RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 KIAA0586Q9BVV6 1533 aa39.09■■■■□ 3.85
CTF1-201ENST00000279804 SHROOM2Q13796 1616 aa39.08■■■■□ 3.85
CTF1-201ENST00000279804 EHMT2Q96KQ7 1210 aa39.05■■■■□ 3.84
CTF1-201ENST00000279804 RIMBP3CA6NJZ7 1639 aa39.05■■■■□ 3.84
CTF1-201ENST00000279804 RIMBP3BA6NNM3 1639 aa39.05■■■■□ 3.84
CTF1-201ENST00000279804 RIMBP3Q9UFD9 1639 aa39.05■■■■□ 3.84
CTF1-201ENST00000279804 ARHGEF11O15085 1522 aa39.04■■■■□ 3.84
CTF1-201ENST00000279804 IQGAP2Q13576 1575 aa39.02■■■■□ 3.84
CTF1-201ENST00000279804 ERCC6L2Q5T890 1561 aa38.96■■■■□ 3.83
CTF1-201ENST00000279804 JPH4Q96JJ6 628 aa38.95■■■■□ 3.83
CTF1-201ENST00000279804 GOLGA3Q08378 1498 aa38.92■■■■□ 3.82
CTF1-201ENST00000279804 PRG4Q92954 1404 aaPredicted RBP38.88■■■■□ 3.81
CTF1-201ENST00000279804 UBTFP17480 764 aaKnown RBP38.79■■■■□ 3.8
CTF1-201ENST00000279804 UGGT2Q9NYU1 1516 aa38.78■■■■□ 3.8
CTF1-201ENST00000279804 ARAP1Q96P48 1450 aa38.76■■■■□ 3.8
CTF1-201ENST00000279804 DISP1Q96F81 1524 aa38.71■■■■□ 3.79
CTF1-201ENST00000279804 KIAA0556O60303 1618 aa38.67■■■■□ 3.78
CTF1-201ENST00000279804 RANGAP1P46060 587 aaPredicted RBP38.65■■■■□ 3.78
CTF1-201ENST00000279804 CARMIL2Q6F5E8 1435 aa38.64■■■■□ 3.78
CTF1-201ENST00000279804 CYB5RLQ6IPT4 315 aa38.63■■■■□ 3.77
CTF1-201ENST00000279804 SAMD9Q5K651 1589 aa38.57■■■■□ 3.76
CTF1-201ENST00000279804 LOC105371045A0A1W2PR82 267 aa38.55■■■■□ 3.76
CTF1-201ENST00000279804 TTBK1Q5TCY1 1321 aaPredicted RBP38.53■■■■□ 3.76
CTF1-201ENST00000279804 TNIKQ9UKE5 1360 aa38.49■■■■□ 3.75
CTF1-201ENST00000279804 P3H3Q8IVL6 736 aa38.49■■■■□ 3.75
CTF1-201ENST00000279804 PTPRGP23470 1445 aa38.44■■■■□ 3.74
CTF1-201ENST00000279804 EFCAB5A4FU69 1503 aa38.41■■■■□ 3.74
CTF1-201ENST00000279804 FHOD3Q2V2M9 1422 aa38.35■■■■□ 3.73
CTF1-201ENST00000279804 ARHGAP35Q9NRY4 1499 aa38.35■■■■□ 3.73
CTF1-201ENST00000279804 ADCY10Q96PN6 1610 aa38.3■■■■□ 3.72
CTF1-201ENST00000279804 CLIP1P30622 1438 aa38.25■■■■□ 3.71
CTF1-201ENST00000279804 PLB1Q6P1J6 1458 aa38.22■■■■□ 3.71
CTF1-201ENST00000279804 CEP162Q5TB80 1403 aa38.21■■■■□ 3.71
CTF1-201ENST00000279804 UACAQ9BZF9 1416 aa38.2■■■■□ 3.71
CTF1-201ENST00000279804 ABCA8O94911 1581 aa38.18■■■■□ 3.7
CTF1-201ENST00000279804 ABCC2Q92887 1545 aa38.17■■■■□ 3.7
CTF1-201ENST00000279804 UHRF1BP1LA0JNW5 1464 aa38.12■■■■□ 3.69
CTF1-201ENST00000279804 RAPGEF6Q8TEU7 1601 aa38.11■■■■□ 3.69
CTF1-201ENST00000279804 FMN1Q68DA7 1419 aa38.02■■■■□ 3.68
CTF1-201ENST00000279804 ZCCHC11Q5TAX3 1644 aaKnown RBP38.01■■■■□ 3.68
CTF1-201ENST00000279804 NPM1P06748 294 aaKnown RBP eCLIP37.98■■■■□ 3.67
CTF1-201ENST00000279804 KDM5BQ9UGL1 1544 aa37.97■■■■□ 3.67
CTF1-201ENST00000279804 ARID3CA6NKF2 412 aa37.95■■■■□ 3.67
CTF1-201ENST00000279804 NUP153P49790 1475 aaKnown RBP37.94■■■■□ 3.66
CTF1-201ENST00000279804 PCF11O94913 1555 aaKnown RBP37.92■■■■□ 3.66
CTF1-201ENST00000279804 LRRIQ1Q96JM4 1722 aa37.88■■■■□ 3.65
CTF1-201ENST00000279804 HECW1Q76N89 1606 aa37.88■■■■□ 3.65
CTF1-201ENST00000279804 MAPKBP1O60336 1514 aa37.87■■■■□ 3.65
CTF1-201ENST00000279804 ATP1B4Q9UN42 357 aaPredicted RBP37.85■■■■□ 3.65
CTF1-201ENST00000279804 ATP10BO94823 1461 aa37.85■■■■□ 3.65
CTF1-201ENST00000279804 CASKIN1Q8WXD9 1431 aa37.81■■■■□ 3.64
CTF1-201ENST00000279804 ASXL2Q76L83 1435 aa37.79■■■■□ 3.64
CTF1-201ENST00000279804 CDK13Q14004 1512 aaKnown RBP37.78■■■■□ 3.64
CTF1-201ENST00000279804 FYCO1Q9BQS8 1478 aa37.76■■■■□ 3.63
CTF1-201ENST00000279804 EPRSP07814 1512 aaKnown RBP37.75■■■■□ 3.63
CTF1-201ENST00000279804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.74■■■■□ 3.63
CTF1-201ENST00000279804 HNRNPUL2Q1KMD3 747 aaKnown RBP37.74■■■■□ 3.63
CTF1-201ENST00000279804 KIF13AQ9H1H9 1805 aa37.73■■■■□ 3.63
CTF1-201ENST00000279804 VPS8Q8N3P4 1428 aa37.69■■■■□ 3.62
CTF1-201ENST00000279804 TRHP20396 242 aaPredicted RBP37.69■■■■□ 3.62
CTF1-201ENST00000279804 WDR7Q9Y4E6 1490 aa37.66■■■■□ 3.62
CTF1-201ENST00000279804 DIP2BQ9P265 1576 aa37.66■■■■□ 3.62
CTF1-201ENST00000279804 ABCC10Q5T3U5 1492 aa37.63■■■■□ 3.61
CTF1-201ENST00000279804 CCDC18Q5T9S5 1454 aa37.6■■■■□ 3.61
CTF1-201ENST00000279804 FAM69CQ0P6D2 419 aa37.54■■■■□ 3.6
CTF1-201ENST00000279804 KCNH8Q96L42 1107 aa37.54■■■■□ 3.6
CTF1-201ENST00000279804 PLEKHD1A6NEE1 506 aa37.51■■■■□ 3.6
CTF1-201ENST00000279804 GLI2P10070 1586 aa37.48■■■■□ 3.59
CTF1-201ENST00000279804 TSPOAP1O95153 1857 aa37.48■■■■□ 3.59
CTF1-201ENST00000279804 CFAP43Q8NDM7 1665 aa37.47■■■■□ 3.59
CTF1-201ENST00000279804 MAGI3Q5TCQ9 1506 aa37.47■■■■□ 3.59
CTF1-201ENST00000279804 CDK11AQ9UQ88 783 aaPredicted RBP37.43■■■■□ 3.58
CTF1-201ENST00000279804 MAP3K4Q9Y6R4 1608 aa37.41■■■■□ 3.58
CTF1-201ENST00000279804 TIAM1Q13009 1591 aa37.4■■■■□ 3.58
CTF1-201ENST00000279804 KIF14Q15058 1648 aa37.39■■■■□ 3.58
CTF1-201ENST00000279804 TROQ12816 1431 aaPredicted RBP37.38■■■■□ 3.57
CTF1-201ENST00000279804 ABCA9Q8IUA7 1624 aa37.37■■■■□ 3.57
CTF1-201ENST00000279804 PPRC1Q5VV67 1664 aaKnown RBP37.33■■■■□ 3.57
CTF1-201ENST00000279804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.33■■■■□ 3.57
CTF1-201ENST00000279804 TTC37Q6PGP7 1564 aa37.32■■■■□ 3.57
CTF1-201ENST00000279804 MTUS2Q5JR59 1369 aa37.27■■■■□ 3.56
CTF1-201ENST00000279804 MAP3K1Q13233 1512 aa37.26■■■■□ 3.56
CTF1-201ENST00000279804 CD109Q6YHK3 1445 aa37.25■■■■□ 3.55
CTF1-201ENST00000279804 EHBP1L1Q8N3D4 1523 aa37.24■■■■□ 3.55
CTF1-201ENST00000279804 APLP2Q06481 763 aa37.2■■■■□ 3.55
CTF1-201ENST00000279804 LRRC9Q6ZRR7 1453 aa37.2■■■■□ 3.54
CTF1-201ENST00000279804 KANK4Q5T7N3 995 aaPredicted RBP37.18■■■■□ 3.54
CTF1-201ENST00000279804 MYO5CQ9NQX4 1742 aa37.18■■■■□ 3.54
CTF1-201ENST00000279804 SUPT6HQ7KZ85 1726 aaKnown RBP37.13■■■■□ 3.53
CTF1-201ENST00000279804 CDC42BPAQ5VT25 1732 aa37.12■■■■□ 3.53
CTF1-201ENST00000279804 CDC42BPBQ9Y5S2 1711 aa37.09■■■■□ 3.53
CTF1-201ENST00000279804 TEX14Q8IWB6 1497 aa37.08■■■■□ 3.53
CTF1-201ENST00000279804 PREX2Q70Z35 1606 aa37.05■■■■□ 3.52
CTF1-201ENST00000279804 NCOA2Q15596 1464 aa37.03■■■■□ 3.52
CTF1-201ENST00000279804 PLCH2O75038 1416 aa37.03■■■■□ 3.52
CTF1-201ENST00000279804 FANCAO15360 1455 aa36.98■■■■□ 3.51
CTF1-201ENST00000279804 ARHGAP5Q13017 1502 aa36.98■■■■□ 3.51
CTF1-201ENST00000279804 GPATCH8Q9UKJ3 1502 aaKnown RBP36.97■■■■□ 3.51
CTF1-201ENST00000279804 CFAP74Q9C0B2 1584 aa36.96■■■■□ 3.51
CTF1-201ENST00000279804 CCNB3Q8WWL7 1395 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms