RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.82
TMEM47-201ENST00000275954 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
TMEM47-201ENST00000275954 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
TMEM47-201ENST00000275954 SLC4A1APQ9BWU0 796 aaKnown RBP20.11■□□□□ 0.81
TMEM47-201ENST00000275954 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
TMEM47-201ENST00000275954 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
TMEM47-201ENST00000275954 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
TMEM47-201ENST00000275954 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
TMEM47-201ENST00000275954 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
TMEM47-201ENST00000275954 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
TMEM47-201ENST00000275954 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
TMEM47-201ENST00000275954 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
TMEM47-201ENST00000275954 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
TMEM47-201ENST00000275954 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM47-201ENST00000275954 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
TMEM47-201ENST00000275954 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
TMEM47-201ENST00000275954 FKBP8Q14318 412 aa19.92■□□□□ 0.78
TMEM47-201ENST00000275954 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
TMEM47-201ENST00000275954 JPH4Q96JJ6 628 aa19.9■□□□□ 0.78
TMEM47-201ENST00000275954 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
TMEM47-201ENST00000275954 CCNB3Q8WWL7 1395 aa19.88■□□□□ 0.77
TMEM47-201ENST00000275954 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
TMEM47-201ENST00000275954 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
TMEM47-201ENST00000275954 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
TMEM47-201ENST00000275954 MLECQ14165 292 aa19.86■□□□□ 0.77
TMEM47-201ENST00000275954 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
TMEM47-201ENST00000275954 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
TMEM47-201ENST00000275954 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
TMEM47-201ENST00000275954 ARID4BQ4LE39 1312 aaPredicted RBP19.82■□□□□ 0.76
TMEM47-201ENST00000275954 KDM2AQ9Y2K7 1162 aa19.81■□□□□ 0.76
TMEM47-201ENST00000275954 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
TMEM47-201ENST00000275954 FHOD3Q2V2M9 1422 aa19.79■□□□□ 0.76
TMEM47-201ENST00000275954 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
TMEM47-201ENST00000275954 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
TMEM47-201ENST00000275954 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
TMEM47-201ENST00000275954 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
TMEM47-201ENST00000275954 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
TMEM47-201ENST00000275954 RGL3Q3MIN7 710 aa19.74■□□□□ 0.75
TMEM47-201ENST00000275954 IGF1RP08069 1367 aa19.73■□□□□ 0.75
TMEM47-201ENST00000275954 CFTRP13569 1480 aa19.71■□□□□ 0.75
TMEM47-201ENST00000275954 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.74
TMEM47-201ENST00000275954 MYT1Q01538 1121 aa19.68■□□□□ 0.74
TMEM47-201ENST00000275954 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
TMEM47-201ENST00000275954 CLSPNQ9HAW4 1339 aa19.67■□□□□ 0.74
TMEM47-201ENST00000275954 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
TMEM47-201ENST00000275954 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
TMEM47-201ENST00000275954 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
TMEM47-201ENST00000275954 FOXD1Q16676 465 aa19.64■□□□□ 0.73
TMEM47-201ENST00000275954 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
TMEM47-201ENST00000275954 GGT6Q6P531 493 aa19.6■□□□□ 0.73
TMEM47-201ENST00000275954 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
TMEM47-201ENST00000275954 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.72
TMEM47-201ENST00000275954 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.72
TMEM47-201ENST00000275954 TMC1Q8TDI8 760 aa19.56■□□□□ 0.72
TMEM47-201ENST00000275954 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
TMEM47-201ENST00000275954 TOPBP1Q92547 1522 aa19.53■□□□□ 0.72
TMEM47-201ENST00000275954 CUX1P39880 1505 aa19.53■□□□□ 0.72
TMEM47-201ENST00000275954 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
TMEM47-201ENST00000275954 DHX57Q6P158 1386 aaKnown RBP19.52■□□□□ 0.72
TMEM47-201ENST00000275954 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
TMEM47-201ENST00000275954 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
TMEM47-201ENST00000275954 PTPRGP23470 1445 aa19.47■□□□□ 0.71
TMEM47-201ENST00000275954 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
TMEM47-201ENST00000275954 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
TMEM47-201ENST00000275954 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
TMEM47-201ENST00000275954 ZNF644Q9H582 1327 aaPredicted RBP19.45■□□□□ 0.7
TMEM47-201ENST00000275954 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
TMEM47-201ENST00000275954 KIF21BO75037 1637 aa19.4■□□□□ 0.7
TMEM47-201ENST00000275954 FAM69CQ0P6D2 419 aa19.4■□□□□ 0.7
TMEM47-201ENST00000275954 NUTM2DQ5VT03 806 aaPredicted RBP19.4■□□□□ 0.7
TMEM47-201ENST00000275954 NPM2Q86SE8 214 aaKnown RBP19.39■□□□□ 0.69
TMEM47-201ENST00000275954 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
TMEM47-201ENST00000275954 HSPA5P11021 654 aaKnown RBP19.39■□□□□ 0.69
TMEM47-201ENST00000275954 BCL11AQ9H165 835 aa19.39■□□□□ 0.69
TMEM47-201ENST00000275954 FMN1Q68DA7 1419 aa19.38■□□□□ 0.69
TMEM47-201ENST00000275954 MPHOSPH9Q99550 1183 aa19.36■□□□□ 0.69
TMEM47-201ENST00000275954 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
TMEM47-201ENST00000275954 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
TMEM47-201ENST00000275954 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TMEM47-201ENST00000275954 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
TMEM47-201ENST00000275954 RTL5Q5HYW3 569 aaPredicted RBP19.35■□□□□ 0.69
TMEM47-201ENST00000275954 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
TMEM47-201ENST00000275954 KIF3BO15066 747 aa19.33■□□□□ 0.68
TMEM47-201ENST00000275954 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
TMEM47-201ENST00000275954 EFCAB2Q5VUJ9 269 aa19.32■□□□□ 0.68
TMEM47-201ENST00000275954 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
TMEM47-201ENST00000275954 PKD2Q13563 968 aa19.32■□□□□ 0.68
TMEM47-201ENST00000275954 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.68
TMEM47-201ENST00000275954 GRIN2BQ13224 1484 aa19.32■□□□□ 0.68
TMEM47-201ENST00000275954 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
TMEM47-201ENST00000275954 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
TMEM47-201ENST00000275954 PHLDB1Q86UU1 1377 aa19.3■□□□□ 0.68
TMEM47-201ENST00000275954 PRG4Q92954 1404 aaPredicted RBP19.29■□□□□ 0.68
TMEM47-201ENST00000275954 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
TMEM47-201ENST00000275954 AFAP1Q8N556 730 aa19.25■□□□□ 0.67
TMEM47-201ENST00000275954 PRXQ9BXM0 1461 aa19.23■□□□□ 0.67
TMEM47-201ENST00000275954 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
TMEM47-201ENST00000275954 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
TMEM47-201ENST00000275954 ZBTB7CA1YPR0 619 aa19.2■□□□□ 0.66
TMEM47-201ENST00000275954 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms