RNA–Protein interactions for RNA: ENST00000258436.9

MFSD9-201, Transcript of major facilitator superfamily domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MFSD9, Length 4,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD9-201ENST00000258436 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.14
MFSD9-201ENST00000258436 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
MFSD9-201ENST00000258436 CUX1P39880 1505 aa15.94■□□□□ 0.14
MFSD9-201ENST00000258436 FHAD1B1AJZ9 1412 aa15.93■□□□□ 0.14
MFSD9-201ENST00000258436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.148e-6■■■□□ 14.8
MFSD9-201ENST00000258436 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
MFSD9-201ENST00000258436 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
MFSD9-201ENST00000258436 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
MFSD9-201ENST00000258436 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
MFSD9-201ENST00000258436 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
MFSD9-201ENST00000258436 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
MFSD9-201ENST00000258436 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
MFSD9-201ENST00000258436 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
MFSD9-201ENST00000258436 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
MFSD9-201ENST00000258436 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
MFSD9-201ENST00000258436 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
MFSD9-201ENST00000258436 JPH4Q96JJ6 628 aa15.83■□□□□ 0.13
MFSD9-201ENST00000258436 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
MFSD9-201ENST00000258436 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
MFSD9-201ENST00000258436 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
MFSD9-201ENST00000258436 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
MFSD9-201ENST00000258436 FMN1Q68DA7 1419 aa15.78■□□□□ 0.12
MFSD9-201ENST00000258436 KDM2AQ9Y2K7 1162 aa15.78■□□□□ 0.12
MFSD9-201ENST00000258436 PRXQ9BXM0 1461 aa15.77■□□□□ 0.12
MFSD9-201ENST00000258436 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
MFSD9-201ENST00000258436 KIF21BO75037 1637 aa15.76■□□□□ 0.11
MFSD9-201ENST00000258436 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
MFSD9-201ENST00000258436 ANP32CO43423 234 aa15.72■□□□□ 0.11
MFSD9-201ENST00000258436 NEFLP07196 543 aa15.72■□□□□ 0.11
MFSD9-201ENST00000258436 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
MFSD9-201ENST00000258436 FOXD1Q16676 465 aa15.72■□□□□ 0.11
MFSD9-201ENST00000258436 MIER1Q8N108 512 aa15.72■□□□□ 0.11
MFSD9-201ENST00000258436 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
MFSD9-201ENST00000258436 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
MFSD9-201ENST00000258436 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
MFSD9-201ENST00000258436 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
MFSD9-201ENST00000258436 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
MFSD9-201ENST00000258436 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
MFSD9-201ENST00000258436 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
MFSD9-201ENST00000258436 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
MFSD9-201ENST00000258436 SETD5Q9C0A6 1442 aa15.64■□□□□ 0.09
MFSD9-201ENST00000258436 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
MFSD9-201ENST00000258436 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
MFSD9-201ENST00000258436 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
MFSD9-201ENST00000258436 PHLDB1Q86UU1 1377 aa15.61■□□□□ 0.09
MFSD9-201ENST00000258436 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
MFSD9-201ENST00000258436 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
MFSD9-201ENST00000258436 ZNF644Q9H582 1327 aaPredicted RBP15.59■□□□□ 0.09
MFSD9-201ENST00000258436 LAMC3Q9Y6N6 1575 aa15.58■□□□□ 0.09
MFSD9-201ENST00000258436 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
MFSD9-201ENST00000258436 BCANQ96GW7 911 aa15.56■□□□□ 0.08
MFSD9-201ENST00000258436 PTPRGP23470 1445 aa15.55■□□□□ 0.08
MFSD9-201ENST00000258436 ACIN1Q9UKV3 1341 aaKnown RBP15.55■□□□□ 0.08
MFSD9-201ENST00000258436 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
MFSD9-201ENST00000258436 CLSPNQ9HAW4 1339 aa15.52■□□□□ 0.08
MFSD9-201ENST00000258436 EIF4G2P78344 907 aaKnown RBP eCLIP15.52■□□□□ 0.08
MFSD9-201ENST00000258436 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.07
MFSD9-201ENST00000258436 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
MFSD9-201ENST00000258436 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
MFSD9-201ENST00000258436 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
MFSD9-201ENST00000258436 MPHOSPH9Q99550 1183 aa15.51■□□□□ 0.07
MFSD9-201ENST00000258436 PKD2Q13563 968 aa15.51■□□□□ 0.07
MFSD9-201ENST00000258436 SENP3-EIF4A1A0A087X0R7 540 aa15.49■□□□□ 0.07
MFSD9-201ENST00000258436 ESF1Q9H501 851 aaKnown RBP15.49■□□□□ 0.07
MFSD9-201ENST00000258436 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
MFSD9-201ENST00000258436 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
MFSD9-201ENST00000258436 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
MFSD9-201ENST00000258436 CCDC18Q5T9S5 1454 aa15.47■□□□□ 0.07
MFSD9-201ENST00000258436 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
MFSD9-201ENST00000258436 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
MFSD9-201ENST00000258436 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
MFSD9-201ENST00000258436 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
MFSD9-201ENST00000258436 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
MFSD9-201ENST00000258436 NUP155O75694 1391 aa15.43■□□□□ 0.06
MFSD9-201ENST00000258436 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
MFSD9-201ENST00000258436 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
MFSD9-201ENST00000258436 HNRNPUQ00839 825 aaKnown RBP eCLIP15.42■□□□□ 0.06
MFSD9-201ENST00000258436 GGT6Q6P531 493 aa15.41■□□□□ 0.06
MFSD9-201ENST00000258436 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
MFSD9-201ENST00000258436 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
MFSD9-201ENST00000258436 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
MFSD9-201ENST00000258436 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
MFSD9-201ENST00000258436 NCOA2Q15596 1464 aa15.4■□□□□ 0.06
MFSD9-201ENST00000258436 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
MFSD9-201ENST00000258436 MLECQ14165 292 aa15.38■□□□□ 0.05
MFSD9-201ENST00000258436 MYOM3Q5VTT5 1437 aa15.38■□□□□ 0.05
MFSD9-201ENST00000258436 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
MFSD9-201ENST00000258436 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
MFSD9-201ENST00000258436 FYCO1Q9BQS8 1478 aa15.36■□□□□ 0.05
MFSD9-201ENST00000258436 ARID4BQ4LE39 1312 aaPredicted RBP15.34■□□□□ 0.05
MFSD9-201ENST00000258436 KIF3BO15066 747 aa15.34■□□□□ 0.05
MFSD9-201ENST00000258436 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
MFSD9-201ENST00000258436 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
MFSD9-201ENST00000258436 CDK13Q14004 1512 aaKnown RBP15.33■□□□□ 0.05
MFSD9-201ENST00000258436 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
MFSD9-201ENST00000258436 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
MFSD9-201ENST00000258436 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
MFSD9-201ENST00000258436 EFCAB5A4FU69 1503 aa15.32■□□□□ 0.04
MFSD9-201ENST00000258436 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
MFSD9-201ENST00000258436 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms