RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
PCNP-201ENST00000265260 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
PCNP-201ENST00000265260 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
PCNP-201ENST00000265260 PRKCSHP14314 528 aaPredicted RBP23.2■■□□□ 1.3
PCNP-201ENST00000265260 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
PCNP-201ENST00000265260 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
PCNP-201ENST00000265260 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
PCNP-201ENST00000265260 ANP32CO43423 234 aa23.18■■□□□ 1.3
PCNP-201ENST00000265260 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
PCNP-201ENST00000265260 SETD5Q9C0A6 1442 aa23.15■■□□□ 1.3
PCNP-201ENST00000265260 ERICH6BQ5W0A0 696 aa23.13■■□□□ 1.29
PCNP-201ENST00000265260 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
PCNP-201ENST00000265260 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
PCNP-201ENST00000265260 DEKP35659 375 aaKnown RBP23.06■■□□□ 1.28
PCNP-201ENST00000265260 SIN3AQ96ST3 1273 aa23.04■■□□□ 1.28
PCNP-201ENST00000265260 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
PCNP-201ENST00000265260 HMGXB3Q12766 1538 aa23■■□□□ 1.27
PCNP-201ENST00000265260 PPP4R2Q9NY27 417 aa22.97■■□□□ 1.27
PCNP-201ENST00000265260 TIAM1Q13009 1591 aa22.96■■□□□ 1.27
PCNP-201ENST00000265260 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
PCNP-201ENST00000265260 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
PCNP-201ENST00000265260 LRRC9Q6ZRR7 1453 aa22.87■■□□□ 1.25
PCNP-201ENST00000265260 IRX6P78412 446 aaPredicted RBP22.87■■□□□ 1.25
PCNP-201ENST00000265260 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
PCNP-201ENST00000265260 PHLDB1Q86UU1 1377 aa22.84■■□□□ 1.25
PCNP-201ENST00000265260 NOP58Q9Y2X3 529 aaKnown RBP22.84■■□□□ 1.25
PCNP-201ENST00000265260 NESP48681 1621 aa22.83■■□□□ 1.25
PCNP-201ENST00000265260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.79■■□□□ 1.24
PCNP-201ENST00000265260 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
PCNP-201ENST00000265260 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
PCNP-201ENST00000265260 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
PCNP-201ENST00000265260 CUX1P39880 1505 aa22.74■■□□□ 1.23
PCNP-201ENST00000265260 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
PCNP-201ENST00000265260 PAK3O75914 559 aaPredicted RBP22.7■■□□□ 1.22
PCNP-201ENST00000265260 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
PCNP-201ENST00000265260 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
PCNP-201ENST00000265260 KDM5BQ9UGL1 1544 aa22.67■■□□□ 1.22
PCNP-201ENST00000265260 NBR1Q14596 966 aa22.66■■□□□ 1.22
PCNP-201ENST00000265260 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
PCNP-201ENST00000265260 ZBED9Q6R2W3 1325 aa22.64■■□□□ 1.21
PCNP-201ENST00000265260 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
PCNP-201ENST00000265260 IPO9Q96P70 1041 aaKnown RBP22.61■■□□□ 1.21
PCNP-201ENST00000265260 WASHC2AQ641Q2 1341 aa22.61■■□□□ 1.21
PCNP-201ENST00000265260 CCDC18Q5T9S5 1454 aa22.58■■□□□ 1.21
PCNP-201ENST00000265260 CNTLNQ9NXG0 1405 aa22.58■■□□□ 1.21
PCNP-201ENST00000265260 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
PCNP-201ENST00000265260 PCF11O94913 1555 aaKnown RBP22.57■■□□□ 1.2
PCNP-201ENST00000265260 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
PCNP-201ENST00000265260 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
PCNP-201ENST00000265260 HFM1A2PYH4 1435 aa22.56■■□□□ 1.2
PCNP-201ENST00000265260 IGF1RP08069 1367 aa22.55■■□□□ 1.2
PCNP-201ENST00000265260 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
PCNP-201ENST00000265260 CCDC184Q52MB2 194 aa22.54■■□□□ 1.2
PCNP-201ENST00000265260 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
PCNP-201ENST00000265260 HSPA5P11021 654 aaKnown RBP22.52■■□□□ 1.2
PCNP-201ENST00000265260 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.2
PCNP-201ENST00000265260 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
PCNP-201ENST00000265260 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
PCNP-201ENST00000265260 RNF123Q5XPI4 1314 aa22.5■■□□□ 1.19
PCNP-201ENST00000265260 FYCO1Q9BQS8 1478 aa22.49■■□□□ 1.19
PCNP-201ENST00000265260 FGD6Q6ZV73 1430 aa22.48■■□□□ 1.19
PCNP-201ENST00000265260 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
PCNP-201ENST00000265260 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
PCNP-201ENST00000265260 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.197e-14■■■■□ 21.5
PCNP-201ENST00000265260 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
PCNP-201ENST00000265260 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
PCNP-201ENST00000265260 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.184e-6■■■□□ 16
PCNP-201ENST00000265260 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
PCNP-201ENST00000265260 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
PCNP-201ENST00000265260 NAIPQ13075 1403 aa22.43■■□□□ 1.18
PCNP-201ENST00000265260 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
PCNP-201ENST00000265260 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
PCNP-201ENST00000265260 IL27Q8NEV9 243 aa22.42■■□□□ 1.18
PCNP-201ENST00000265260 CFTRP13569 1480 aa22.42■■□□□ 1.18
PCNP-201ENST00000265260 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
PCNP-201ENST00000265260 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
PCNP-201ENST00000265260 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
PCNP-201ENST00000265260 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
PCNP-201ENST00000265260 C11orf95C9JLR9 678 aaPredicted RBP22.39■■□□□ 1.17
PCNP-201ENST00000265260 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
PCNP-201ENST00000265260 CCDC136Q96JN2 1154 aa22.37■■□□□ 1.17
PCNP-201ENST00000265260 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
PCNP-201ENST00000265260 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
PCNP-201ENST00000265260 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
PCNP-201ENST00000265260 AKNAQ7Z591 1439 aa22.35■■□□□ 1.17
PCNP-201ENST00000265260 WASHC2CQ9Y4E1 1318 aa22.35■■□□□ 1.17
PCNP-201ENST00000265260 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
PCNP-201ENST00000265260 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
PCNP-201ENST00000265260 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
PCNP-201ENST00000265260 POLR1AO95602 1720 aaPredicted RBP22.31■■□□□ 1.16
PCNP-201ENST00000265260 FHOD3Q2V2M9 1422 aa22.3■■□□□ 1.16
PCNP-201ENST00000265260 DENND4BO75064 1496 aaPredicted RBP22.29■■□□□ 1.16
PCNP-201ENST00000265260 UBE2Q2Q8WVN8 375 aa22.28■■□□□ 1.16
PCNP-201ENST00000265260 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
PCNP-201ENST00000265260 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
PCNP-201ENST00000265260 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
PCNP-201ENST00000265260 P3H3Q8IVL6 736 aa22.24■■□□□ 1.15
PCNP-201ENST00000265260 MYOM3Q5VTT5 1437 aa22.24■■□□□ 1.15
PCNP-201ENST00000265260 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
PCNP-201ENST00000265260 SPATA31E1Q6ZUB1 1445 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms