RNA–Protein interactions for RNA: ENST00000289175.10

LRRFIP1-202, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-202ENST00000289175 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
LRRFIP1-202ENST00000289175 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
LRRFIP1-202ENST00000289175 TOP2BQ02880 1626 aa21.28■■□□□ 1
LRRFIP1-202ENST00000289175 DNMBPQ6XZF7 1577 aa21.26■□□□□ 0.99
LRRFIP1-202ENST00000289175 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
LRRFIP1-202ENST00000289175 EEA1Q15075 1411 aa21.23■□□□□ 0.99
LRRFIP1-202ENST00000289175 IFT140Q96RY7 1462 aa21.16■□□□□ 0.98
LRRFIP1-202ENST00000289175 MTUS2Q5JR59 1369 aa21.16■□□□□ 0.98
LRRFIP1-202ENST00000289175 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
LRRFIP1-202ENST00000289175 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
LRRFIP1-202ENST00000289175 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
LRRFIP1-202ENST00000289175 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
LRRFIP1-202ENST00000289175 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
LRRFIP1-202ENST00000289175 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
LRRFIP1-202ENST00000289175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.962e-7■■□□□ 12.8
LRRFIP1-202ENST00000289175 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
LRRFIP1-202ENST00000289175 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
LRRFIP1-202ENST00000289175 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.95
LRRFIP1-202ENST00000289175 CNGB1Q14028 1251 aaPredicted RBP21■□□□□ 0.95
LRRFIP1-202ENST00000289175 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
LRRFIP1-202ENST00000289175 PTPRGP23470 1445 aa20.98■□□□□ 0.95
LRRFIP1-202ENST00000289175 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.95
LRRFIP1-202ENST00000289175 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
LRRFIP1-202ENST00000289175 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
LRRFIP1-202ENST00000289175 MLECQ14165 292 aa20.93■□□□□ 0.94
LRRFIP1-202ENST00000289175 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
LRRFIP1-202ENST00000289175 ZNF326Q5BKZ1 582 aaKnown RBP20.89■□□□□ 0.93
LRRFIP1-202ENST00000289175 BIVM-ERCC5R4GMW8 1640 aa20.88■□□□□ 0.93
LRRFIP1-202ENST00000289175 HNRNPMP52272 730 aaKnown RBP eCLIP20.88■□□□□ 0.935e-6■■■■□ 20.7
LRRFIP1-202ENST00000289175 WDR62O43379 1518 aa20.88■□□□□ 0.93
LRRFIP1-202ENST00000289175 ARHGAP35Q9NRY4 1499 aa20.86■□□□□ 0.93
LRRFIP1-202ENST00000289175 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
LRRFIP1-202ENST00000289175 GRIN2AQ12879 1464 aa20.86■□□□□ 0.93
LRRFIP1-202ENST00000289175 VPS8Q8N3P4 1428 aa20.86■□□□□ 0.93
LRRFIP1-202ENST00000289175 FAM69CQ0P6D2 419 aa20.83■□□□□ 0.92
LRRFIP1-202ENST00000289175 PLB1Q6P1J6 1458 aa20.82■□□□□ 0.92
LRRFIP1-202ENST00000289175 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
LRRFIP1-202ENST00000289175 FOXD1Q16676 465 aa20.8■□□□□ 0.92
LRRFIP1-202ENST00000289175 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
LRRFIP1-202ENST00000289175 THOC2Q8NI27 1593 aaKnown RBP20.78■□□□□ 0.92
LRRFIP1-202ENST00000289175 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
LRRFIP1-202ENST00000289175 KIF21BO75037 1637 aa20.77■□□□□ 0.92
LRRFIP1-202ENST00000289175 ARID4BQ4LE39 1312 aaPredicted RBP20.76■□□□□ 0.91
LRRFIP1-202ENST00000289175 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
LRRFIP1-202ENST00000289175 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
LRRFIP1-202ENST00000289175 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
LRRFIP1-202ENST00000289175 TARBP1Q13395 1621 aaKnown RBP20.73■□□□□ 0.91
LRRFIP1-202ENST00000289175 CCNB3Q8WWL7 1395 aa20.7■□□□□ 0.9
LRRFIP1-202ENST00000289175 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
LRRFIP1-202ENST00000289175 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
LRRFIP1-202ENST00000289175 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
LRRFIP1-202ENST00000289175 AFAP1Q8N556 730 aa20.67■□□□□ 0.9
LRRFIP1-202ENST00000289175 MAGI1Q96QZ7 1491 aaPredicted RBP20.67■□□□□ 0.9
LRRFIP1-202ENST00000289175 GGT6Q6P531 493 aa20.66■□□□□ 0.9
LRRFIP1-202ENST00000289175 KIAA0586Q9BVV6 1533 aa20.66■□□□□ 0.9
LRRFIP1-202ENST00000289175 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
LRRFIP1-202ENST00000289175 RAPGEF3O95398 923 aa20.64■□□□□ 0.9
LRRFIP1-202ENST00000289175 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
LRRFIP1-202ENST00000289175 PHLDB1Q86UU1 1377 aa20.6■□□□□ 0.89
LRRFIP1-202ENST00000289175 RGL3Q3MIN7 710 aa20.6■□□□□ 0.89
LRRFIP1-202ENST00000289175 KDM2AQ9Y2K7 1162 aa20.58■□□□□ 0.89
LRRFIP1-202ENST00000289175 IQGAP2Q13576 1575 aa20.58■□□□□ 0.89
LRRFIP1-202ENST00000289175 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
LRRFIP1-202ENST00000289175 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
LRRFIP1-202ENST00000289175 ADAMTS12P58397 1594 aa20.54■□□□□ 0.88
LRRFIP1-202ENST00000289175 BCANQ96GW7 911 aa20.54■□□□□ 0.88
LRRFIP1-202ENST00000289175 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.87
LRRFIP1-202ENST00000289175 CEP170Q5SW79 1584 aa20.52■□□□□ 0.87
LRRFIP1-202ENST00000289175 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
LRRFIP1-202ENST00000289175 EFCAB2Q5VUJ9 269 aa20.5■□□□□ 0.87
LRRFIP1-202ENST00000289175 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
LRRFIP1-202ENST00000289175 NUTM2DQ5VT03 806 aaPredicted RBP20.49■□□□□ 0.87
LRRFIP1-202ENST00000289175 HRCP23327 699 aa20.48■□□□□ 0.87
LRRFIP1-202ENST00000289175 KIF3BO15066 747 aa20.45■□□□□ 0.87
LRRFIP1-202ENST00000289175 UACAQ9BZF9 1416 aa20.44■□□□□ 0.86
LRRFIP1-202ENST00000289175 CUL7Q14999 1698 aa20.44■□□□□ 0.86
LRRFIP1-202ENST00000289175 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
LRRFIP1-202ENST00000289175 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
LRRFIP1-202ENST00000289175 CHD1O14646 1710 aa20.4■□□□□ 0.86
LRRFIP1-202ENST00000289175 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
LRRFIP1-202ENST00000289175 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.86
LRRFIP1-202ENST00000289175 NUP160Q12769 1436 aa20.39■□□□□ 0.85
LRRFIP1-202ENST00000289175 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
LRRFIP1-202ENST00000289175 PLEKHG5O94827 1062 aa20.39■□□□□ 0.85
LRRFIP1-202ENST00000289175 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
LRRFIP1-202ENST00000289175 LRRC9Q6ZRR7 1453 aa20.36■□□□□ 0.85
LRRFIP1-202ENST00000289175 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
LRRFIP1-202ENST00000289175 NCOA2Q15596 1464 aa20.34■□□□□ 0.85
LRRFIP1-202ENST00000289175 ATP10BO94823 1461 aa20.32■□□□□ 0.84
LRRFIP1-202ENST00000289175 CCDC18Q5T9S5 1454 aa20.31■□□□□ 0.84
LRRFIP1-202ENST00000289175 NUP153P49790 1475 aaKnown RBP20.3■□□□□ 0.84
LRRFIP1-202ENST00000289175 PKD2Q13563 968 aa20.28■□□□□ 0.84
LRRFIP1-202ENST00000289175 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
LRRFIP1-202ENST00000289175 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.83
LRRFIP1-202ENST00000289175 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
LRRFIP1-202ENST00000289175 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
LRRFIP1-202ENST00000289175 ASXL2Q76L83 1435 aa20.23■□□□□ 0.83
LRRFIP1-202ENST00000289175 NUP155O75694 1391 aa20.22■□□□□ 0.83
LRRFIP1-202ENST00000289175 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
LRRFIP1-202ENST00000289175 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms