RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
GTF3C3-201ENST00000263956 FHAD1B1AJZ9 1412 aa12.23□□□□□ -0.45
GTF3C3-201ENST00000263956 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
GTF3C3-201ENST00000263956 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.46
GTF3C3-201ENST00000263956 ABCA10Q8WWZ4 1543 aa12.18□□□□□ -0.46
GTF3C3-201ENST00000263956 TRIM52Q96A61 297 aa12.17□□□□□ -0.46
GTF3C3-201ENST00000263956 FMN1Q68DA7 1419 aa12.15□□□□□ -0.46
GTF3C3-201ENST00000263956 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
GTF3C3-201ENST00000263956 TSPY4P0CV99 314 aa12.11□□□□□ -0.47
GTF3C3-201ENST00000263956 TSPY10P0CW01 314 aa12.11□□□□□ -0.47
GTF3C3-201ENST00000263956 PTPRGP23470 1445 aa12.1□□□□□ -0.47
GTF3C3-201ENST00000263956 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
GTF3C3-201ENST00000263956 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
GTF3C3-201ENST00000263956 CFDP1Q9UEE9 299 aaPredicted RBP12.08□□□□□ -0.47
GTF3C3-201ENST00000263956 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
GTF3C3-201ENST00000263956 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
GTF3C3-201ENST00000263956 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
GTF3C3-201ENST00000263956 CYB5RLQ6IPT4 315 aa12.07□□□□□ -0.48
GTF3C3-201ENST00000263956 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
GTF3C3-201ENST00000263956 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
GTF3C3-201ENST00000263956 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
GTF3C3-201ENST00000263956 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
GTF3C3-201ENST00000263956 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
GTF3C3-201ENST00000263956 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
GTF3C3-201ENST00000263956 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
GTF3C3-201ENST00000263956 WDR62O43379 1518 aa12.03□□□□□ -0.48
GTF3C3-201ENST00000263956 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
GTF3C3-201ENST00000263956 KIF21BO75037 1637 aa12.03□□□□□ -0.48
GTF3C3-201ENST00000263956 PRG4Q92954 1404 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-201ENST00000263956 KIAA0586Q9BVV6 1533 aa11.99□□□□□ -0.49
GTF3C3-201ENST00000263956 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
GTF3C3-201ENST00000263956 CUL7Q14999 1698 aa11.98□□□□□ -0.49
GTF3C3-201ENST00000263956 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
GTF3C3-201ENST00000263956 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.5
GTF3C3-201ENST00000263956 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
GTF3C3-201ENST00000263956 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
GTF3C3-201ENST00000263956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.51e-7■■■■□ 21.9
GTF3C3-201ENST00000263956 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
GTF3C3-201ENST00000263956 CCDC18Q5T9S5 1454 aa11.92□□□□□ -0.5
GTF3C3-201ENST00000263956 ARHGAP35Q9NRY4 1499 aa11.92□□□□□ -0.5
GTF3C3-201ENST00000263956 EFCAB5A4FU69 1503 aa11.91□□□□□ -0.5
GTF3C3-201ENST00000263956 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.51
GTF3C3-201ENST00000263956 IQGAP2Q13576 1575 aa11.89□□□□□ -0.51
GTF3C3-201ENST00000263956 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
GTF3C3-201ENST00000263956 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
GTF3C3-201ENST00000263956 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
GTF3C3-201ENST00000263956 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
GTF3C3-201ENST00000263956 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
GTF3C3-201ENST00000263956 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
GTF3C3-201ENST00000263956 ZNF326Q5BKZ1 582 aaKnown RBP11.84□□□□□ -0.51
GTF3C3-201ENST00000263956 HRCP23327 699 aa11.83□□□□□ -0.51
GTF3C3-201ENST00000263956 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.51
GTF3C3-201ENST00000263956 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
GTF3C3-201ENST00000263956 FAM69CQ0P6D2 419 aa11.83□□□□□ -0.52
GTF3C3-201ENST00000263956 WDR97A6NE52 1622 aa11.83□□□□□ -0.52
GTF3C3-201ENST00000263956 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
GTF3C3-201ENST00000263956 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-201ENST00000263956 UACAQ9BZF9 1416 aa11.82□□□□□ -0.52
GTF3C3-201ENST00000263956 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-201ENST00000263956 BCANQ96GW7 911 aa11.82□□□□□ -0.52
GTF3C3-201ENST00000263956 POLR3GLQ9BT43 218 aa11.81□□□□□ -0.52
GTF3C3-201ENST00000263956 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
GTF3C3-201ENST00000263956 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
GTF3C3-201ENST00000263956 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
GTF3C3-201ENST00000263956 ABCA5Q8WWZ7 1642 aa11.79□□□□□ -0.52
GTF3C3-201ENST00000263956 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.52
GTF3C3-201ENST00000263956 NUP160Q12769 1436 aa11.75□□□□□ -0.53
GTF3C3-201ENST00000263956 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
GTF3C3-201ENST00000263956 ANKRD30AQ9BXX3 1397 aa11.75□□□□□ -0.53
GTF3C3-201ENST00000263956 KANK1Q14678 1352 aa11.74□□□□□ -0.53
GTF3C3-201ENST00000263956 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
GTF3C3-201ENST00000263956 PBRM1Q86U86 1689 aa11.73□□□□□ -0.53
GTF3C3-201ENST00000263956 HECW1Q76N89 1606 aa11.73□□□□□ -0.53
GTF3C3-201ENST00000263956 MLECQ14165 292 aa11.73□□□□□ -0.53
GTF3C3-201ENST00000263956 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
GTF3C3-201ENST00000263956 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-201ENST00000263956 GGT6Q6P531 493 aa11.72□□□□□ -0.53
GTF3C3-201ENST00000263956 MYOM3Q5VTT5 1437 aa11.7□□□□□ -0.54
GTF3C3-201ENST00000263956 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
GTF3C3-201ENST00000263956 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
GTF3C3-201ENST00000263956 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
GTF3C3-201ENST00000263956 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
GTF3C3-201ENST00000263956 KIF3BO15066 747 aa11.69□□□□□ -0.54
GTF3C3-201ENST00000263956 FGD6Q6ZV73 1430 aa11.67□□□□□ -0.54
GTF3C3-201ENST00000263956 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
GTF3C3-201ENST00000263956 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
GTF3C3-201ENST00000263956 CDK13Q14004 1512 aaKnown RBP11.66□□□□□ -0.54
GTF3C3-201ENST00000263956 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
GTF3C3-201ENST00000263956 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
GTF3C3-201ENST00000263956 ARHGAP5Q13017 1502 aa11.64□□□□□ -0.55
GTF3C3-201ENST00000263956 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
GTF3C3-201ENST00000263956 CTTNBP2Q8WZ74 1663 aa11.64□□□□□ -0.55
GTF3C3-201ENST00000263956 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
GTF3C3-201ENST00000263956 NUP155O75694 1391 aa11.63□□□□□ -0.55
GTF3C3-201ENST00000263956 PCF11O94913 1555 aaKnown RBP11.63□□□□□ -0.55
GTF3C3-201ENST00000263956 RGL3Q3MIN7 710 aa11.63□□□□□ -0.55
GTF3C3-201ENST00000263956 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
GTF3C3-201ENST00000263956 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
GTF3C3-201ENST00000263956 PKD2Q13563 968 aa11.61□□□□□ -0.55
GTF3C3-201ENST00000263956 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms