RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
ITCH-201ENST00000262650 TAOK2Q9UL54 1235 aa9.3□□□□□ -0.92
ITCH-201ENST00000262650 SYNJ2O15056 1496 aa9.29□□□□□ -0.92
ITCH-201ENST00000262650 SNAPC4Q5SXM2 1469 aa9.29□□□□□ -0.92
ITCH-201ENST00000262650 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
ITCH-201ENST00000262650 SHROOM2Q13796 1616 aa9.27□□□□□ -0.93
ITCH-201ENST00000262650 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
ITCH-201ENST00000262650 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
ITCH-201ENST00000262650 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
ITCH-201ENST00000262650 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
ITCH-201ENST00000262650 NUP160Q12769 1436 aa9.21□□□□□ -0.93
ITCH-201ENST00000262650 CEP170Q5SW79 1584 aa9.19□□□□□ -0.94
ITCH-201ENST00000262650 GRIN2AQ12879 1464 aa9.19□□□□□ -0.94
ITCH-201ENST00000262650 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
ITCH-201ENST00000262650 FHAD1B1AJZ9 1412 aa9.16□□□□□ -0.94
ITCH-201ENST00000262650 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
ITCH-201ENST00000262650 CYB5RLQ6IPT4 315 aa9.14□□□□□ -0.95
ITCH-201ENST00000262650 CHMP7Q8WUX9 453 aaPredicted RBP9.13□□□□□ -0.95
ITCH-201ENST00000262650 ERCC6L2Q5T890 1561 aa9.12□□□□□ -0.95
ITCH-201ENST00000262650 BCANQ96GW7 911 aa9.12□□□□□ -0.95
ITCH-201ENST00000262650 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
ITCH-201ENST00000262650 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
ITCH-201ENST00000262650 KIF13AQ9H1H9 1805 aa9.12□□□□□ -0.95
ITCH-201ENST00000262650 CUL7Q14999 1698 aa9.1□□□□□ -0.95
ITCH-201ENST00000262650 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
ITCH-201ENST00000262650 FBLN2P98095 1184 aa9.09□□□□□ -0.95
ITCH-201ENST00000262650 PHF23Q9BUL5 403 aaPredicted RBP9.09□□□□□ -0.95
ITCH-201ENST00000262650 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
ITCH-201ENST00000262650 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
ITCH-201ENST00000262650 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
ITCH-201ENST00000262650 KIAA0586Q9BVV6 1533 aa9.02□□□□□ -0.97
ITCH-201ENST00000262650 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.97
ITCH-201ENST00000262650 PRG4Q92954 1404 aaPredicted RBP9□□□□□ -0.97
ITCH-201ENST00000262650 DIP2BQ9P265 1576 aa8.99□□□□□ -0.97
ITCH-201ENST00000262650 IGF1RP08069 1367 aa8.99□□□□□ -0.97
ITCH-201ENST00000262650 ABCC10Q5T3U5 1492 aa8.98□□□□□ -0.97
ITCH-201ENST00000262650 NPM2Q86SE8 214 aaKnown RBP8.98□□□□□ -0.97
ITCH-201ENST00000262650 TRHP20396 242 aaPredicted RBP8.98□□□□□ -0.97
ITCH-201ENST00000262650 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
ITCH-201ENST00000262650 GLI2P10070 1586 aa8.96□□□□□ -0.97
ITCH-201ENST00000262650 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.98
ITCH-201ENST00000262650 UHRF1BP1LA0JNW5 1464 aa8.96□□□□□ -0.98
ITCH-201ENST00000262650 JPH4Q96JJ6 628 aa8.96□□□□□ -0.98
ITCH-201ENST00000262650 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
ITCH-201ENST00000262650 IQGAP2Q13576 1575 aa8.93□□□□□ -0.98
ITCH-201ENST00000262650 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
ITCH-201ENST00000262650 UGGT2Q9NYU1 1516 aa8.93□□□□□ -0.98
ITCH-201ENST00000262650 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
ITCH-201ENST00000262650 DISP1Q96F81 1524 aa8.9□□□□□ -0.99
ITCH-201ENST00000262650 ABCC2Q92887 1545 aa8.89□□□□□ -0.99
ITCH-201ENST00000262650 MAP3K4Q9Y6R4 1608 aa8.89□□□□□ -0.99
ITCH-201ENST00000262650 CARMIL1Q5VZK9 1371 aa8.89□□□□□ -0.99
ITCH-201ENST00000262650 KDM5BQ9UGL1 1544 aa8.87□□□□□ -0.99
ITCH-201ENST00000262650 TNIKQ9UKE5 1360 aa8.87□□□□□ -0.99
ITCH-201ENST00000262650 KIAA0556O60303 1618 aa8.87□□□□□ -0.99
ITCH-201ENST00000262650 FAM9AQ8IZU1 332 aaPredicted RBP8.86□□□□□ -0.99
ITCH-201ENST00000262650 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
ITCH-201ENST00000262650 CARMIL2Q6F5E8 1435 aa8.86□□□□□ -0.99
ITCH-201ENST00000262650 KDM6BO15054 1643 aa8.86□□□□□ -0.99
ITCH-201ENST00000262650 PLB1Q6P1J6 1458 aa8.86□□□□□ -0.99
ITCH-201ENST00000262650 RAPGEF2Q9Y4G8 1499 aa8.85□□□□□ -0.99
ITCH-201ENST00000262650 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
ITCH-201ENST00000262650 ZCCHC11Q5TAX3 1644 aaKnown RBP8.85□□□□□ -0.99
ITCH-201ENST00000262650 PTPRGP23470 1445 aa8.84□□□□□ -0.99
ITCH-201ENST00000262650 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
ITCH-201ENST00000262650 TSPOAP1O95153 1857 aa8.83□□□□□ -1
ITCH-201ENST00000262650 UACAQ9BZF9 1416 aa8.83□□□□□ -1
ITCH-201ENST00000262650 ABCA8O94911 1581 aa8.82□□□□□ -1
ITCH-201ENST00000262650 CFAP43Q8NDM7 1665 aa8.82□□□□□ -1
ITCH-201ENST00000262650 EPRSP07814 1512 aaKnown RBP8.81□□□□□ -1
ITCH-201ENST00000262650 ASXL2Q76L83 1435 aa8.8□□□□□ -1
ITCH-201ENST00000262650 PRXQ9BXM0 1461 aa8.8□□□□□ -1
ITCH-201ENST00000262650 NPM1P06748 294 aaKnown RBP eCLIP8.79□□□□□ -1
ITCH-201ENST00000262650 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ITCH-201ENST00000262650 GOLGA3Q08378 1498 aa8.78□□□□□ -1
ITCH-201ENST00000262650 SAMD9Q5K651 1589 aa8.77□□□□□ -1
ITCH-201ENST00000262650 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
ITCH-201ENST00000262650 MAGI3Q5TCQ9 1506 aa8.77□□□□□ -1.01
ITCH-201ENST00000262650 TEX14Q8IWB6 1497 aa8.77□□□□□ -1.01
ITCH-201ENST00000262650 LOC105371045A0A1W2PR82 267 aa8.76□□□□□ -1.01
ITCH-201ENST00000262650 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
ITCH-201ENST00000262650 WDR7Q9Y4E6 1490 aa8.75□□□□□ -1.01
ITCH-201ENST00000262650 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
ITCH-201ENST00000262650 ABCA9Q8IUA7 1624 aa8.73□□□□□ -1.01
ITCH-201ENST00000262650 SLC4A1APQ9BWU0 796 aaKnown RBP8.73□□□□□ -1.01
ITCH-201ENST00000262650 COL17A1Q9UMD9 1497 aaPredicted RBP8.72□□□□□ -1.01
ITCH-201ENST00000262650 ARAP3Q8WWN8 1544 aa8.71□□□□□ -1.01
ITCH-201ENST00000262650 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.01
ITCH-201ENST00000262650 UBE2Q2Q8WVN8 375 aa8.69□□□□□ -1.02
ITCH-201ENST00000262650 EEA1Q15075 1411 aa8.68□□□□□ -1.02
ITCH-201ENST00000262650 RAPGEF6Q8TEU7 1601 aa8.68□□□□□ -1.02
ITCH-201ENST00000262650 PHLDB1Q86UU1 1377 aa8.68□□□□□ -1.02
ITCH-201ENST00000262650 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
ITCH-201ENST00000262650 KIF21BO75037 1637 aa8.67□□□□□ -1.02
ITCH-201ENST00000262650 ATP10BO94823 1461 aa8.66□□□□□ -1.02
ITCH-201ENST00000262650 HRCP23327 699 aa8.65□□□□□ -1.02
ITCH-201ENST00000262650 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.02
ITCH-201ENST00000262650 FRMPD1Q5SYB0 1578 aa8.64□□□□□ -1.03
ITCH-201ENST00000262650 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
ITCH-201ENST00000262650 NEO1Q92859 1461 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms