RNA–Protein interactions for RNA: ENST00000241001.13

PAX6-201, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-201ENST00000241001 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
PAX6-201ENST00000241001 TARBP1Q13395 1621 aaKnown RBP19.21■□□□□ 0.67
PAX6-201ENST00000241001 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
PAX6-201ENST00000241001 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
PAX6-201ENST00000241001 WDR62O43379 1518 aa19.19■□□□□ 0.66
PAX6-201ENST00000241001 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
PAX6-201ENST00000241001 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
PAX6-201ENST00000241001 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
PAX6-201ENST00000241001 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
PAX6-201ENST00000241001 PBRM1Q86U86 1689 aa19.12■□□□□ 0.65
PAX6-201ENST00000241001 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
PAX6-201ENST00000241001 HNRNPUL2Q1KMD3 747 aaKnown RBP19.09■□□□□ 0.65
PAX6-201ENST00000241001 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
PAX6-201ENST00000241001 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
PAX6-201ENST00000241001 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
PAX6-201ENST00000241001 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
PAX6-201ENST00000241001 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
PAX6-201ENST00000241001 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
PAX6-201ENST00000241001 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
PAX6-201ENST00000241001 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
PAX6-201ENST00000241001 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
PAX6-201ENST00000241001 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
PAX6-201ENST00000241001 SNAPC4Q5SXM2 1469 aa18.99■□□□□ 0.63
PAX6-201ENST00000241001 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
PAX6-201ENST00000241001 IQGAP2Q13576 1575 aa18.93■□□□□ 0.62
PAX6-201ENST00000241001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.93■□□□□ 0.62
PAX6-201ENST00000241001 DHX57Q6P158 1386 aaKnown RBP18.91■□□□□ 0.62
PAX6-201ENST00000241001 PHLDB1Q86UU1 1377 aa18.9■□□□□ 0.62
PAX6-201ENST00000241001 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
PAX6-201ENST00000241001 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
PAX6-201ENST00000241001 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
PAX6-201ENST00000241001 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
PAX6-201ENST00000241001 EHBP1L1Q8N3D4 1523 aa18.85■□□□□ 0.61
PAX6-201ENST00000241001 UGGT2Q9NYU1 1516 aa18.85■□□□□ 0.61
PAX6-201ENST00000241001 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
PAX6-201ENST00000241001 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
PAX6-201ENST00000241001 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
PAX6-201ENST00000241001 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
PAX6-201ENST00000241001 MAGI1Q96QZ7 1491 aaPredicted RBP18.79■□□□□ 0.6
PAX6-201ENST00000241001 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
PAX6-201ENST00000241001 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
PAX6-201ENST00000241001 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
PAX6-201ENST00000241001 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
PAX6-201ENST00000241001 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.59
PAX6-201ENST00000241001 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.59
PAX6-201ENST00000241001 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
PAX6-201ENST00000241001 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
PAX6-201ENST00000241001 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
PAX6-201ENST00000241001 NCOA2Q15596 1464 aa18.73■□□□□ 0.59
PAX6-201ENST00000241001 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
PAX6-201ENST00000241001 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
PAX6-201ENST00000241001 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
PAX6-201ENST00000241001 FAM50AQ14320 339 aaKnown RBP18.69■□□□□ 0.58
PAX6-201ENST00000241001 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
PAX6-201ENST00000241001 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
PAX6-201ENST00000241001 ITGAEP38570 1179 aa18.67■□□□□ 0.58
PAX6-201ENST00000241001 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
PAX6-201ENST00000241001 PTPN23Q9H3S7 1636 aa18.66■□□□□ 0.58
PAX6-201ENST00000241001 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
PAX6-201ENST00000241001 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
PAX6-201ENST00000241001 HFM1A2PYH4 1435 aa18.62■□□□□ 0.57
PAX6-201ENST00000241001 RAPGEF6Q8TEU7 1601 aa18.62■□□□□ 0.57
PAX6-201ENST00000241001 CEP170Q5SW79 1584 aa18.61■□□□□ 0.57
PAX6-201ENST00000241001 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
PAX6-201ENST00000241001 NUP160Q12769 1436 aa18.6■□□□□ 0.57
PAX6-201ENST00000241001 MIA2Q96PC5 1412 aa18.6■□□□□ 0.57
PAX6-201ENST00000241001 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
PAX6-201ENST00000241001 AKNAQ7Z591 1439 aa18.58■□□□□ 0.57
PAX6-201ENST00000241001 CDK13Q14004 1512 aaKnown RBP18.57■□□□□ 0.56
PAX6-201ENST00000241001 GCC2Q8IWJ2 1684 aa18.57■□□□□ 0.56
PAX6-201ENST00000241001 TIMELESSQ9UNS1 1208 aa18.56■□□□□ 0.56
PAX6-201ENST00000241001 NUP153P49790 1475 aaKnown RBP18.55■□□□□ 0.56
PAX6-201ENST00000241001 CHD1O14646 1710 aa18.54■□□□□ 0.56
PAX6-201ENST00000241001 PTPRKQ15262 1439 aa18.52■□□□□ 0.56
PAX6-201ENST00000241001 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
PAX6-201ENST00000241001 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.55
PAX6-201ENST00000241001 FBLN2P98095 1184 aa18.52■□□□□ 0.55
PAX6-201ENST00000241001 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.55
PAX6-201ENST00000241001 NAIPQ13075 1403 aa18.51■□□□□ 0.55
PAX6-201ENST00000241001 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
PAX6-201ENST00000241001 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
PAX6-201ENST00000241001 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
PAX6-201ENST00000241001 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
PAX6-201ENST00000241001 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
PAX6-201ENST00000241001 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
PAX6-201ENST00000241001 DNMT1P26358 1616 aaKnown RBP18.44■□□□□ 0.54
PAX6-201ENST00000241001 ABCA8O94911 1581 aa18.42■□□□□ 0.54
PAX6-201ENST00000241001 ROCK1Q13464 1354 aa18.41■□□□□ 0.54
PAX6-201ENST00000241001 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
PAX6-201ENST00000241001 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
PAX6-201ENST00000241001 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
PAX6-201ENST00000241001 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
PAX6-201ENST00000241001 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
PAX6-201ENST00000241001 DAPK1P53355 1430 aa18.37■□□□□ 0.53
PAX6-201ENST00000241001 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
PAX6-201ENST00000241001 MIER1Q8N108 512 aa18.34■□□□□ 0.53
PAX6-201ENST00000241001 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
PAX6-201ENST00000241001 SHROOM2Q13796 1616 aa18.32■□□□□ 0.52
PAX6-201ENST00000241001 KIF14Q15058 1648 aa18.32■□□□□ 0.52
PAX6-201ENST00000241001 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms