RNA–Protein interactions for RNA: ENST00000268220.11

SEC11A-201, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-201ENST00000268220 CARMIL1Q5VZK9 1371 aa33.7■■■□□ 2.98
SEC11A-201ENST00000268220 TRHP20396 242 aaPredicted RBP33.67■■■□□ 2.98
SEC11A-201ENST00000268220 PRG4Q92954 1404 aaPredicted RBP33.66■■■□□ 2.98
SEC11A-201ENST00000268220 RUSC2Q8N2Y8 1516 aa33.63■■■□□ 2.97
SEC11A-201ENST00000268220 KIAA0586Q9BVV6 1533 aa33.6■■■□□ 2.97
SEC11A-201ENST00000268220 RAPGEF2Q9Y4G8 1499 aa33.43■■■□□ 2.94
SEC11A-201ENST00000268220 IQGAP2Q13576 1575 aa33.32■■■□□ 2.92
SEC11A-201ENST00000268220 CARMIL2Q6F5E8 1435 aa33.3■■■□□ 2.92
SEC11A-201ENST00000268220 EEA1Q15075 1411 aa33.29■■■□□ 2.92
SEC11A-201ENST00000268220 FAM9AQ8IZU1 332 aaPredicted RBP33.29■■■□□ 2.92
SEC11A-201ENST00000268220 LOC105371045A0A1W2PR82 267 aa33.27■■■□□ 2.92
SEC11A-201ENST00000268220 NPM1P06748 294 aaKnown RBP eCLIP33.26■■■□□ 2.92
SEC11A-201ENST00000268220 PTPRGP23470 1445 aa33.23■■■□□ 2.91
SEC11A-201ENST00000268220 TTBK1Q5TCY1 1321 aaPredicted RBP33.21■■■□□ 2.91
SEC11A-201ENST00000268220 TNIKQ9UKE5 1360 aa33.2■■■□□ 2.9
SEC11A-201ENST00000268220 PRXQ9BXM0 1461 aa33.18■■■□□ 2.9
SEC11A-201ENST00000268220 CSRNP3Q8WYN3 585 aa33.14■■■□□ 2.9
SEC11A-201ENST00000268220 ADCY10Q96PN6 1610 aa33.12■■■□□ 2.89
SEC11A-201ENST00000268220 UGGT2Q9NYU1 1516 aa33.12■■■□□ 2.89
SEC11A-201ENST00000268220 DISP1Q96F81 1524 aa33.11■■■□□ 2.89
SEC11A-201ENST00000268220 CTTNBP2Q8WZ74 1663 aa33.05■■■□□ 2.88
SEC11A-201ENST00000268220 MAPKBP1O60336 1514 aa33.01■■■□□ 2.87
SEC11A-201ENST00000268220 KIAA0556O60303 1618 aa32.98■■■□□ 2.87
SEC11A-201ENST00000268220 FAM69CQ0P6D2 419 aa32.97■■■□□ 2.87
SEC11A-201ENST00000268220 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
SEC11A-201ENST00000268220 UACAQ9BZF9 1416 aa32.96■■■□□ 2.87
SEC11A-201ENST00000268220 ABCC10Q5T3U5 1492 aa32.95■■■□□ 2.86
SEC11A-201ENST00000268220 ABCC2Q92887 1545 aa32.93■■■□□ 2.86
SEC11A-201ENST00000268220 UHRF1BP1LA0JNW5 1464 aa32.93■■■□□ 2.86
SEC11A-201ENST00000268220 KIF13AQ9H1H9 1805 aa32.91■■■□□ 2.86
SEC11A-201ENST00000268220 KIF21BO75037 1637 aa32.9■■■□□ 2.86
SEC11A-201ENST00000268220 DIP2BQ9P265 1576 aa32.83■■■□□ 2.85
SEC11A-201ENST00000268220 PLB1Q6P1J6 1458 aa32.78■■■□□ 2.84
SEC11A-201ENST00000268220 ASXL2Q76L83 1435 aa32.78■■■□□ 2.84
SEC11A-201ENST00000268220 KDM5BQ9UGL1 1544 aa32.76■■■□□ 2.84
SEC11A-201ENST00000268220 P3H3Q8IVL6 736 aa32.75■■■□□ 2.83
SEC11A-201ENST00000268220 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
SEC11A-201ENST00000268220 RANGAP1P46060 587 aaPredicted RBP32.68■■■□□ 2.82
SEC11A-201ENST00000268220 ZCCHC11Q5TAX3 1644 aaKnown RBP32.66■■■□□ 2.82
SEC11A-201ENST00000268220 ABCA8O94911 1581 aa32.65■■■□□ 2.82
SEC11A-201ENST00000268220 SAMD9Q5K651 1589 aa32.61■■■□□ 2.81
SEC11A-201ENST00000268220 GLI2P10070 1586 aa32.59■■■□□ 2.81
SEC11A-201ENST00000268220 TSPOAP1O95153 1857 aa32.58■■■□□ 2.81
SEC11A-201ENST00000268220 UBTFP17480 764 aaKnown RBP32.58■■■□□ 2.81
SEC11A-201ENST00000268220 EPRSP07814 1512 aaKnown RBP32.57■■■□□ 2.8
SEC11A-201ENST00000268220 WDR7Q9Y4E6 1490 aa32.54■■■□□ 2.8
SEC11A-201ENST00000268220 CEP162Q5TB80 1403 aa32.51■■■□□ 2.79
SEC11A-201ENST00000268220 ARID3CA6NKF2 412 aa32.5■■■□□ 2.79
SEC11A-201ENST00000268220 KCNH8Q96L42 1107 aa32.47■■■□□ 2.79
SEC11A-201ENST00000268220 FHOD3Q2V2M9 1422 aa32.46■■■□□ 2.79
SEC11A-201ENST00000268220 KDM6BO15054 1643 aa32.45■■■□□ 2.78
SEC11A-201ENST00000268220 EFCAB5A4FU69 1503 aa32.44■■■□□ 2.78
SEC11A-201ENST00000268220 ATP10BO94823 1461 aa32.43■■■□□ 2.78
SEC11A-201ENST00000268220 RAPGEF6Q8TEU7 1601 aa32.41■■■□□ 2.78
SEC11A-201ENST00000268220 MAP3K4Q9Y6R4 1608 aa32.41■■■□□ 2.78
SEC11A-201ENST00000268220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.4■■■□□ 2.78
SEC11A-201ENST00000268220 HNRNPUL2Q1KMD3 747 aaKnown RBP32.4■■■□□ 2.78
SEC11A-201ENST00000268220 TEX14Q8IWB6 1497 aa32.37■■■□□ 2.77
SEC11A-201ENST00000268220 PPRC1Q5VV67 1664 aaKnown RBP32.37■■■□□ 2.77
SEC11A-201ENST00000268220 CD109Q6YHK3 1445 aa32.32■■■□□ 2.77
SEC11A-201ENST00000268220 NUP153P49790 1475 aaKnown RBP32.31■■■□□ 2.76
SEC11A-201ENST00000268220 AEBP2Q6ZN18 517 aaPredicted RBP32.3■■■□□ 2.76
SEC11A-201ENST00000268220 CFAP43Q8NDM7 1665 aa32.26■■■□□ 2.76
SEC11A-201ENST00000268220 CLIP1P30622 1438 aa32.24■■■□□ 2.75
SEC11A-201ENST00000268220 MAGI3Q5TCQ9 1506 aa32.23■■■□□ 2.75
SEC11A-201ENST00000268220 ARHGAP35Q9NRY4 1499 aa32.21■■■□□ 2.75
SEC11A-201ENST00000268220 PLEKHD1A6NEE1 506 aa32.21■■■□□ 2.75
SEC11A-201ENST00000268220 FMN1Q68DA7 1419 aa32.2■■■□□ 2.75
SEC11A-201ENST00000268220 COL17A1Q9UMD9 1497 aaPredicted RBP32.18■■■□□ 2.74
SEC11A-201ENST00000268220 ATP1B4Q9UN42 357 aaPredicted RBP32.17■■■□□ 2.74
SEC11A-201ENST00000268220 ABCA9Q8IUA7 1624 aa32.11■■■□□ 2.73
SEC11A-201ENST00000268220 CDK13Q14004 1512 aaKnown RBP32.03■■■□□ 2.72
SEC11A-201ENST00000268220 HECW1Q76N89 1606 aa32.03■■■□□ 2.72
SEC11A-201ENST00000268220 PHLDB1Q86UU1 1377 aa32.02■■■□□ 2.72
SEC11A-201ENST00000268220 CDK11AQ9UQ88 783 aaPredicted RBP32.01■■■□□ 2.71
SEC11A-201ENST00000268220 VPS8Q8N3P4 1428 aa32■■■□□ 2.71
SEC11A-201ENST00000268220 ARAP3Q8WWN8 1544 aa31.97■■■□□ 2.71
SEC11A-201ENST00000268220 NEO1Q92859 1461 aa31.95■■■□□ 2.7
SEC11A-201ENST00000268220 KDM4FA0A1W2PPD8 638 aa31.92■■■□□ 2.7
SEC11A-201ENST00000268220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.91■■■□□ 2.7
SEC11A-201ENST00000268220 TRIM26Q12899 539 aaPredicted RBP31.89■■■□□ 2.7
SEC11A-201ENST00000268220 CASKIN1Q8WXD9 1431 aa31.87■■■□□ 2.69
SEC11A-201ENST00000268220 RAPGEF3O95398 923 aa31.85■■■□□ 2.69
SEC11A-201ENST00000268220 TTC37Q6PGP7 1564 aa31.83■■■□□ 2.69
SEC11A-201ENST00000268220 FANCAO15360 1455 aa31.83■■■□□ 2.69
SEC11A-201ENST00000268220 PCGF6Q9BYE7 350 aa31.82■■■□□ 2.68
SEC11A-201ENST00000268220 PCF11O94913 1555 aaKnown RBP31.81■■■□□ 2.68
SEC11A-201ENST00000268220 TROQ12816 1431 aaPredicted RBP31.8■■■□□ 2.68
SEC11A-201ENST00000268220 CCDC18Q5T9S5 1454 aa31.79■■■□□ 2.68
SEC11A-201ENST00000268220 AKNAQ7Z591 1439 aa31.79■■■□□ 2.68
SEC11A-201ENST00000268220 CFAP74Q9C0B2 1584 aa31.78■■■□□ 2.68
SEC11A-201ENST00000268220 ADGRL1O94910 1474 aa31.77■■■□□ 2.68
SEC11A-201ENST00000268220 PLCH2O75038 1416 aa31.77■■■□□ 2.68
SEC11A-201ENST00000268220 FYCO1Q9BQS8 1478 aa31.76■■■□□ 2.67
SEC11A-201ENST00000268220 LRRIQ1Q96JM4 1722 aa31.76■■■□□ 2.67
SEC11A-201ENST00000268220 DENND4BO75064 1496 aaPredicted RBP31.74■■■□□ 2.67
SEC11A-201ENST00000268220 KIF14Q15058 1648 aa31.74■■■□□ 2.67
SEC11A-201ENST00000268220 EFCAB2Q5VUJ9 269 aa31.71■■■□□ 2.67
SEC11A-201ENST00000268220 FRMPD1Q5SYB0 1578 aa31.66■■■□□ 2.66
SEC11A-201ENST00000268220 MYO5CQ9NQX4 1742 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms