RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
SLC13A3-202ENST00000290317 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
SLC13A3-202ENST00000290317 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
SLC13A3-202ENST00000290317 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
SLC13A3-202ENST00000290317 WDR62O43379 1518 aa11.51□□□□□ -0.57
SLC13A3-202ENST00000290317 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
SLC13A3-202ENST00000290317 CUL7Q14999 1698 aa11.46□□□□□ -0.57
SLC13A3-202ENST00000290317 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.58
SLC13A3-202ENST00000290317 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
SLC13A3-202ENST00000290317 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
SLC13A3-202ENST00000290317 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
SLC13A3-202ENST00000290317 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
SLC13A3-202ENST00000290317 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
SLC13A3-202ENST00000290317 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
SLC13A3-202ENST00000290317 NEUROD1Q13562 356 aa11.42□□□□□ -0.58
SLC13A3-202ENST00000290317 CARMIL2Q6F5E8 1435 aa11.41□□□□□ -0.58
SLC13A3-202ENST00000290317 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
SLC13A3-202ENST00000290317 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
SLC13A3-202ENST00000290317 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
SLC13A3-202ENST00000290317 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
SLC13A3-202ENST00000290317 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
SLC13A3-202ENST00000290317 ITGAEP38570 1179 aa11.39□□□□□ -0.59
SLC13A3-202ENST00000290317 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
SLC13A3-202ENST00000290317 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
SLC13A3-202ENST00000290317 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
SLC13A3-202ENST00000290317 MTUS2Q5JR59 1369 aa11.38□□□□□ -0.59
SLC13A3-202ENST00000290317 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
SLC13A3-202ENST00000290317 FAM50AQ14320 339 aaKnown RBP11.37□□□□□ -0.59
SLC13A3-202ENST00000290317 THOC2Q8NI27 1593 aaKnown RBP11.37□□□□□ -0.59
SLC13A3-202ENST00000290317 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
SLC13A3-202ENST00000290317 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
SLC13A3-202ENST00000290317 GRIN2AQ12879 1464 aa11.35□□□□□ -0.59
SLC13A3-202ENST00000290317 EFCAB5A4FU69 1503 aa11.34□□□□□ -0.59
SLC13A3-202ENST00000290317 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
SLC13A3-202ENST00000290317 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
SLC13A3-202ENST00000290317 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
SLC13A3-202ENST00000290317 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
SLC13A3-202ENST00000290317 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
SLC13A3-202ENST00000290317 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
SLC13A3-202ENST00000290317 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
SLC13A3-202ENST00000290317 IQGAP2Q13576 1575 aa11.3□□□□□ -0.6
SLC13A3-202ENST00000290317 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
SLC13A3-202ENST00000290317 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.61
SLC13A3-202ENST00000290317 PTPRGP23470 1445 aa11.26□□□□□ -0.61
SLC13A3-202ENST00000290317 PRG4Q92954 1404 aaPredicted RBP11.24□□□□□ -0.61
SLC13A3-202ENST00000290317 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
SLC13A3-202ENST00000290317 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
SLC13A3-202ENST00000290317 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
SLC13A3-202ENST00000290317 CCNB3Q8WWL7 1395 aa11.21□□□□□ -0.61
SLC13A3-202ENST00000290317 NUP160Q12769 1436 aa11.21□□□□□ -0.62
SLC13A3-202ENST00000290317 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
SLC13A3-202ENST00000290317 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
SLC13A3-202ENST00000290317 KCNH8Q96L42 1107 aa11.19□□□□□ -0.62
SLC13A3-202ENST00000290317 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
SLC13A3-202ENST00000290317 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
SLC13A3-202ENST00000290317 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
SLC13A3-202ENST00000290317 ANP32EQ9BTT0 268 aa11.17□□□□□ -0.62
SLC13A3-202ENST00000290317 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
SLC13A3-202ENST00000290317 TIAM1Q13009 1591 aa11.14□□□□□ -0.63
SLC13A3-202ENST00000290317 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
SLC13A3-202ENST00000290317 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
SLC13A3-202ENST00000290317 TSPY4P0CV99 314 aa11.13□□□□□ -0.63
SLC13A3-202ENST00000290317 TSPY10P0CW01 314 aa11.13□□□□□ -0.63
SLC13A3-202ENST00000290317 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
SLC13A3-202ENST00000290317 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
SLC13A3-202ENST00000290317 CHIC2Q9UKJ5 165 aa11.12□□□□□ -0.63
SLC13A3-202ENST00000290317 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
SLC13A3-202ENST00000290317 EPRSP07814 1512 aaKnown RBP11.11□□□□□ -0.63
SLC13A3-202ENST00000290317 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
SLC13A3-202ENST00000290317 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
SLC13A3-202ENST00000290317 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
SLC13A3-202ENST00000290317 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
SLC13A3-202ENST00000290317 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
SLC13A3-202ENST00000290317 EHBP1L1Q8N3D4 1523 aa11.07□□□□□ -0.64
SLC13A3-202ENST00000290317 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
SLC13A3-202ENST00000290317 MYOM3Q5VTT5 1437 aa11.06□□□□□ -0.64
SLC13A3-202ENST00000290317 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
SLC13A3-202ENST00000290317 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
SLC13A3-202ENST00000290317 TROQ12816 1431 aaPredicted RBP11.05□□□□□ -0.64
SLC13A3-202ENST00000290317 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
SLC13A3-202ENST00000290317 CDK13Q14004 1512 aaKnown RBP11.05□□□□□ -0.64
SLC13A3-202ENST00000290317 FGD6Q6ZV73 1430 aa11.05□□□□□ -0.64
SLC13A3-202ENST00000290317 CHD1O14646 1710 aa11.04□□□□□ -0.64
SLC13A3-202ENST00000290317 EFCAB2Q5VUJ9 269 aa11.04□□□□□ -0.64
SLC13A3-202ENST00000290317 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
SLC13A3-202ENST00000290317 YTHDC1Q96MU7 727 aaKnown RBP11.03□□□□□ -0.64
SLC13A3-202ENST00000290317 RSPH4AQ5TD94 716 aa11.02□□□□□ -0.64
SLC13A3-202ENST00000290317 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.65
SLC13A3-202ENST00000290317 SETD5Q9C0A6 1442 aa11.02□□□□□ -0.65
SLC13A3-202ENST00000290317 SUPT6HQ7KZ85 1726 aaKnown RBP11.01□□□□□ -0.65
SLC13A3-202ENST00000290317 MIA2Q96PC5 1412 aa11□□□□□ -0.65
SLC13A3-202ENST00000290317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11□□□□□ -0.65
SLC13A3-202ENST00000290317 ATP10BO94823 1461 aa10.99□□□□□ -0.65
SLC13A3-202ENST00000290317 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
SLC13A3-202ENST00000290317 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
SLC13A3-202ENST00000290317 CFAP43Q8NDM7 1665 aa10.97□□□□□ -0.65
SLC13A3-202ENST00000290317 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.653e-6■■■■□ 21.2
SLC13A3-202ENST00000290317 RAB3GAP2Q9H2M9 1393 aa10.97□□□□□ -0.65
SLC13A3-202ENST00000290317 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.66
SLC13A3-202ENST00000290317 ANKRD30AQ9BXX3 1397 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms