RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 CEP162Q5TB80 1403 aa30.74■■■□□ 2.51
SBDS-201ENST00000246868 NUP160Q12769 1436 aa30.69■■■□□ 2.5
SBDS-201ENST00000246868 CEP170Q5SW79 1584 aa30.68■■■□□ 2.5
SBDS-201ENST00000246868 RANGAP1P46060 587 aaPredicted RBP30.66■■■□□ 2.5
SBDS-201ENST00000246868 KIAA0586Q9BVV6 1533 aa30.66■■■□□ 2.5
SBDS-201ENST00000246868 CLIP1P30622 1438 aa30.65■■■□□ 2.5
SBDS-201ENST00000246868 IQGAP2Q13576 1575 aa30.65■■■□□ 2.5
SBDS-201ENST00000246868 EFCAB5A4FU69 1503 aa30.51■■■□□ 2.47
SBDS-201ENST00000246868 ARHGAP35Q9NRY4 1499 aa30.48■■■□□ 2.47
SBDS-201ENST00000246868 UGGT2Q9NYU1 1516 aa30.48■■■□□ 2.47
SBDS-201ENST00000246868 OSCARQ8IYS5 282 aa30.44■■■□□ 2.46
SBDS-201ENST00000246868 JPH4Q96JJ6 628 aa30.44■■■□□ 2.46
SBDS-201ENST00000246868 SAMD9Q5K651 1589 aa30.42■■■□□ 2.46
SBDS-201ENST00000246868 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
SBDS-201ENST00000246868 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
SBDS-201ENST00000246868 P3H3Q8IVL6 736 aa30.36■■■□□ 2.45
SBDS-201ENST00000246868 CARMIL2Q6F5E8 1435 aa30.35■■■□□ 2.45
SBDS-201ENST00000246868 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
SBDS-201ENST00000246868 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
SBDS-201ENST00000246868 DISP1Q96F81 1524 aa30.32■■■□□ 2.44
SBDS-201ENST00000246868 KIAA0556O60303 1618 aa30.32■■■□□ 2.44
SBDS-201ENST00000246868 VPS8Q8N3P4 1428 aa30.3■■■□□ 2.44
SBDS-201ENST00000246868 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
SBDS-201ENST00000246868 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
SBDS-201ENST00000246868 TTBK1Q5TCY1 1321 aaPredicted RBP30.11■■■□□ 2.41
SBDS-201ENST00000246868 ERCC6L2Q5T890 1561 aa30.09■■■□□ 2.41
SBDS-201ENST00000246868 CASKIN1Q8WXD9 1431 aa30.07■■■□□ 2.41
SBDS-201ENST00000246868 APLP2Q06481 763 aa30.07■■■□□ 2.4
SBDS-201ENST00000246868 FYCO1Q9BQS8 1478 aa30.07■■■□□ 2.4
SBDS-201ENST00000246868 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
SBDS-201ENST00000246868 PTPRGP23470 1445 aa30.07■■■□□ 2.4
SBDS-201ENST00000246868 ATP1B4Q9UN42 357 aaPredicted RBP30.03■■■□□ 2.4
SBDS-201ENST00000246868 HECW1Q76N89 1606 aa29.97■■■□□ 2.39
SBDS-201ENST00000246868 RAPGEF6Q8TEU7 1601 aa29.97■■■□□ 2.39
SBDS-201ENST00000246868 PLB1Q6P1J6 1458 aa29.94■■■□□ 2.38
SBDS-201ENST00000246868 ABCA8O94911 1581 aa29.91■■■□□ 2.38
SBDS-201ENST00000246868 ARHGEF11O15085 1522 aa29.9■■■□□ 2.38
SBDS-201ENST00000246868 MAP3K1Q13233 1512 aa29.89■■■□□ 2.37
SBDS-201ENST00000246868 UACAQ9BZF9 1416 aa29.88■■■□□ 2.37
SBDS-201ENST00000246868 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
SBDS-201ENST00000246868 TIAM1Q13009 1591 aa29.86■■■□□ 2.37
SBDS-201ENST00000246868 NUP153P49790 1475 aaKnown RBP29.85■■■□□ 2.37
SBDS-201ENST00000246868 CFAP43Q8NDM7 1665 aa29.84■■■□□ 2.37
SBDS-201ENST00000246868 EPRSP07814 1512 aaKnown RBP29.83■■■□□ 2.37
SBDS-201ENST00000246868 LRRIQ1Q96JM4 1722 aa29.82■■■□□ 2.36
SBDS-201ENST00000246868 ABCC2Q92887 1545 aa29.8■■■□□ 2.36
SBDS-201ENST00000246868 PPARGC1BQ86YN6 1023 aaKnown RBP29.79■■■□□ 2.36
SBDS-201ENST00000246868 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
SBDS-201ENST00000246868 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
SBDS-201ENST00000246868 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
SBDS-201ENST00000246868 ARID3CA6NKF2 412 aa29.77■■■□□ 2.36
SBDS-201ENST00000246868 UHRF1BP1LA0JNW5 1464 aa29.77■■■□□ 2.36
SBDS-201ENST00000246868 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.35
SBDS-201ENST00000246868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
SBDS-201ENST00000246868 HNRNPUL2Q1KMD3 747 aaKnown RBP29.75■■■□□ 2.35
SBDS-201ENST00000246868 LRRC9Q6ZRR7 1453 aa29.72■■■□□ 2.35
SBDS-201ENST00000246868 KANK4Q5T7N3 995 aaPredicted RBP29.71■■■□□ 2.35
SBDS-201ENST00000246868 CDK11AQ9UQ88 783 aaPredicted RBP29.71■■■□□ 2.35
SBDS-201ENST00000246868 MTUS2Q5JR59 1369 aa29.69■■■□□ 2.34
SBDS-201ENST00000246868 ATP10BO94823 1461 aa29.69■■■□□ 2.34
SBDS-201ENST00000246868 ADCY10Q96PN6 1610 aa29.67■■■□□ 2.34
SBDS-201ENST00000246868 EHBP1L1Q8N3D4 1523 aa29.63■■■□□ 2.33
SBDS-201ENST00000246868 KDM5BQ9UGL1 1544 aa29.62■■■□□ 2.33
SBDS-201ENST00000246868 CYB5RLQ6IPT4 315 aa29.62■■■□□ 2.33
SBDS-201ENST00000246868 PLEKHD1A6NEE1 506 aa29.59■■■□□ 2.33
SBDS-201ENST00000246868 ZCCHC11Q5TAX3 1644 aaKnown RBP29.59■■■□□ 2.33
SBDS-201ENST00000246868 MAGI3Q5TCQ9 1506 aa29.57■■■□□ 2.32
SBDS-201ENST00000246868 NPM1P06748 294 aaKnown RBP eCLIP29.56■■■□□ 2.32
SBDS-201ENST00000246868 TROQ12816 1431 aaPredicted RBP29.55■■■□□ 2.32
SBDS-201ENST00000246868 SUPT6HQ7KZ85 1726 aaKnown RBP29.54■■■□□ 2.32
SBDS-201ENST00000246868 NCOA2Q15596 1464 aa29.46■■■□□ 2.31
SBDS-201ENST00000246868 TRIM26Q12899 539 aaPredicted RBP29.44■■■□□ 2.3
SBDS-201ENST00000246868 KIF14Q15058 1648 aa29.43■■■□□ 2.3
SBDS-201ENST00000246868 DNAJC5Q9H3Z4 198 aa29.41■■■□□ 2.3
SBDS-201ENST00000246868 PHLDB1Q86UU1 1377 aa29.39■■■□□ 2.29
SBDS-201ENST00000246868 WDR7Q9Y4E6 1490 aa29.38■■■□□ 2.29
SBDS-201ENST00000246868 ASXL2Q76L83 1435 aa29.37■■■□□ 2.29
SBDS-201ENST00000246868 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
SBDS-201ENST00000246868 KCNH8Q96L42 1107 aa29.33■■■□□ 2.29
SBDS-201ENST00000246868 MYOM3Q5VTT5 1437 aa29.32■■■□□ 2.28
SBDS-201ENST00000246868 MAPKBP1O60336 1514 aa29.3■■■□□ 2.28
SBDS-201ENST00000246868 RRBP1Q9P2E9 1410 aaKnown RBP29.28■■■□□ 2.28
SBDS-201ENST00000246868 ABCC10Q5T3U5 1492 aa29.28■■■□□ 2.28
SBDS-201ENST00000246868 ITSN2Q9NZM3 1697 aa29.26■■■□□ 2.27
SBDS-201ENST00000246868 FGD6Q6ZV73 1430 aa29.25■■■□□ 2.27
SBDS-201ENST00000246868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.24■■■□□ 2.27
SBDS-201ENST00000246868 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
SBDS-201ENST00000246868 MIA2Q96PC5 1412 aa29.22■■■□□ 2.27
SBDS-201ENST00000246868 TTC37Q6PGP7 1564 aa29.21■■■□□ 2.27
SBDS-201ENST00000246868 GPATCH8Q9UKJ3 1502 aaKnown RBP29.21■■■□□ 2.27
SBDS-201ENST00000246868 CDC42BPAQ5VT25 1732 aa29.19■■■□□ 2.26
SBDS-201ENST00000246868 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
SBDS-201ENST00000246868 MYO5CQ9NQX4 1742 aa29.16■■■□□ 2.26
SBDS-201ENST00000246868 FAM50AQ14320 339 aaKnown RBP29.16■■■□□ 2.26
SBDS-201ENST00000246868 ABCA9Q8IUA7 1624 aa29.16■■■□□ 2.26
SBDS-201ENST00000246868 PTPN23Q9H3S7 1636 aa29.16■■■□□ 2.26
SBDS-201ENST00000246868 PREX2Q70Z35 1606 aa29.14■■■□□ 2.26
SBDS-201ENST00000246868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.14■■■□□ 2.26
SBDS-201ENST00000246868 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
SBDS-201ENST00000246868 ARHGAP5Q13017 1502 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms