RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CSRNP3Q8WYN3 585 aa44.96■■■■■ 4.79
SSU72-201ENST00000291386 SHROOM2Q13796 1616 aa44.89■■■■■ 4.78
SSU72-201ENST00000291386 KIAA0586Q9BVV6 1533 aa44.88■■■■■ 4.78
SSU72-201ENST00000291386 JPH4Q96JJ6 628 aa44.74■■■■■ 4.75
SSU72-201ENST00000291386 FAM9AQ8IZU1 332 aaPredicted RBP44.73■■■■■ 4.75
SSU72-201ENST00000291386 ARAP1Q96P48 1450 aa44.65■■■■■ 4.74
SSU72-201ENST00000291386 IQGAP2Q13576 1575 aa44.65■■■■■ 4.74
SSU72-201ENST00000291386 ERCC6L2Q5T890 1561 aa44.62■■■■■ 4.73
SSU72-201ENST00000291386 PRG4Q92954 1404 aaPredicted RBP44.62■■■■■ 4.73
SSU72-201ENST00000291386 KIF21BO75037 1637 aa44.61■■■■■ 4.73
SSU72-201ENST00000291386 CTTNBP2Q8WZ74 1663 aa44.6■■■■■ 4.73
SSU72-201ENST00000291386 CYB5RLQ6IPT4 315 aa44.49■■■■■ 4.71
SSU72-201ENST00000291386 UGGT2Q9NYU1 1516 aa44.45■■■■■ 4.71
SSU72-201ENST00000291386 CARMIL2Q6F5E8 1435 aa44.36■■■■■ 4.69
SSU72-201ENST00000291386 DISP1Q96F81 1524 aa44.33■■■■■ 4.69
SSU72-201ENST00000291386 GOLGA3Q08378 1498 aa44.33■■■■■ 4.69
SSU72-201ENST00000291386 KIAA0556O60303 1618 aa44.23■■■■■ 4.67
SSU72-201ENST00000291386 TNIKQ9UKE5 1360 aa44.2■■■■■ 4.67
SSU72-201ENST00000291386 PTPRGP23470 1445 aa44.13■■■■■ 4.65
SSU72-201ENST00000291386 UBTFP17480 764 aaKnown RBP44.11■■■■■ 4.65
SSU72-201ENST00000291386 SAMD9Q5K651 1589 aa44.06■■■■■ 4.64
SSU72-201ENST00000291386 EHMT2Q96KQ7 1210 aa44.04■■■■■ 4.64
SSU72-201ENST00000291386 ADCY10Q96PN6 1610 aa43.93■■■■■ 4.62
SSU72-201ENST00000291386 EFCAB5A4FU69 1503 aa43.92■■■■■ 4.62
SSU72-201ENST00000291386 TTBK1Q5TCY1 1321 aaPredicted RBP43.89■■■■■ 4.62
SSU72-201ENST00000291386 UACAQ9BZF9 1416 aa43.87■■■■■ 4.61
SSU72-201ENST00000291386 UHRF1BP1LA0JNW5 1464 aa43.87■■■■■ 4.61
SSU72-201ENST00000291386 RANGAP1P46060 587 aaPredicted RBP43.82■■■■■ 4.61
SSU72-201ENST00000291386 P3H3Q8IVL6 736 aa43.82■■■■■ 4.61
SSU72-201ENST00000291386 ABCC2Q92887 1545 aa43.8■■■■■ 4.6
SSU72-201ENST00000291386 ABCA8O94911 1581 aa43.75■■■■■ 4.59
SSU72-201ENST00000291386 FHOD3Q2V2M9 1422 aa43.73■■■■■ 4.59
SSU72-201ENST00000291386 PLB1Q6P1J6 1458 aa43.71■■■■■ 4.59
SSU72-201ENST00000291386 NPM1P06748 294 aaKnown RBP eCLIP43.71■■■■■ 4.59
SSU72-201ENST00000291386 ARHGAP35Q9NRY4 1499 aa43.7■■■■■ 4.59
SSU72-201ENST00000291386 MAPKBP1O60336 1514 aa43.64■■■■■ 4.58
SSU72-201ENST00000291386 KDM5BQ9UGL1 1544 aa43.63■■■■■ 4.58
SSU72-201ENST00000291386 RAPGEF6Q8TEU7 1601 aa43.55■■■■■ 4.56
SSU72-201ENST00000291386 LOC105371045A0A1W2PR82 267 aa43.53■■■■■ 4.56
SSU72-201ENST00000291386 ZCCHC11Q5TAX3 1644 aaKnown RBP43.51■■■■■ 4.56
SSU72-201ENST00000291386 CLIP1P30622 1438 aa43.51■■■■■ 4.56
SSU72-201ENST00000291386 FMN1Q68DA7 1419 aa43.48■■■■■ 4.55
SSU72-201ENST00000291386 TRHP20396 242 aaPredicted RBP43.45■■■■■ 4.55
SSU72-201ENST00000291386 ASXL2Q76L83 1435 aa43.39■■■■■ 4.54
SSU72-201ENST00000291386 CEP162Q5TB80 1403 aa43.39■■■■■ 4.54
SSU72-201ENST00000291386 NUP153P49790 1475 aaKnown RBP43.38■■■■■ 4.54
SSU72-201ENST00000291386 ABCC10Q5T3U5 1492 aa43.38■■■■■ 4.53
SSU72-201ENST00000291386 ATP10BO94823 1461 aa43.36■■■■■ 4.53
SSU72-201ENST00000291386 KIF13AQ9H1H9 1805 aa43.34■■■■■ 4.53
SSU72-201ENST00000291386 DIP2BQ9P265 1576 aa43.31■■■■■ 4.52
SSU72-201ENST00000291386 HECW1Q76N89 1606 aa43.24■■■■■ 4.51
SSU72-201ENST00000291386 WDR7Q9Y4E6 1490 aa43.24■■■■■ 4.51
SSU72-201ENST00000291386 FAM69CQ0P6D2 419 aa43.2■■■■■ 4.51
SSU72-201ENST00000291386 ARID3CA6NKF2 412 aa43.19■■■■■ 4.5
SSU72-201ENST00000291386 GLI2P10070 1586 aa43.18■■■■■ 4.5
SSU72-201ENST00000291386 CASKIN1Q8WXD9 1431 aa43.18■■■■■ 4.5
SSU72-201ENST00000291386 EPRSP07814 1512 aaKnown RBP43.17■■■■■ 4.5
SSU72-201ENST00000291386 PCF11O94913 1555 aaKnown RBP43.14■■■■■ 4.5
SSU72-201ENST00000291386 FYCO1Q9BQS8 1478 aa43.09■■■■■ 4.49
SSU72-201ENST00000291386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.09■■■■■ 4.49
SSU72-201ENST00000291386 HNRNPUL2Q1KMD3 747 aaKnown RBP43.09■■■■■ 4.49
SSU72-201ENST00000291386 CDK13Q14004 1512 aaKnown RBP43.07■■■■■ 4.48
SSU72-201ENST00000291386 ATP1B4Q9UN42 357 aaPredicted RBP43.05■■■■■ 4.48
SSU72-201ENST00000291386 LRRIQ1Q96JM4 1722 aa43.05■■■■■ 4.48
SSU72-201ENST00000291386 PLEKHD1A6NEE1 506 aa42.99■■■■■ 4.47
SSU72-201ENST00000291386 CCDC18Q5T9S5 1454 aa42.98■■■■■ 4.47
SSU72-201ENST00000291386 MAP3K4Q9Y6R4 1608 aa42.97■■■■■ 4.47
SSU72-201ENST00000291386 KCNH8Q96L42 1107 aa42.96■■■■■ 4.47
SSU72-201ENST00000291386 CFAP43Q8NDM7 1665 aa42.91■■■■■ 4.46
SSU72-201ENST00000291386 CDK11AQ9UQ88 783 aaPredicted RBP42.9■■■■■ 4.46
SSU72-201ENST00000291386 VPS8Q8N3P4 1428 aa42.88■■■■■ 4.46
SSU72-201ENST00000291386 TSPOAP1O95153 1857 aa42.87■■■■■ 4.45
SSU72-201ENST00000291386 ABCA9Q8IUA7 1624 aa42.86■■■■■ 4.45
SSU72-201ENST00000291386 PPRC1Q5VV67 1664 aaKnown RBP42.85■■■■■ 4.45
SSU72-201ENST00000291386 CD109Q6YHK3 1445 aa42.8■■■■■ 4.44
SSU72-201ENST00000291386 TROQ12816 1431 aaPredicted RBP42.78■■■■■ 4.44
SSU72-201ENST00000291386 MAGI3Q5TCQ9 1506 aa42.76■■■■■ 4.44
SSU72-201ENST00000291386 TEX14Q8IWB6 1497 aa42.73■■■■■ 4.43
SSU72-201ENST00000291386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.71■■■■■ 4.432e-6■■■□□ 18.7
SSU72-201ENST00000291386 KIF14Q15058 1648 aa42.64■■■■■ 4.42
SSU72-201ENST00000291386 TTC37Q6PGP7 1564 aa42.63■■■■■ 4.41
SSU72-201ENST00000291386 TIAM1Q13009 1591 aa42.56■■■■■ 4.4
SSU72-201ENST00000291386 MAP3K1Q13233 1512 aa42.55■■■■■ 4.4
SSU72-201ENST00000291386 KDM6BO15054 1643 aa42.51■■■■■ 4.4
SSU72-201ENST00000291386 MTUS2Q5JR59 1369 aa42.5■■■■■ 4.39
SSU72-201ENST00000291386 EHBP1L1Q8N3D4 1523 aa42.49■■■■■ 4.39
SSU72-201ENST00000291386 PHLDB1Q86UU1 1377 aa42.49■■■■■ 4.39
SSU72-201ENST00000291386 PLCH2O75038 1416 aa42.48■■■■■ 4.39
SSU72-201ENST00000291386 NEO1Q92859 1461 aa42.48■■■■■ 4.39
SSU72-201ENST00000291386 MYO5CQ9NQX4 1742 aa42.47■■■■■ 4.39
SSU72-201ENST00000291386 ARAP3Q8WWN8 1544 aa42.46■■■■■ 4.39
SSU72-201ENST00000291386 CFAP74Q9C0B2 1584 aa42.4■■■■■ 4.38
SSU72-201ENST00000291386 COL17A1Q9UMD9 1497 aaPredicted RBP42.39■■■■■ 4.38
SSU72-201ENST00000291386 FANCAO15360 1455 aa42.38■■■■■ 4.38
SSU72-201ENST00000291386 LRRC9Q6ZRR7 1453 aa42.36■■■■■ 4.37
SSU72-201ENST00000291386 PREX2Q70Z35 1606 aa42.32■■■■■ 4.37
SSU72-201ENST00000291386 CDC42BPBQ9Y5S2 1711 aa42.32■■■■■ 4.36
SSU72-201ENST00000291386 CDC42BPAQ5VT25 1732 aa42.31■■■■■ 4.36
SSU72-201ENST00000291386 AKNAQ7Z591 1439 aa42.3■■■■■ 4.36
SSU72-201ENST00000291386 APLP2Q06481 763 aa42.3■■■■■ 4.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms