RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
NIP7-201ENST00000254940 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
NIP7-201ENST00000254940 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
NIP7-201ENST00000254940 CTTNBP2Q8WZ74 1663 aa19.42■□□□□ 0.7
NIP7-201ENST00000254940 NUP160Q12769 1436 aa19.41■□□□□ 0.7
NIP7-201ENST00000254940 IQGAP2Q13576 1575 aa19.36■□□□□ 0.69
NIP7-201ENST00000254940 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
NIP7-201ENST00000254940 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
NIP7-201ENST00000254940 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
NIP7-201ENST00000254940 ERCC6L2Q5T890 1561 aa19.34■□□□□ 0.69
NIP7-201ENST00000254940 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
NIP7-201ENST00000254940 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
NIP7-201ENST00000254940 PRG4Q92954 1404 aaPredicted RBP19.29■□□□□ 0.68
NIP7-201ENST00000254940 CLIP1P30622 1438 aa19.27■□□□□ 0.68
NIP7-201ENST00000254940 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
NIP7-201ENST00000254940 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
NIP7-201ENST00000254940 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
NIP7-201ENST00000254940 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
NIP7-201ENST00000254940 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
NIP7-201ENST00000254940 ATP1B4Q9UN42 357 aaPredicted RBP19.21■□□□□ 0.67
NIP7-201ENST00000254940 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
NIP7-201ENST00000254940 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
NIP7-201ENST00000254940 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
NIP7-201ENST00000254940 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
NIP7-201ENST00000254940 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
NIP7-201ENST00000254940 SAMD9Q5K651 1589 aa19.15■□□□□ 0.66
NIP7-201ENST00000254940 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
NIP7-201ENST00000254940 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
NIP7-201ENST00000254940 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
NIP7-201ENST00000254940 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
NIP7-201ENST00000254940 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
NIP7-201ENST00000254940 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
NIP7-201ENST00000254940 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.65
NIP7-201ENST00000254940 PTPRGP23470 1445 aa19.08■□□□□ 0.65
NIP7-201ENST00000254940 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
NIP7-201ENST00000254940 DNAJC5Q9H3Z4 198 aa19.06■□□□□ 0.64
NIP7-201ENST00000254940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
NIP7-201ENST00000254940 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
NIP7-201ENST00000254940 PCF11O94913 1555 aaKnown RBP19■□□□□ 0.63
NIP7-201ENST00000254940 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
NIP7-201ENST00000254940 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
NIP7-201ENST00000254940 RAPGEF6Q8TEU7 1601 aa18.93■□□□□ 0.62
NIP7-201ENST00000254940 LRRIQ1Q96JM4 1722 aa18.93■□□□□ 0.62
NIP7-201ENST00000254940 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
NIP7-201ENST00000254940 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
NIP7-201ENST00000254940 ADCY10Q96PN6 1610 aa18.91■□□□□ 0.62
NIP7-201ENST00000254940 ABCA8O94911 1581 aa18.9■□□□□ 0.62
NIP7-201ENST00000254940 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
NIP7-201ENST00000254940 CASKIN1Q8WXD9 1431 aa18.88■□□□□ 0.61
NIP7-201ENST00000254940 KANK4Q5T7N3 995 aaPredicted RBP18.86■□□□□ 0.61
NIP7-201ENST00000254940 APLP2Q06481 763 aa18.85■□□□□ 0.61
NIP7-201ENST00000254940 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
NIP7-201ENST00000254940 HECW1Q76N89 1606 aa18.84■□□□□ 0.61
NIP7-201ENST00000254940 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
NIP7-201ENST00000254940 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.61
NIP7-201ENST00000254940 ATP10BO94823 1461 aa18.82■□□□□ 0.6
NIP7-201ENST00000254940 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
NIP7-201ENST00000254940 ZCCHC11Q5TAX3 1644 aaKnown RBP18.81■□□□□ 0.6
NIP7-201ENST00000254940 TRIM26Q12899 539 aaPredicted RBP18.81■□□□□ 0.6
NIP7-201ENST00000254940 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
NIP7-201ENST00000254940 MAGI3Q5TCQ9 1506 aa18.77■□□□□ 0.6
NIP7-201ENST00000254940 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
NIP7-201ENST00000254940 UHRF1BP1LA0JNW5 1464 aa18.75■□□□□ 0.59
NIP7-201ENST00000254940 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
NIP7-201ENST00000254940 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
NIP7-201ENST00000254940 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
NIP7-201ENST00000254940 CFAP43Q8NDM7 1665 aa18.71■□□□□ 0.59
NIP7-201ENST00000254940 ASXL2Q76L83 1435 aa18.7■□□□□ 0.58
NIP7-201ENST00000254940 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
NIP7-201ENST00000254940 KIF14Q15058 1648 aa18.67■□□□□ 0.58
NIP7-201ENST00000254940 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
NIP7-201ENST00000254940 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
NIP7-201ENST00000254940 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
NIP7-201ENST00000254940 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
NIP7-201ENST00000254940 TROQ12816 1431 aaPredicted RBP18.61■□□□□ 0.57
NIP7-201ENST00000254940 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
NIP7-201ENST00000254940 HRCP23327 699 aa18.6■□□□□ 0.57
NIP7-201ENST00000254940 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
NIP7-201ENST00000254940 ZNF777Q9ULD5 760 aaPredicted RBP18.58■□□□□ 0.56
NIP7-201ENST00000254940 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
NIP7-201ENST00000254940 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
NIP7-201ENST00000254940 TSPOAP1O95153 1857 aa18.57■□□□□ 0.56
NIP7-201ENST00000254940 PHLDB1Q86UU1 1377 aa18.57■□□□□ 0.56
NIP7-201ENST00000254940 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
NIP7-201ENST00000254940 SUPT6HQ7KZ85 1726 aaKnown RBP18.54■□□□□ 0.56
NIP7-201ENST00000254940 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
NIP7-201ENST00000254940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
NIP7-201ENST00000254940 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.55
NIP7-201ENST00000254940 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
NIP7-201ENST00000254940 ITGAEP38570 1179 aa18.51■□□□□ 0.55
NIP7-201ENST00000254940 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
NIP7-201ENST00000254940 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
NIP7-201ENST00000254940 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
NIP7-201ENST00000254940 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
NIP7-201ENST00000254940 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
NIP7-201ENST00000254940 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
NIP7-201ENST00000254940 GPATCH8Q9UKJ3 1502 aaKnown RBP18.45■□□□□ 0.54
NIP7-201ENST00000254940 CD109Q6YHK3 1445 aa18.45■□□□□ 0.54
NIP7-201ENST00000254940 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
NIP7-201ENST00000254940 CDC42BPBQ9Y5S2 1711 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms