RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TNIKQ9UKE5 1360 aa35.4■■■■□ 3.26
PDLIM3-203ENST00000284771 CTTNBP2Q8WZ74 1663 aa35.37■■■■□ 3.25
PDLIM3-203ENST00000284771 KIAA0586Q9BVV6 1533 aa35.35■■■■□ 3.25
PDLIM3-203ENST00000284771 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
PDLIM3-203ENST00000284771 IQGAP2Q13576 1575 aa35.26■■■■□ 3.23
PDLIM3-203ENST00000284771 CLASP1Q7Z460 1538 aa35.26■■■■□ 3.23
PDLIM3-203ENST00000284771 RANGAP1P46060 587 aaPredicted RBP35.23■■■■□ 3.23
PDLIM3-203ENST00000284771 JPH4Q96JJ6 628 aa35.17■■■■□ 3.22
PDLIM3-203ENST00000284771 CEP162Q5TB80 1403 aa35.13■■■■□ 3.21
PDLIM3-203ENST00000284771 UGGT2Q9NYU1 1516 aa35.1■■■■□ 3.21
PDLIM3-203ENST00000284771 SHROOM2Q13796 1616 aa35.09■■■■□ 3.21
PDLIM3-203ENST00000284771 CLIP1P30622 1438 aa35.05■■■■□ 3.2
PDLIM3-203ENST00000284771 ARHGAP35Q9NRY4 1499 aa35.02■■■■□ 3.2
PDLIM3-203ENST00000284771 DISP1Q96F81 1524 aa35.02■■■■□ 3.2
PDLIM3-203ENST00000284771 PRG4Q92954 1404 aaPredicted RBP35.01■■■■□ 3.19
PDLIM3-203ENST00000284771 SAMD9Q5K651 1589 aa34.99■■■■□ 3.19
PDLIM3-203ENST00000284771 P3H3Q8IVL6 736 aa34.99■■■■□ 3.19
PDLIM3-203ENST00000284771 ERCC6L2Q5T890 1561 aa34.96■■■■□ 3.19
PDLIM3-203ENST00000284771 EFCAB5A4FU69 1503 aa34.94■■■■□ 3.18
PDLIM3-203ENST00000284771 KIAA0556O60303 1618 aa34.93■■■■□ 3.18
PDLIM3-203ENST00000284771 ARAP1Q96P48 1450 aa34.89■■■■□ 3.18
PDLIM3-203ENST00000284771 CARMIL2Q6F5E8 1435 aa34.88■■■■□ 3.17
PDLIM3-203ENST00000284771 FHOD3Q2V2M9 1422 aa34.88■■■■□ 3.17
PDLIM3-203ENST00000284771 ARHGEF11O15085 1522 aa34.76■■■■□ 3.16
PDLIM3-203ENST00000284771 TTBK1Q5TCY1 1321 aaPredicted RBP34.75■■■■□ 3.15
PDLIM3-203ENST00000284771 PTPRGP23470 1445 aa34.68■■■■□ 3.14
PDLIM3-203ENST00000284771 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
PDLIM3-203ENST00000284771 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
PDLIM3-203ENST00000284771 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
PDLIM3-203ENST00000284771 FMN1Q68DA7 1419 aa34.63■■■■□ 3.13
PDLIM3-203ENST00000284771 VPS8Q8N3P4 1428 aa34.63■■■■□ 3.13
PDLIM3-203ENST00000284771 PLB1Q6P1J6 1458 aa34.58■■■■□ 3.13
PDLIM3-203ENST00000284771 DNAJC5Q9H3Z4 198 aa34.56■■■■□ 3.12
PDLIM3-203ENST00000284771 PCF11O94913 1555 aaKnown RBP34.51■■■■□ 3.11
PDLIM3-203ENST00000284771 ABCA8O94911 1581 aa34.5■■■■□ 3.11
PDLIM3-203ENST00000284771 CASKIN1Q8WXD9 1431 aa34.5■■■■□ 3.11
PDLIM3-203ENST00000284771 UACAQ9BZF9 1416 aa34.47■■■■□ 3.11
PDLIM3-203ENST00000284771 RAPGEF6Q8TEU7 1601 aa34.47■■■■□ 3.11
PDLIM3-203ENST00000284771 CYB5RLQ6IPT4 315 aa34.46■■■■□ 3.11
PDLIM3-203ENST00000284771 ATP1B4Q9UN42 357 aaPredicted RBP34.44■■■■□ 3.1
PDLIM3-203ENST00000284771 FYCO1Q9BQS8 1478 aa34.43■■■■□ 3.1
PDLIM3-203ENST00000284771 NUP153P49790 1475 aaKnown RBP34.41■■■■□ 3.1
PDLIM3-203ENST00000284771 ABCC2Q92887 1545 aa34.38■■■■□ 3.09
PDLIM3-203ENST00000284771 LRRIQ1Q96JM4 1722 aa34.38■■■■□ 3.09
PDLIM3-203ENST00000284771 ARID3CA6NKF2 412 aa34.36■■■■□ 3.09
PDLIM3-203ENST00000284771 UHRF1BP1LA0JNW5 1464 aa34.36■■■■□ 3.09
PDLIM3-203ENST00000284771 ADCY10Q96PN6 1610 aa34.35■■■■□ 3.09
PDLIM3-203ENST00000284771 HECW1Q76N89 1606 aa34.35■■■■□ 3.09
PDLIM3-203ENST00000284771 EPRSP07814 1512 aaKnown RBP34.31■■■■□ 3.08
PDLIM3-203ENST00000284771 ATP10BO94823 1461 aa34.27■■■■□ 3.08
PDLIM3-203ENST00000284771 CDK13Q14004 1512 aaKnown RBP34.27■■■■□ 3.08
PDLIM3-203ENST00000284771 KDM5BQ9UGL1 1544 aa34.23■■■■□ 3.07
PDLIM3-203ENST00000284771 CCDC18Q5T9S5 1454 aa34.2■■■■□ 3.06
PDLIM3-203ENST00000284771 TIAM1Q13009 1591 aa34.19■■■■□ 3.06
PDLIM3-203ENST00000284771 APLP2Q06481 763 aa34.18■■■■□ 3.06
PDLIM3-203ENST00000284771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.17■■■■□ 3.06
PDLIM3-203ENST00000284771 HNRNPUL2Q1KMD3 747 aaKnown RBP34.17■■■■□ 3.06
PDLIM3-203ENST00000284771 MAP3K1Q13233 1512 aa34.17■■■■□ 3.06
PDLIM3-203ENST00000284771 KANK4Q5T7N3 995 aaPredicted RBP34.16■■■■□ 3.06
PDLIM3-203ENST00000284771 ZCCHC11Q5TAX3 1644 aaKnown RBP34.16■■■■□ 3.06
PDLIM3-203ENST00000284771 CFAP43Q8NDM7 1665 aa34.15■■■■□ 3.06
PDLIM3-203ENST00000284771 PPARGC1BQ86YN6 1023 aaKnown RBP34.11■■■■□ 3.05
PDLIM3-203ENST00000284771 MAGI3Q5TCQ9 1506 aa34.11■■■■□ 3.05
PDLIM3-203ENST00000284771 NPM1P06748 294 aaKnown RBP eCLIP34.07■■■■□ 3.04
PDLIM3-203ENST00000284771 LRRC9Q6ZRR7 1453 aa34.05■■■■□ 3.04
PDLIM3-203ENST00000284771 CDK11AQ9UQ88 783 aaPredicted RBP34.02■■■■□ 3.04
PDLIM3-203ENST00000284771 PLEKHD1A6NEE1 506 aa34.01■■■■□ 3.04
PDLIM3-203ENST00000284771 MTUS2Q5JR59 1369 aa33.98■■■■□ 3.03
PDLIM3-203ENST00000284771 ASXL2Q76L83 1435 aa33.96■■■■□ 3.03
PDLIM3-203ENST00000284771 TROQ12816 1431 aaPredicted RBP33.95■■■■□ 3.03
PDLIM3-203ENST00000284771 EHBP1L1Q8N3D4 1523 aa33.91■■■■□ 3.02
PDLIM3-203ENST00000284771 MAPKBP1O60336 1514 aa33.91■■■■□ 3.02
PDLIM3-203ENST00000284771 WDR7Q9Y4E6 1490 aa33.9■■■■□ 3.02
PDLIM3-203ENST00000284771 KCNH8Q96L42 1107 aa33.87■■■■□ 3.01
PDLIM3-203ENST00000284771 KIF14Q15058 1648 aa33.85■■■■□ 3.01
PDLIM3-203ENST00000284771 NCOA2Q15596 1464 aa33.79■■■■□ 3
PDLIM3-203ENST00000284771 SUPT6HQ7KZ85 1726 aaKnown RBP33.79■■■■□ 3
PDLIM3-203ENST00000284771 ABCC10Q5T3U5 1492 aa33.75■■■□□ 2.99
PDLIM3-203ENST00000284771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.74■■■□□ 2.99
PDLIM3-203ENST00000284771 PHLDB1Q86UU1 1377 aa33.72■■■□□ 2.99
PDLIM3-203ENST00000284771 TTC37Q6PGP7 1564 aa33.69■■■□□ 2.98
PDLIM3-203ENST00000284771 DIP2BQ9P265 1576 aa33.64■■■□□ 2.98
PDLIM3-203ENST00000284771 ABCA9Q8IUA7 1624 aa33.64■■■□□ 2.98
PDLIM3-203ENST00000284771 GPATCH8Q9UKJ3 1502 aaKnown RBP33.63■■■□□ 2.97
PDLIM3-203ENST00000284771 CCNB3Q8WWL7 1395 aa33.63■■■□□ 2.97
PDLIM3-203ENST00000284771 FAM69CQ0P6D2 419 aa33.61■■■□□ 2.97
PDLIM3-203ENST00000284771 GLI2P10070 1586 aa33.6■■■□□ 2.97
PDLIM3-203ENST00000284771 CDC42BPAQ5VT25 1732 aa33.59■■■□□ 2.97
PDLIM3-203ENST00000284771 MYOM3Q5VTT5 1437 aa33.59■■■□□ 2.97
PDLIM3-203ENST00000284771 KIF13AQ9H1H9 1805 aa33.57■■■□□ 2.96
PDLIM3-203ENST00000284771 PLCH2O75038 1416 aa33.54■■■□□ 2.96
PDLIM3-203ENST00000284771 CDC42BPBQ9Y5S2 1711 aa33.53■■■□□ 2.96
PDLIM3-203ENST00000284771 CD109Q6YHK3 1445 aa33.52■■■□□ 2.96
PDLIM3-203ENST00000284771 MYO5CQ9NQX4 1742 aa33.52■■■□□ 2.96
PDLIM3-203ENST00000284771 PREX2Q70Z35 1606 aa33.51■■■□□ 2.95
PDLIM3-203ENST00000284771 MAP3K4Q9Y6R4 1608 aa33.51■■■□□ 2.95
PDLIM3-203ENST00000284771 FGD6Q6ZV73 1430 aa33.5■■■□□ 2.95
PDLIM3-203ENST00000284771 CFDP1Q9UEE9 299 aaPredicted RBP33.5■■■□□ 2.95
PDLIM3-203ENST00000284771 ITSN2Q9NZM3 1697 aa33.49■■■□□ 2.95
PDLIM3-203ENST00000284771 MIA2Q96PC5 1412 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms