RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 KIF21BO75037 1637 aa20.91■□□□□ 0.94
KCTD3-201ENST00000259154 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
KCTD3-201ENST00000259154 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
KCTD3-201ENST00000259154 HNRNPUQ00839 825 aaKnown RBP eCLIP20.82■□□□□ 0.92
KCTD3-201ENST00000259154 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
KCTD3-201ENST00000259154 DAXXQ9UER7 740 aaPredicted RBP20.78■□□□□ 0.92
KCTD3-201ENST00000259154 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
KCTD3-201ENST00000259154 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
KCTD3-201ENST00000259154 RTN4Q9NQC3 1192 aaKnown RBP20.72■□□□□ 0.91
KCTD3-201ENST00000259154 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
KCTD3-201ENST00000259154 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
KCTD3-201ENST00000259154 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
KCTD3-201ENST00000259154 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
KCTD3-201ENST00000259154 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
KCTD3-201ENST00000259154 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.89
KCTD3-201ENST00000259154 RBM19Q9Y4C8 960 aaKnown RBP20.63■□□□□ 0.89
KCTD3-201ENST00000259154 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
KCTD3-201ENST00000259154 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
KCTD3-201ENST00000259154 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
KCTD3-201ENST00000259154 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
KCTD3-201ENST00000259154 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
KCTD3-201ENST00000259154 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
KCTD3-201ENST00000259154 CUX2O14529 1486 aa20.58■□□□□ 0.88
KCTD3-201ENST00000259154 CLSPNQ9HAW4 1339 aa20.54■□□□□ 0.88
KCTD3-201ENST00000259154 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
KCTD3-201ENST00000259154 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
KCTD3-201ENST00000259154 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
KCTD3-201ENST00000259154 NESP48681 1621 aa20.51■□□□□ 0.87
KCTD3-201ENST00000259154 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
KCTD3-201ENST00000259154 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
KCTD3-201ENST00000259154 IGF1RP08069 1367 aa20.5■□□□□ 0.87
KCTD3-201ENST00000259154 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
KCTD3-201ENST00000259154 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
KCTD3-201ENST00000259154 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
KCTD3-201ENST00000259154 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
KCTD3-201ENST00000259154 ARXQ96QS3 562 aa20.46■□□□□ 0.87
KCTD3-201ENST00000259154 FBLN2P98095 1184 aa20.46■□□□□ 0.87
KCTD3-201ENST00000259154 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
KCTD3-201ENST00000259154 CARMIL1Q5VZK9 1371 aa20.43■□□□□ 0.86
KCTD3-201ENST00000259154 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
KCTD3-201ENST00000259154 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
KCTD3-201ENST00000259154 URB2Q14146 1524 aaKnown RBP20.4■□□□□ 0.86
KCTD3-201ENST00000259154 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
KCTD3-201ENST00000259154 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
KCTD3-201ENST00000259154 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
KCTD3-201ENST00000259154 DEKP35659 375 aaKnown RBP20.38■□□□□ 0.85
KCTD3-201ENST00000259154 PHLDB1Q86UU1 1377 aa20.38■□□□□ 0.85
KCTD3-201ENST00000259154 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
KCTD3-201ENST00000259154 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
KCTD3-201ENST00000259154 ABCA5Q8WWZ7 1642 aa20.36■□□□□ 0.85
KCTD3-201ENST00000259154 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
KCTD3-201ENST00000259154 RRBP1Q9P2E9 1410 aaKnown RBP20.34■□□□□ 0.85
KCTD3-201ENST00000259154 MRS2Q9HD23 443 aa20.33■□□□□ 0.84
KCTD3-201ENST00000259154 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
KCTD3-201ENST00000259154 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
KCTD3-201ENST00000259154 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
KCTD3-201ENST00000259154 TONSLQ96HA7 1378 aa20.29■□□□□ 0.84
KCTD3-201ENST00000259154 CHIC2Q9UKJ5 165 aa20.29■□□□□ 0.84
KCTD3-201ENST00000259154 CUL7Q14999 1698 aa20.25■□□□□ 0.83
KCTD3-201ENST00000259154 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
KCTD3-201ENST00000259154 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
KCTD3-201ENST00000259154 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
KCTD3-201ENST00000259154 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
KCTD3-201ENST00000259154 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
KCTD3-201ENST00000259154 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
KCTD3-201ENST00000259154 SLC4A1APQ9BWU0 796 aaKnown RBP20.17■□□□□ 0.82
KCTD3-201ENST00000259154 SETD5Q9C0A6 1442 aa20.16■□□□□ 0.82
KCTD3-201ENST00000259154 PCF11O94913 1555 aaKnown RBP20.15■□□□□ 0.82
KCTD3-201ENST00000259154 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.81
KCTD3-201ENST00000259154 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
KCTD3-201ENST00000259154 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
KCTD3-201ENST00000259154 ZNF777Q9ULD5 760 aaPredicted RBP20.11■□□□□ 0.81
KCTD3-201ENST00000259154 WDR62O43379 1518 aa20.11■□□□□ 0.81
KCTD3-201ENST00000259154 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
KCTD3-201ENST00000259154 NEFMP07197 916 aa20.08■□□□□ 0.8
KCTD3-201ENST00000259154 THOC2Q8NI27 1593 aaKnown RBP20.07■□□□□ 0.8
KCTD3-201ENST00000259154 TMC1Q8TDI8 760 aa20.05■□□□□ 0.8
KCTD3-201ENST00000259154 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
KCTD3-201ENST00000259154 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
KCTD3-201ENST00000259154 FOXD1Q16676 465 aa20.04■□□□□ 0.8
KCTD3-201ENST00000259154 MTUS2Q5JR59 1369 aa20.03■□□□□ 0.8
KCTD3-201ENST00000259154 MAP3K1Q13233 1512 aa20.02■□□□□ 0.8
KCTD3-201ENST00000259154 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
KCTD3-201ENST00000259154 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
KCTD3-201ENST00000259154 PTPRKQ15262 1439 aa20.02■□□□□ 0.79
KCTD3-201ENST00000259154 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
KCTD3-201ENST00000259154 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
KCTD3-201ENST00000259154 PPP1R15AO75807 674 aaPredicted RBP19.97■□□□□ 0.79
KCTD3-201ENST00000259154 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
KCTD3-201ENST00000259154 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
KCTD3-201ENST00000259154 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
KCTD3-201ENST00000259154 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
KCTD3-201ENST00000259154 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
KCTD3-201ENST00000259154 EIF4G2P78344 907 aaKnown RBP eCLIP19.93■□□□□ 0.78
KCTD3-201ENST00000259154 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.781e-7■■■□□ 17.9
KCTD3-201ENST00000259154 CANXP27824 592 aaKnown RBP19.9■□□□□ 0.78
KCTD3-201ENST00000259154 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
KCTD3-201ENST00000259154 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
KCTD3-201ENST00000259154 SNAPC4Q5SXM2 1469 aa19.87■□□□□ 0.77
KCTD3-201ENST00000259154 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms