000291525 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
TFF3-201ENST00000291525 KDM6BO15054 1643 aa29.41■■■□□ 2.3
TFF3-201ENST00000291525 KDM5BQ9UGL1 1544 aa29.4■■■□□ 2.3
TFF3-201ENST00000291525 GLI2P10070 1586 aa29.39■■■□□ 2.29
TFF3-201ENST00000291525 ZCCHC11Q5TAX3 1644 aaKnown RBP29.35■■■□□ 2.29
TFF3-201ENST00000291525 EPRSP07814 1512 aaKnown RBP29.27■■■□□ 2.28
TFF3-201ENST00000291525 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
TFF3-201ENST00000291525 CSRNP3Q8WYN3 585 aa29.24■■■□□ 2.27
TFF3-201ENST00000291525 EEA1Q15075 1411 aa29.23■■■□□ 2.27
TFF3-201ENST00000291525 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
TFF3-201ENST00000291525 ABCA8O94911 1581 aa29.22■■■□□ 2.27
TFF3-201ENST00000291525 MAP3K4Q9Y6R4 1608 aa29.22■■■□□ 2.27
TFF3-201ENST00000291525 WDR7Q9Y4E6 1490 aa29.21■■■□□ 2.27
TFF3-201ENST00000291525 TEX14Q8IWB6 1497 aa29.18■■■□□ 2.26
TFF3-201ENST00000291525 SAMD9Q5K651 1589 aa29.09■■■□□ 2.25
TFF3-201ENST00000291525 CFAP43Q8NDM7 1665 aa29.07■■■□□ 2.24
TFF3-201ENST00000291525 P3H3Q8IVL6 736 aa29.05■■■□□ 2.24
TFF3-201ENST00000291525 KCNH8Q96L42 1107 aa29■■■□□ 2.23
TFF3-201ENST00000291525 CD109Q6YHK3 1445 aa29■■■□□ 2.23
TFF3-201ENST00000291525 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
TFF3-201ENST00000291525 RAPGEF6Q8TEU7 1601 aa28.98■■■□□ 2.23
TFF3-201ENST00000291525 KIF21BO75037 1637 aa28.97■■■□□ 2.23
TFF3-201ENST00000291525 COL17A1Q9UMD9 1497 aaPredicted RBP28.97■■■□□ 2.23
TFF3-201ENST00000291525 ATP10BO94823 1461 aa28.95■■■□□ 2.22
TFF3-201ENST00000291525 KDM4FA0A1W2PPD8 638 aa28.94■■■□□ 2.22
TFF3-201ENST00000291525 ARID3CA6NKF2 412 aa28.91■■■□□ 2.22
TFF3-201ENST00000291525 RANGAP1P46060 587 aaPredicted RBP28.88■■■□□ 2.21
TFF3-201ENST00000291525 EFCAB5A4FU69 1503 aa28.87■■■□□ 2.21
TFF3-201ENST00000291525 FHOD3Q2V2M9 1422 aa28.86■■■□□ 2.21
TFF3-201ENST00000291525 ABCA9Q8IUA7 1624 aa28.83■■■□□ 2.21
TFF3-201ENST00000291525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.83■■■□□ 2.21
TFF3-201ENST00000291525 HNRNPUL2Q1KMD3 747 aaKnown RBP28.83■■■□□ 2.21
TFF3-201ENST00000291525 ADGRL1O94910 1474 aa28.82■■■□□ 2.2
TFF3-201ENST00000291525 NUP153P49790 1475 aaKnown RBP28.81■■■□□ 2.2
TFF3-201ENST00000291525 PHLDB1Q86UU1 1377 aa28.76■■■□□ 2.2
TFF3-201ENST00000291525 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
TFF3-201ENST00000291525 ARAP3Q8WWN8 1544 aa28.75■■■□□ 2.19
TFF3-201ENST00000291525 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.18
TFF3-201ENST00000291525 NEO1Q92859 1461 aa28.68■■■□□ 2.18
TFF3-201ENST00000291525 PLEKHD1A6NEE1 506 aa28.68■■■□□ 2.18
TFF3-201ENST00000291525 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
TFF3-201ENST00000291525 FMN1Q68DA7 1419 aa28.6■■■□□ 2.17
TFF3-201ENST00000291525 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
TFF3-201ENST00000291525 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
TFF3-201ENST00000291525 CDK13Q14004 1512 aaKnown RBP28.54■■■□□ 2.16
TFF3-201ENST00000291525 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
TFF3-201ENST00000291525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.53■■■□□ 2.16
TFF3-201ENST00000291525 RAPGEF3O95398 923 aa28.51■■■□□ 2.15
TFF3-201ENST00000291525 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
TFF3-201ENST00000291525 TTC37Q6PGP7 1564 aa28.5■■■□□ 2.15
TFF3-201ENST00000291525 FANCAO15360 1455 aa28.49■■■□□ 2.15
TFF3-201ENST00000291525 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
TFF3-201ENST00000291525 AKNAQ7Z591 1439 aa28.47■■■□□ 2.15
TFF3-201ENST00000291525 DENND4BO75064 1496 aaPredicted RBP28.46■■■□□ 2.15
TFF3-201ENST00000291525 CDK11AQ9UQ88 783 aaPredicted RBP28.45■■■□□ 2.14
TFF3-201ENST00000291525 RICTORQ6R327 1708 aa28.43■■■□□ 2.14
TFF3-201ENST00000291525 ARHGEF40Q8TER5 1519 aa28.4■■■□□ 2.14
TFF3-201ENST00000291525 HECW2Q9P2P5 1572 aa28.39■■■□□ 2.14
TFF3-201ENST00000291525 MYO5CQ9NQX4 1742 aa28.37■■■□□ 2.13
TFF3-201ENST00000291525 KIF14Q15058 1648 aa28.36■■■□□ 2.13
TFF3-201ENST00000291525 PLCH2O75038 1416 aa28.36■■■□□ 2.13
TFF3-201ENST00000291525 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
TFF3-201ENST00000291525 ZMYM4Q5VZL5 1548 aa28.35■■■□□ 2.13
TFF3-201ENST00000291525 CLIP1P30622 1438 aa28.35■■■□□ 2.13
TFF3-201ENST00000291525 ARID4BQ4LE39 1312 aaPredicted RBP28.34■■■□□ 2.13
TFF3-201ENST00000291525 BCORL1Q5H9F3 1711 aa28.34■■■□□ 2.13
TFF3-201ENST00000291525 TROQ12816 1431 aaPredicted RBP28.33■■■□□ 2.13
TFF3-201ENST00000291525 LRRIQ1Q96JM4 1722 aa28.29■■■□□ 2.12
TFF3-201ENST00000291525 ZFYVE16Q7Z3T8 1539 aa28.29■■■□□ 2.12
TFF3-201ENST00000291525 MAGI2Q86UL8 1455 aa28.29■■■□□ 2.12
TFF3-201ENST00000291525 CCDC18Q5T9S5 1454 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms