RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 NISCHQ9Y2I1 1504 aa12.99□□□□□ -0.33
ITCH-201ENST00000262650 CCDC180Q9P1Z9 1646 aa11.83□□□□□ -0.52
ITCH-201ENST00000262650 ABCC9O60706 1549 aa11.51□□□□□ -0.57
ITCH-201ENST00000262650 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
ITCH-201ENST00000262650 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
ITCH-201ENST00000262650 NACADO15069 1562 aa11.1□□□□□ -0.63
ITCH-201ENST00000262650 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
ITCH-201ENST00000262650 UNC13AQ9UPW8 1703 aa10.98□□□□□ -0.65
ITCH-201ENST00000262650 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
ITCH-201ENST00000262650 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
ITCH-201ENST00000262650 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
ITCH-201ENST00000262650 DNAJC5BQ9UF47 199 aa10.82□□□□□ -0.68
ITCH-201ENST00000262650 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
ITCH-201ENST00000262650 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
ITCH-201ENST00000262650 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
ITCH-201ENST00000262650 SCRIBQ14160 1630 aa10.53□□□□□ -0.72
ITCH-201ENST00000262650 EIF4G1Q04637 1599 aaKnown RBP10.53□□□□□ -0.72
ITCH-201ENST00000262650 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.72
ITCH-201ENST00000262650 CECR2Q9BXF3 1484 aa10.44□□□□□ -0.74
ITCH-201ENST00000262650 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
ITCH-201ENST00000262650 AEBP2Q6ZN18 517 aaPredicted RBP10.33□□□□□ -0.76
ITCH-201ENST00000262650 MYT1Q01538 1121 aa10.28□□□□□ -0.76
ITCH-201ENST00000262650 TTBK1Q5TCY1 1321 aaPredicted RBP10.26□□□□□ -0.77
ITCH-201ENST00000262650 NCAPD3P42695 1498 aa10.21□□□□□ -0.77
ITCH-201ENST00000262650 HMGXB3Q12766 1538 aa10.18□□□□□ -0.78
ITCH-201ENST00000262650 PEG3Q9GZU2 1588 aa10.17□□□□□ -0.78
ITCH-201ENST00000262650 SMARCA4P51532 1647 aa10.16□□□□□ -0.78
ITCH-201ENST00000262650 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
ITCH-201ENST00000262650 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
ITCH-201ENST00000262650 CUX2O14529 1486 aa10.13□□□□□ -0.79
ITCH-201ENST00000262650 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
ITCH-201ENST00000262650 APLP2Q06481 763 aa10.11□□□□□ -0.79
ITCH-201ENST00000262650 PELP1Q8IZL8 1130 aaKnown RBP10.1□□□□□ -0.79
ITCH-201ENST00000262650 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
ITCH-201ENST00000262650 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
ITCH-201ENST00000262650 EHMT2Q96KQ7 1210 aa10.06□□□□□ -0.8
ITCH-201ENST00000262650 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
ITCH-201ENST00000262650 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
ITCH-201ENST00000262650 LAMC3Q9Y6N6 1575 aa10.01□□□□□ -0.81
ITCH-201ENST00000262650 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
ITCH-201ENST00000262650 BAZ1BQ9UIG0 1483 aaKnown RBP9.97□□□□□ -0.81
ITCH-201ENST00000262650 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
ITCH-201ENST00000262650 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
ITCH-201ENST00000262650 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
ITCH-201ENST00000262650 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
ITCH-201ENST00000262650 ERCC6Q03468 1493 aa9.93□□□□□ -0.82
ITCH-201ENST00000262650 KIF21AQ7Z4S6 1674 aa9.92□□□□□ -0.82
ITCH-201ENST00000262650 NESP48681 1621 aa9.92□□□□□ -0.82
ITCH-201ENST00000262650 WDR62O43379 1518 aa9.85□□□□□ -0.83
ITCH-201ENST00000262650 WIZO95785 1651 aa9.84□□□□□ -0.83
ITCH-201ENST00000262650 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
ITCH-201ENST00000262650 PRDM2Q13029 1718 aa9.83□□□□□ -0.84
ITCH-201ENST00000262650 CADPSQ9ULU8 1353 aa9.82□□□□□ -0.84
ITCH-201ENST00000262650 MRC2Q9UBG0 1479 aa9.8□□□□□ -0.84
ITCH-201ENST00000262650 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
ITCH-201ENST00000262650 CFTRP13569 1480 aa9.76□□□□□ -0.85
ITCH-201ENST00000262650 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
ITCH-201ENST00000262650 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
ITCH-201ENST00000262650 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
ITCH-201ENST00000262650 AMER1Q5JTC6 1135 aaPredicted RBP9.69□□□□□ -0.86
ITCH-201ENST00000262650 ARXQ96QS3 562 aa9.69□□□□□ -0.86
ITCH-201ENST00000262650 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
ITCH-201ENST00000262650 CCDC88BA6NC98 1476 aa9.59□□□□□ -0.87
ITCH-201ENST00000262650 ABCC8Q09428 1581 aa9.58□□□□□ -0.88
ITCH-201ENST00000262650 IFT140Q96RY7 1462 aa9.57□□□□□ -0.88
ITCH-201ENST00000262650 WDR97A6NE52 1622 aa9.56□□□□□ -0.88
ITCH-201ENST00000262650 DNMBPQ6XZF7 1577 aa9.56□□□□□ -0.88
ITCH-201ENST00000262650 TARBP1Q13395 1621 aaKnown RBP9.55□□□□□ -0.88
ITCH-201ENST00000262650 TOPBP1Q92547 1522 aa9.54□□□□□ -0.88
ITCH-201ENST00000262650 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
ITCH-201ENST00000262650 EIF4G3O43432 1585 aaKnown RBP9.51□□□□□ -0.89
ITCH-201ENST00000262650 RIMBP3CA6NJZ7 1639 aa9.49□□□□□ -0.89
ITCH-201ENST00000262650 RIMBP3BA6NNM3 1639 aa9.49□□□□□ -0.89
ITCH-201ENST00000262650 RIMBP3Q9UFD9 1639 aa9.49□□□□□ -0.89
ITCH-201ENST00000262650 KCNA4P22459 653 aa9.48□□□□□ -0.89
ITCH-201ENST00000262650 ZNF608Q9ULD9 1512 aaPredicted RBP9.47□□□□□ -0.89
ITCH-201ENST00000262650 OSCARQ8IYS5 282 aa9.47□□□□□ -0.89
ITCH-201ENST00000262650 CHD1O14646 1710 aa9.46□□□□□ -0.89
ITCH-201ENST00000262650 POLA1P09884 1462 aaPredicted RBP9.42□□□□□ -0.9
ITCH-201ENST00000262650 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
ITCH-201ENST00000262650 ARHGEF11O15085 1522 aa9.41□□□□□ -0.9
ITCH-201ENST00000262650 RANGAP1P46060 587 aaPredicted RBP9.4□□□□□ -0.9
ITCH-201ENST00000262650 CLASP1Q7Z460 1538 aa9.4□□□□□ -0.9
ITCH-201ENST00000262650 CUX1P39880 1505 aa9.37□□□□□ -0.91
ITCH-201ENST00000262650 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
ITCH-201ENST00000262650 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
ITCH-201ENST00000262650 MAGI1Q96QZ7 1491 aaPredicted RBP9.36□□□□□ -0.91
ITCH-201ENST00000262650 ABCA5Q8WWZ7 1642 aa9.35□□□□□ -0.91
ITCH-201ENST00000262650 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.911e-6■■■□□ 17.3
ITCH-201ENST00000262650 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
ITCH-201ENST00000262650 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
ITCH-201ENST00000262650 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
ITCH-201ENST00000262650 SOGA1O94964 1423 aa9.33□□□□□ -0.92
ITCH-201ENST00000262650 HOMEZQ8IX15 550 aa9.33□□□□□ -0.92
ITCH-201ENST00000262650 SYNJ1O43426 1573 aa9.32□□□□□ -0.92
ITCH-201ENST00000262650 TRIM41Q8WV44 630 aa9.32□□□□□ -0.92
ITCH-201ENST00000262650 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
ITCH-201ENST00000262650 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
ITCH-201ENST00000262650 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
ITCH-201ENST00000262650 KLHL34Q8N239 644 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms