RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
USE1-201ENST00000263897 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
USE1-201ENST00000263897 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
USE1-201ENST00000263897 KIAA0586Q9BVV6 1533 aa27.51■■□□□ 1.99
USE1-201ENST00000263897 RAPGEF2Q9Y4G8 1499 aa27.33■■□□□ 1.97
USE1-201ENST00000263897 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
USE1-201ENST00000263897 CARMIL2Q6F5E8 1435 aa27.23■■□□□ 1.95
USE1-201ENST00000263897 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
USE1-201ENST00000263897 PTPRGP23470 1445 aa27.21■■□□□ 1.95
USE1-201ENST00000263897 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
USE1-201ENST00000263897 ADCY10Q96PN6 1610 aa27.15■■□□□ 1.94
USE1-201ENST00000263897 TTBK1Q5TCY1 1321 aaPredicted RBP27.15■■□□□ 1.94
USE1-201ENST00000263897 PRXQ9BXM0 1461 aa27.14■■□□□ 1.94
USE1-201ENST00000263897 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
USE1-201ENST00000263897 UGGT2Q9NYU1 1516 aa27.11■■□□□ 1.93
USE1-201ENST00000263897 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
USE1-201ENST00000263897 MAPKBP1O60336 1514 aa27.06■■□□□ 1.92
USE1-201ENST00000263897 KIF13AQ9H1H9 1805 aa27.04■■□□□ 1.92
USE1-201ENST00000263897 CTTNBP2Q8WZ74 1663 aa27.03■■□□□ 1.92
USE1-201ENST00000263897 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
USE1-201ENST00000263897 ABCC10Q5T3U5 1492 aa27.01■■□□□ 1.91
USE1-201ENST00000263897 UACAQ9BZF9 1416 aa26.99■■□□□ 1.91
USE1-201ENST00000263897 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
USE1-201ENST00000263897 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
USE1-201ENST00000263897 EEA1Q15075 1411 aa26.98■■□□□ 1.91
USE1-201ENST00000263897 ABCC2Q92887 1545 aa26.97■■□□□ 1.91
USE1-201ENST00000263897 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
USE1-201ENST00000263897 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
USE1-201ENST00000263897 DIP2BQ9P265 1576 aa26.91■■□□□ 1.9
USE1-201ENST00000263897 FAM9AQ8IZU1 332 aaPredicted RBP26.9■■□□□ 1.9
USE1-201ENST00000263897 ASXL2Q76L83 1435 aa26.85■■□□□ 1.89
USE1-201ENST00000263897 KDM5BQ9UGL1 1544 aa26.85■■□□□ 1.89
USE1-201ENST00000263897 PLB1Q6P1J6 1458 aa26.84■■□□□ 1.89
USE1-201ENST00000263897 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
USE1-201ENST00000263897 ZCCHC11Q5TAX3 1644 aaKnown RBP26.75■■□□□ 1.87
USE1-201ENST00000263897 ABCA8O94911 1581 aa26.74■■□□□ 1.87
USE1-201ENST00000263897 TSPOAP1O95153 1857 aa26.73■■□□□ 1.87
USE1-201ENST00000263897 GLI2P10070 1586 aa26.72■■□□□ 1.87
USE1-201ENST00000263897 KIF21BO75037 1637 aa26.69■■□□□ 1.86
USE1-201ENST00000263897 SAMD9Q5K651 1589 aa26.68■■□□□ 1.86
USE1-201ENST00000263897 EPRSP07814 1512 aaKnown RBP26.68■■□□□ 1.86
USE1-201ENST00000263897 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
USE1-201ENST00000263897 WDR7Q9Y4E6 1490 aa26.62■■□□□ 1.85
USE1-201ENST00000263897 KDM6BO15054 1643 aa26.59■■□□□ 1.85
USE1-201ENST00000263897 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
USE1-201ENST00000263897 KCNH8Q96L42 1107 aa26.58■■□□□ 1.85
USE1-201ENST00000263897 PPRC1Q5VV67 1664 aaKnown RBP26.57■■□□□ 1.84
USE1-201ENST00000263897 EHMT2Q96KQ7 1210 aa26.57■■□□□ 1.84
USE1-201ENST00000263897 MAP3K4Q9Y6R4 1608 aa26.57■■□□□ 1.84
USE1-201ENST00000263897 ATP10BO94823 1461 aa26.56■■□□□ 1.84
USE1-201ENST00000263897 ARID3CA6NKF2 412 aa26.56■■□□□ 1.84
USE1-201ENST00000263897 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
USE1-201ENST00000263897 RAPGEF6Q8TEU7 1601 aa26.51■■□□□ 1.83
USE1-201ENST00000263897 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
USE1-201ENST00000263897 EFCAB5A4FU69 1503 aa26.49■■□□□ 1.83
USE1-201ENST00000263897 TEX14Q8IWB6 1497 aa26.49■■□□□ 1.83
USE1-201ENST00000263897 CD109Q6YHK3 1445 aa26.47■■□□□ 1.83
USE1-201ENST00000263897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
USE1-201ENST00000263897 HNRNPUL2Q1KMD3 747 aaKnown RBP26.45■■□□□ 1.82
USE1-201ENST00000263897 NUP153P49790 1475 aaKnown RBP26.43■■□□□ 1.82
USE1-201ENST00000263897 COL17A1Q9UMD9 1497 aaPredicted RBP26.43■■□□□ 1.82
USE1-201ENST00000263897 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
USE1-201ENST00000263897 MAGI3Q5TCQ9 1506 aa26.41■■□□□ 1.82
USE1-201ENST00000263897 PLEKHD1A6NEE1 506 aa26.35■■□□□ 1.81
USE1-201ENST00000263897 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
USE1-201ENST00000263897 ABCA9Q8IUA7 1624 aa26.3■■□□□ 1.8
USE1-201ENST00000263897 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
USE1-201ENST00000263897 KDM4FA0A1W2PPD8 638 aa26.25■■□□□ 1.79
USE1-201ENST00000263897 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
USE1-201ENST00000263897 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
USE1-201ENST00000263897 ARAP3Q8WWN8 1544 aa26.21■■□□□ 1.79
USE1-201ENST00000263897 CDK13Q14004 1512 aaKnown RBP26.19■■□□□ 1.78
USE1-201ENST00000263897 HECW1Q76N89 1606 aa26.16■■□□□ 1.78
USE1-201ENST00000263897 NEO1Q92859 1461 aa26.16■■□□□ 1.78
USE1-201ENST00000263897 CDK11AQ9UQ88 783 aaPredicted RBP26.14■■□□□ 1.78
USE1-201ENST00000263897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.12■■□□□ 1.77
USE1-201ENST00000263897 RAPGEF3O95398 923 aa26.1■■□□□ 1.77
USE1-201ENST00000263897 CLIP1P30622 1438 aa26.06■■□□□ 1.76
USE1-201ENST00000263897 ADGRL1O94910 1474 aa26.06■■□□□ 1.76
USE1-201ENST00000263897 TTC37Q6PGP7 1564 aa26.05■■□□□ 1.76
USE1-201ENST00000263897 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
USE1-201ENST00000263897 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
USE1-201ENST00000263897 FANCAO15360 1455 aa26.04■■□□□ 1.76
USE1-201ENST00000263897 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
USE1-201ENST00000263897 PLCH2O75038 1416 aa26.01■■□□□ 1.75
USE1-201ENST00000263897 TROQ12816 1431 aaPredicted RBP26■■□□□ 1.75
USE1-201ENST00000263897 DENND4BO75064 1496 aaPredicted RBP25.98■■□□□ 1.75
USE1-201ENST00000263897 PCF11O94913 1555 aaKnown RBP25.97■■□□□ 1.75
USE1-201ENST00000263897 CFAP74Q9C0B2 1584 aa25.97■■□□□ 1.75
USE1-201ENST00000263897 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.74
USE1-201ENST00000263897 FRMPD1Q5SYB0 1578 aa25.95■■□□□ 1.74
USE1-201ENST00000263897 EFCAB2Q5VUJ9 269 aa25.94■■□□□ 1.74
USE1-201ENST00000263897 KIF14Q15058 1648 aa25.93■■□□□ 1.74
USE1-201ENST00000263897 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
USE1-201ENST00000263897 RICTORQ6R327 1708 aa25.9■■□□□ 1.74
USE1-201ENST00000263897 MYO5CQ9NQX4 1742 aa25.89■■□□□ 1.74
USE1-201ENST00000263897 SCAPERQ9BY12 1400 aa25.88■■□□□ 1.73
USE1-201ENST00000263897 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
USE1-201ENST00000263897 LOC105371045A0A1W2PR82 267 aa25.83■■□□□ 1.73
USE1-201ENST00000263897 ARHGAP5Q13017 1502 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms