RNA–Protein interactions for RNA: ENST00000281047.3

MSGN1-201, Transcript of mesogenin 1, humanhuman

APPRIS P1 BASIC

Gene MSGN1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1-201ENST00000281047 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
MSGN1-201ENST00000281047 PRG4Q92954 1404 aaPredicted RBP33.41■■■□□ 2.94
MSGN1-201ENST00000281047 CARMIL1Q5VZK9 1371 aa33.34■■■□□ 2.93
MSGN1-201ENST00000281047 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
MSGN1-201ENST00000281047 RAPGEF2Q9Y4G8 1499 aa33.08■■■□□ 2.89
MSGN1-201ENST00000281047 IQGAP2Q13576 1575 aa33.04■■■□□ 2.88
MSGN1-201ENST00000281047 CARMIL2Q6F5E8 1435 aa33.02■■■□□ 2.88
MSGN1-201ENST00000281047 NPM1P06748 294 aaKnown RBP eCLIP33.01■■■□□ 2.87
MSGN1-201ENST00000281047 PTPRGP23470 1445 aa32.95■■■□□ 2.87
MSGN1-201ENST00000281047 ADCY10Q96PN6 1610 aa32.95■■■□□ 2.86
MSGN1-201ENST00000281047 TNIKQ9UKE5 1360 aa32.93■■■□□ 2.86
MSGN1-201ENST00000281047 MAPKBP1O60336 1514 aa32.88■■■□□ 2.85
MSGN1-201ENST00000281047 TTBK1Q5TCY1 1321 aaPredicted RBP32.85■■■□□ 2.85
MSGN1-201ENST00000281047 UGGT2Q9NYU1 1516 aa32.84■■■□□ 2.85
MSGN1-201ENST00000281047 DISP1Q96F81 1524 aa32.83■■■□□ 2.85
MSGN1-201ENST00000281047 KIF13AQ9H1H9 1805 aa32.81■■■□□ 2.84
MSGN1-201ENST00000281047 ABCC10Q5T3U5 1492 aa32.8■■■□□ 2.84
MSGN1-201ENST00000281047 PRXQ9BXM0 1461 aa32.8■■■□□ 2.84
MSGN1-201ENST00000281047 FAM69CQ0P6D2 419 aa32.76■■■□□ 2.83
MSGN1-201ENST00000281047 CTTNBP2Q8WZ74 1663 aa32.75■■■□□ 2.83
MSGN1-201ENST00000281047 KIAA0556O60303 1618 aa32.73■■■□□ 2.83
MSGN1-201ENST00000281047 ABCC2Q92887 1545 aa32.72■■■□□ 2.83
MSGN1-201ENST00000281047 UACAQ9BZF9 1416 aa32.71■■■□□ 2.83
MSGN1-201ENST00000281047 UHRF1BP1LA0JNW5 1464 aa32.71■■■□□ 2.83
MSGN1-201ENST00000281047 DIP2BQ9P265 1576 aa32.7■■■□□ 2.83
MSGN1-201ENST00000281047 CSRNP3Q8WYN3 585 aa32.66■■■□□ 2.82
MSGN1-201ENST00000281047 GOLGA3Q08378 1498 aa32.66■■■□□ 2.82
MSGN1-201ENST00000281047 EEA1Q15075 1411 aa32.63■■■□□ 2.81
MSGN1-201ENST00000281047 PLB1Q6P1J6 1458 aa32.58■■■□□ 2.81
MSGN1-201ENST00000281047 ASXL2Q76L83 1435 aa32.57■■■□□ 2.8
MSGN1-201ENST00000281047 KDM5BQ9UGL1 1544 aa32.55■■■□□ 2.8
MSGN1-201ENST00000281047 ZCCHC11Q5TAX3 1644 aaKnown RBP32.45■■■□□ 2.79
MSGN1-201ENST00000281047 GLI2P10070 1586 aa32.44■■■□□ 2.78
MSGN1-201ENST00000281047 FAM9AQ8IZU1 332 aaPredicted RBP32.43■■■□□ 2.78
MSGN1-201ENST00000281047 TSPOAP1O95153 1857 aa32.41■■■□□ 2.78
MSGN1-201ENST00000281047 ABCA8O94911 1581 aa32.4■■■□□ 2.78
MSGN1-201ENST00000281047 EPRSP07814 1512 aaKnown RBP32.36■■■□□ 2.77
MSGN1-201ENST00000281047 KDM6BO15054 1643 aa32.35■■■□□ 2.77
MSGN1-201ENST00000281047 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
MSGN1-201ENST00000281047 P3H3Q8IVL6 736 aa32.33■■■□□ 2.77
MSGN1-201ENST00000281047 WDR7Q9Y4E6 1490 aa32.32■■■□□ 2.76
MSGN1-201ENST00000281047 SAMD9Q5K651 1589 aa32.31■■■□□ 2.76
MSGN1-201ENST00000281047 AEBP2Q6ZN18 517 aaPredicted RBP32.29■■■□□ 2.76
MSGN1-201ENST00000281047 KIF21BO75037 1637 aa32.29■■■□□ 2.76
MSGN1-201ENST00000281047 MAP3K4Q9Y6R4 1608 aa32.25■■■□□ 2.75
MSGN1-201ENST00000281047 PPRC1Q5VV67 1664 aaKnown RBP32.24■■■□□ 2.75
MSGN1-201ENST00000281047 TEX14Q8IWB6 1497 aa32.21■■■□□ 2.75
MSGN1-201ENST00000281047 RANGAP1P46060 587 aaPredicted RBP32.2■■■□□ 2.75
MSGN1-201ENST00000281047 KCNH8Q96L42 1107 aa32.15■■■□□ 2.74
MSGN1-201ENST00000281047 ARID3CA6NKF2 412 aa32.13■■■□□ 2.73
MSGN1-201ENST00000281047 ATP10BO94823 1461 aa32.13■■■□□ 2.73
MSGN1-201ENST00000281047 RAPGEF6Q8TEU7 1601 aa32.13■■■□□ 2.73
MSGN1-201ENST00000281047 FHOD3Q2V2M9 1422 aa32.11■■■□□ 2.73
MSGN1-201ENST00000281047 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
MSGN1-201ENST00000281047 CD109Q6YHK3 1445 aa32.09■■■□□ 2.73
MSGN1-201ENST00000281047 CFAP43Q8NDM7 1665 aa32.08■■■□□ 2.73
MSGN1-201ENST00000281047 UBTFP17480 764 aaKnown RBP32.06■■■□□ 2.72
MSGN1-201ENST00000281047 MAGI3Q5TCQ9 1506 aa32.05■■■□□ 2.72
MSGN1-201ENST00000281047 EHMT2Q96KQ7 1210 aa32.02■■■□□ 2.72
MSGN1-201ENST00000281047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.01■■■□□ 2.71
MSGN1-201ENST00000281047 HNRNPUL2Q1KMD3 747 aaKnown RBP32.01■■■□□ 2.71
MSGN1-201ENST00000281047 NUP153P49790 1475 aaKnown RBP32.01■■■□□ 2.71
MSGN1-201ENST00000281047 COL17A1Q9UMD9 1497 aaPredicted RBP32.01■■■□□ 2.71
MSGN1-201ENST00000281047 ABCA9Q8IUA7 1624 aa31.9■■■□□ 2.7
MSGN1-201ENST00000281047 PLEKHD1A6NEE1 506 aa31.85■■■□□ 2.69
MSGN1-201ENST00000281047 FMN1Q68DA7 1419 aa31.83■■■□□ 2.69
MSGN1-201ENST00000281047 KDM4FA0A1W2PPD8 638 aa31.83■■■□□ 2.69
MSGN1-201ENST00000281047 ARHGAP35Q9NRY4 1499 aa31.82■■■□□ 2.68
MSGN1-201ENST00000281047 PHLDB1Q86UU1 1377 aa31.81■■■□□ 2.68
MSGN1-201ENST00000281047 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
MSGN1-201ENST00000281047 NEO1Q92859 1461 aa31.73■■■□□ 2.67
MSGN1-201ENST00000281047 HECW1Q76N89 1606 aa31.72■■■□□ 2.67
MSGN1-201ENST00000281047 CDK13Q14004 1512 aaKnown RBP31.72■■■□□ 2.67
MSGN1-201ENST00000281047 ATP1B4Q9UN42 357 aaPredicted RBP31.71■■■□□ 2.67
MSGN1-201ENST00000281047 ADGRL1O94910 1474 aa31.71■■■□□ 2.67
MSGN1-201ENST00000281047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.65■■■□□ 2.66
MSGN1-201ENST00000281047 CDK11AQ9UQ88 783 aaPredicted RBP31.63■■■□□ 2.65
MSGN1-201ENST00000281047 RAPGEF3O95398 923 aa31.59■■■□□ 2.65
MSGN1-201ENST00000281047 TTC37Q6PGP7 1564 aa31.59■■■□□ 2.65
MSGN1-201ENST00000281047 CFAP74Q9C0B2 1584 aa31.58■■■□□ 2.65
MSGN1-201ENST00000281047 FANCAO15360 1455 aa31.57■■■□□ 2.64
MSGN1-201ENST00000281047 AKNAQ7Z591 1439 aa31.54■■■□□ 2.64
MSGN1-201ENST00000281047 DENND4BO75064 1496 aaPredicted RBP31.51■■■□□ 2.63
MSGN1-201ENST00000281047 FRMPD1Q5SYB0 1578 aa31.51■■■□□ 2.63
MSGN1-201ENST00000281047 CASKIN1Q8WXD9 1431 aa31.49■■■□□ 2.63
MSGN1-201ENST00000281047 TROQ12816 1431 aaPredicted RBP31.49■■■□□ 2.63
MSGN1-201ENST00000281047 PLCH2O75038 1416 aa31.48■■■□□ 2.63
MSGN1-201ENST00000281047 CLIP1P30622 1438 aa31.48■■■□□ 2.63
MSGN1-201ENST00000281047 PCF11O94913 1555 aaKnown RBP31.46■■■□□ 2.63
MSGN1-201ENST00000281047 CCDC18Q5T9S5 1454 aa31.46■■■□□ 2.63
MSGN1-201ENST00000281047 KIF14Q15058 1648 aa31.46■■■□□ 2.63
MSGN1-201ENST00000281047 LRRIQ1Q96JM4 1722 aa31.42■■■□□ 2.62
MSGN1-201ENST00000281047 RICTORQ6R327 1708 aa31.41■■■□□ 2.62
MSGN1-201ENST00000281047 FYCO1Q9BQS8 1478 aa31.4■■■□□ 2.62
MSGN1-201ENST00000281047 MYO5CQ9NQX4 1742 aa31.39■■■□□ 2.62
MSGN1-201ENST00000281047 EFCAB2Q5VUJ9 269 aa31.39■■■□□ 2.62
MSGN1-201ENST00000281047 ARHGEF40Q8TER5 1519 aa31.36■■■□□ 2.61
MSGN1-201ENST00000281047 ZMYM4Q5VZL5 1548 aa31.34■■■□□ 2.61
MSGN1-201ENST00000281047 SCAPERQ9BY12 1400 aa31.34■■■□□ 2.61
MSGN1-201ENST00000281047 POGZQ7Z3K3 1410 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms