RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 CFTRP13569 1480 aa15.8■□□□□ 0.12
SFXN5-201ENST00000272433 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
SFXN5-201ENST00000272433 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
SFXN5-201ENST00000272433 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
SFXN5-201ENST00000272433 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
SFXN5-201ENST00000272433 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
SFXN5-201ENST00000272433 CFDP1Q9UEE9 299 aaPredicted RBP15.75■□□□□ 0.11
SFXN5-201ENST00000272433 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
SFXN5-201ENST00000272433 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
SFXN5-201ENST00000272433 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.12e-7■■■■□ 22.1
SFXN5-201ENST00000272433 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
SFXN5-201ENST00000272433 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
SFXN5-201ENST00000272433 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
SFXN5-201ENST00000272433 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
SFXN5-201ENST00000272433 CUX1P39880 1505 aa15.67■□□□□ 0.1
SFXN5-201ENST00000272433 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
SFXN5-201ENST00000272433 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
SFXN5-201ENST00000272433 KDM2AQ9Y2K7 1162 aa15.65■□□□□ 0.1
SFXN5-201ENST00000272433 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
SFXN5-201ENST00000272433 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
SFXN5-201ENST00000272433 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.09
SFXN5-201ENST00000272433 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
SFXN5-201ENST00000272433 NEFLP07196 543 aa15.63■□□□□ 0.09
SFXN5-201ENST00000272433 ANP32CO43423 234 aa15.58■□□□□ 0.09
SFXN5-201ENST00000272433 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
SFXN5-201ENST00000272433 TOPBP1Q92547 1522 aa15.56■□□□□ 0.08
SFXN5-201ENST00000272433 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
SFXN5-201ENST00000272433 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
SFXN5-201ENST00000272433 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
SFXN5-201ENST00000272433 FOXD1Q16676 465 aa15.55■□□□□ 0.08
SFXN5-201ENST00000272433 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
SFXN5-201ENST00000272433 MYT1Q01538 1121 aa15.53■□□□□ 0.08
SFXN5-201ENST00000272433 MIER1Q8N108 512 aa15.52■□□□□ 0.08
SFXN5-201ENST00000272433 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.08
SFXN5-201ENST00000272433 ARHGAP35Q9NRY4 1499 aa15.51■□□□□ 0.07
SFXN5-201ENST00000272433 BCANQ96GW7 911 aa15.5■□□□□ 0.07
SFXN5-201ENST00000272433 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
SFXN5-201ENST00000272433 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
SFXN5-201ENST00000272433 KIF21BO75037 1637 aa15.49■□□□□ 0.07
SFXN5-201ENST00000272433 RAB3GAP2Q9H2M9 1393 aa15.47■□□□□ 0.07
SFXN5-201ENST00000272433 GTF3C3Q9Y5Q9 886 aa15.46■□□□□ 0.07
SFXN5-201ENST00000272433 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.065e-8■■■□□ 16
SFXN5-201ENST00000272433 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
SFXN5-201ENST00000272433 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
SFXN5-201ENST00000272433 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
SFXN5-201ENST00000272433 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
SFXN5-201ENST00000272433 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.06
SFXN5-201ENST00000272433 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
SFXN5-201ENST00000272433 PTPRGP23470 1445 aa15.38■□□□□ 0.05
SFXN5-201ENST00000272433 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
SFXN5-201ENST00000272433 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
SFXN5-201ENST00000272433 EIF4G2P78344 907 aaKnown RBP eCLIP15.37■□□□□ 0.05
SFXN5-201ENST00000272433 PHLDB1Q86UU1 1377 aa15.37■□□□□ 0.05
SFXN5-201ENST00000272433 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
SFXN5-201ENST00000272433 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
SFXN5-201ENST00000272433 ACIN1Q9UKV3 1341 aaKnown RBP15.34■□□□□ 0.05
SFXN5-201ENST00000272433 PKD2Q13563 968 aa15.34■□□□□ 0.05
SFXN5-201ENST00000272433 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
SFXN5-201ENST00000272433 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
SFXN5-201ENST00000272433 LAMC3Q9Y6N6 1575 aa15.33■□□□□ 0.04
SFXN5-201ENST00000272433 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
SFXN5-201ENST00000272433 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
SFXN5-201ENST00000272433 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
SFXN5-201ENST00000272433 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 EFCAB2Q5VUJ9 269 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 GGT6Q6P531 493 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
SFXN5-201ENST00000272433 MLECQ14165 292 aa15.29■□□□□ 0.04
SFXN5-201ENST00000272433 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
SFXN5-201ENST00000272433 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
SFXN5-201ENST00000272433 HNRNPUQ00839 825 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■□□□ 12
SFXN5-201ENST00000272433 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
SFXN5-201ENST00000272433 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.04
SFXN5-201ENST00000272433 DHX57Q6P158 1386 aaKnown RBP15.27■□□□□ 0.04
SFXN5-201ENST00000272433 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.03
SFXN5-201ENST00000272433 NUP155O75694 1391 aa15.26■□□□□ 0.03
SFXN5-201ENST00000272433 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
SFXN5-201ENST00000272433 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
SFXN5-201ENST00000272433 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
SFXN5-201ENST00000272433 CASKIN1Q8WXD9 1431 aa15.23■□□□□ 0.03
SFXN5-201ENST00000272433 MRS2Q9HD23 443 aa15.22■□□□□ 0.03
SFXN5-201ENST00000272433 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
SFXN5-201ENST00000272433 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
SFXN5-201ENST00000272433 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
SFXN5-201ENST00000272433 KIF3BO15066 747 aa15.21■□□□□ 0.02
SFXN5-201ENST00000272433 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
SFXN5-201ENST00000272433 ANKRD30AQ9BXX3 1397 aa15.2■□□□□ 0.02
SFXN5-201ENST00000272433 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
SFXN5-201ENST00000272433 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
SFXN5-201ENST00000272433 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
SFXN5-201ENST00000272433 NCOA2Q15596 1464 aa15.17■□□□□ 0.02
SFXN5-201ENST00000272433 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
SFXN5-201ENST00000272433 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
SFXN5-201ENST00000272433 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
SFXN5-201ENST00000272433 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
SFXN5-201ENST00000272433 AFAP1Q8N556 730 aa15.11■□□□□ 0.01
SFXN5-201ENST00000272433 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
SFXN5-201ENST00000272433 FKBP8Q14318 412 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms