RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
PCNP-201ENST00000265260 HRCP23327 699 aa28.04■■■□□ 2.08
PCNP-201ENST00000265260 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
PCNP-201ENST00000265260 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
PCNP-201ENST00000265260 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.96
PCNP-201ENST00000265260 PCGF6Q9BYE7 350 aa27.24■■□□□ 1.95
PCNP-201ENST00000265260 PELP1Q8IZL8 1130 aaKnown RBP27.23■■□□□ 1.95
PCNP-201ENST00000265260 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
PCNP-201ENST00000265260 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
PCNP-201ENST00000265260 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
PCNP-201ENST00000265260 ZCCHC6Q5VYS8 1495 aaKnown RBP26.83■■□□□ 1.88
PCNP-201ENST00000265260 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
PCNP-201ENST00000265260 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
PCNP-201ENST00000265260 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
PCNP-201ENST00000265260 SCAF1Q9H7N4 1312 aaKnown RBP26.43■■□□□ 1.82
PCNP-201ENST00000265260 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
PCNP-201ENST00000265260 ABCC9O60706 1549 aa26.31■■□□□ 1.8
PCNP-201ENST00000265260 MYT1Q01538 1121 aa26.25■■□□□ 1.79
PCNP-201ENST00000265260 ACIN1Q9UKV3 1341 aaKnown RBP25.87■■□□□ 1.73
PCNP-201ENST00000265260 NEUROD1Q13562 356 aa25.69■■□□□ 1.7
PCNP-201ENST00000265260 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
PCNP-201ENST00000265260 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
PCNP-201ENST00000265260 CENPBP07199 599 aaPredicted RBP25.53■■□□□ 1.68
PCNP-201ENST00000265260 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
PCNP-201ENST00000265260 DIEXFQ68CQ4 756 aaKnown RBP25.35■■□□□ 1.65
PCNP-201ENST00000265260 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
PCNP-201ENST00000265260 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
PCNP-201ENST00000265260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.23■■□□□ 1.63
PCNP-201ENST00000265260 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
PCNP-201ENST00000265260 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
PCNP-201ENST00000265260 NACADO15069 1562 aa25.02■■□□□ 1.6
PCNP-201ENST00000265260 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
PCNP-201ENST00000265260 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
PCNP-201ENST00000265260 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
PCNP-201ENST00000265260 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
PCNP-201ENST00000265260 PABPN1Q86U42 306 aaKnown RBP eCLIP24.73■■□□□ 1.55
PCNP-201ENST00000265260 YTHDC1Q96MU7 727 aaKnown RBP24.69■■□□□ 1.54
PCNP-201ENST00000265260 MIER1Q8N108 512 aa24.67■■□□□ 1.54
PCNP-201ENST00000265260 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
PCNP-201ENST00000265260 CLSPNQ9HAW4 1339 aa24.63■■□□□ 1.53
PCNP-201ENST00000265260 EIF4G1Q04637 1599 aaKnown RBP24.59■■□□□ 1.53
PCNP-201ENST00000265260 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
PCNP-201ENST00000265260 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
PCNP-201ENST00000265260 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
PCNP-201ENST00000265260 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
PCNP-201ENST00000265260 CECR2Q9BXF3 1484 aa24.46■■□□□ 1.51
PCNP-201ENST00000265260 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
PCNP-201ENST00000265260 WIZO95785 1651 aa24.4■■□□□ 1.5
PCNP-201ENST00000265260 ANP32EQ9BTT0 268 aa24.39■■□□□ 1.5
PCNP-201ENST00000265260 SUPT16HQ9Y5B9 1047 aaKnown RBP24.38■■□□□ 1.49
PCNP-201ENST00000265260 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
PCNP-201ENST00000265260 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
PCNP-201ENST00000265260 EEA1Q15075 1411 aa24.29■■□□□ 1.48
PCNP-201ENST00000265260 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
PCNP-201ENST00000265260 BCL11AQ9H165 835 aa24.27■■□□□ 1.48
PCNP-201ENST00000265260 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
PCNP-201ENST00000265260 SOGA1O94964 1423 aa24.17■■□□□ 1.46
PCNP-201ENST00000265260 DNAJC5BQ9UF47 199 aa24.16■■□□□ 1.46
PCNP-201ENST00000265260 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
PCNP-201ENST00000265260 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
PCNP-201ENST00000265260 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
PCNP-201ENST00000265260 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
PCNP-201ENST00000265260 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
PCNP-201ENST00000265260 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
PCNP-201ENST00000265260 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
PCNP-201ENST00000265260 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
PCNP-201ENST00000265260 KIF21BO75037 1637 aa23.91■■□□□ 1.42
PCNP-201ENST00000265260 DHX57Q6P158 1386 aaKnown RBP23.9■■□□□ 1.42
PCNP-201ENST00000265260 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
PCNP-201ENST00000265260 CLIP1P30622 1438 aa23.88■■□□□ 1.41
PCNP-201ENST00000265260 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
PCNP-201ENST00000265260 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
PCNP-201ENST00000265260 APLP2Q06481 763 aa23.75■■□□□ 1.39
PCNP-201ENST00000265260 RBM19Q9Y4C8 960 aaKnown RBP23.71■■□□□ 1.39
PCNP-201ENST00000265260 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
PCNP-201ENST00000265260 CUX2O14529 1486 aa23.65■■□□□ 1.38
PCNP-201ENST00000265260 FKBP8Q14318 412 aa23.65■■□□□ 1.38
PCNP-201ENST00000265260 BCANQ96GW7 911 aa23.61■■□□□ 1.37
PCNP-201ENST00000265260 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
PCNP-201ENST00000265260 RRBP1Q9P2E9 1410 aaKnown RBP23.56■■□□□ 1.36
PCNP-201ENST00000265260 SYNJ1O43426 1573 aa23.55■■□□□ 1.36
PCNP-201ENST00000265260 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
PCNP-201ENST00000265260 NEFLP07196 543 aa23.5■■□□□ 1.35
PCNP-201ENST00000265260 MSH5O43196 834 aa23.48■■□□□ 1.35
PCNP-201ENST00000265260 FANCIQ9NVI1 1328 aa23.46■■□□□ 1.35
PCNP-201ENST00000265260 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
PCNP-201ENST00000265260 CCER2I3L3R5 266 aa23.39■■□□□ 1.34
PCNP-201ENST00000265260 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
PCNP-201ENST00000265260 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
PCNP-201ENST00000265260 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
PCNP-201ENST00000265260 MYT1LQ9UL68 1186 aa23.36■■□□□ 1.33
PCNP-201ENST00000265260 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
PCNP-201ENST00000265260 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
PCNP-201ENST00000265260 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
PCNP-201ENST00000265260 ITGAEP38570 1179 aa23.3■■□□□ 1.32
PCNP-201ENST00000265260 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
PCNP-201ENST00000265260 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
PCNP-201ENST00000265260 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
PCNP-201ENST00000265260 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
PCNP-201ENST00000265260 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms