RNA–Protein interactions for RNA: ENST00000241001.13

PAX6-201, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-201ENST00000241001 NISCHQ9Y2I1 1504 aa27.64■■■□□ 2.01
PAX6-201ENST00000241001 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
PAX6-201ENST00000241001 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
PAX6-201ENST00000241001 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
PAX6-201ENST00000241001 ABCC9O60706 1549 aa22.83■■□□□ 1.25
PAX6-201ENST00000241001 SHROOM4Q9ULL8 1493 aa22.75■■□□□ 1.23
PAX6-201ENST00000241001 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
PAX6-201ENST00000241001 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
PAX6-201ENST00000241001 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
PAX6-201ENST00000241001 NACADO15069 1562 aa22.13■■□□□ 1.13
PAX6-201ENST00000241001 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
PAX6-201ENST00000241001 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
PAX6-201ENST00000241001 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
PAX6-201ENST00000241001 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
PAX6-201ENST00000241001 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.01
PAX6-201ENST00000241001 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
PAX6-201ENST00000241001 PABPN1Q86U42 306 aaKnown RBP eCLIP21.34■■□□□ 1.01
PAX6-201ENST00000241001 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
PAX6-201ENST00000241001 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
PAX6-201ENST00000241001 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
PAX6-201ENST00000241001 WIZO95785 1651 aa21.2■□□□□ 0.98
PAX6-201ENST00000241001 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
PAX6-201ENST00000241001 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
PAX6-201ENST00000241001 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
PAX6-201ENST00000241001 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
PAX6-201ENST00000241001 PEG3Q9GZU2 1588 aa20.92■□□□□ 0.94
PAX6-201ENST00000241001 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
PAX6-201ENST00000241001 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
PAX6-201ENST00000241001 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
PAX6-201ENST00000241001 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
PAX6-201ENST00000241001 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
PAX6-201ENST00000241001 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
PAX6-201ENST00000241001 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
PAX6-201ENST00000241001 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
PAX6-201ENST00000241001 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
PAX6-201ENST00000241001 EEA1Q15075 1411 aa20.42■□□□□ 0.86
PAX6-201ENST00000241001 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.86
PAX6-201ENST00000241001 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
PAX6-201ENST00000241001 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
PAX6-201ENST00000241001 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.84
PAX6-201ENST00000241001 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
PAX6-201ENST00000241001 HRCP23327 699 aa20.27■□□□□ 0.83
PAX6-201ENST00000241001 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
PAX6-201ENST00000241001 SOGA1O94964 1423 aa20.2■□□□□ 0.82
PAX6-201ENST00000241001 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
PAX6-201ENST00000241001 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
PAX6-201ENST00000241001 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
PAX6-201ENST00000241001 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
PAX6-201ENST00000241001 KIF21BO75037 1637 aa20.12■□□□□ 0.81
PAX6-201ENST00000241001 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
PAX6-201ENST00000241001 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
PAX6-201ENST00000241001 CFTRP13569 1480 aa20.07■□□□□ 0.8
PAX6-201ENST00000241001 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
PAX6-201ENST00000241001 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
PAX6-201ENST00000241001 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
PAX6-201ENST00000241001 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.79
PAX6-201ENST00000241001 CUX1P39880 1505 aa19.93■□□□□ 0.78
PAX6-201ENST00000241001 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
PAX6-201ENST00000241001 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
PAX6-201ENST00000241001 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
PAX6-201ENST00000241001 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
PAX6-201ENST00000241001 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
PAX6-201ENST00000241001 RAPGEF2Q9Y4G8 1499 aa19.8■□□□□ 0.76
PAX6-201ENST00000241001 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
PAX6-201ENST00000241001 CLIP1P30622 1438 aa19.77■□□□□ 0.75
PAX6-201ENST00000241001 NESP48681 1621 aa19.75■□□□□ 0.75
PAX6-201ENST00000241001 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
PAX6-201ENST00000241001 FANCD2Q9BXW9 1451 aa19.65■□□□□ 0.74
PAX6-201ENST00000241001 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
PAX6-201ENST00000241001 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
PAX6-201ENST00000241001 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
PAX6-201ENST00000241001 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
PAX6-201ENST00000241001 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
PAX6-201ENST00000241001 CUX2O14529 1486 aa19.58■□□□□ 0.73
PAX6-201ENST00000241001 ARAP1Q96P48 1450 aa19.52■□□□□ 0.72
PAX6-201ENST00000241001 TOPBP1Q92547 1522 aa19.52■□□□□ 0.71
PAX6-201ENST00000241001 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
PAX6-201ENST00000241001 IGF1RP08069 1367 aa19.5■□□□□ 0.71
PAX6-201ENST00000241001 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
PAX6-201ENST00000241001 APLP2Q06481 763 aa19.46■□□□□ 0.71
PAX6-201ENST00000241001 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
PAX6-201ENST00000241001 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
PAX6-201ENST00000241001 CUL7Q14999 1698 aa19.44■□□□□ 0.7
PAX6-201ENST00000241001 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
PAX6-201ENST00000241001 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
PAX6-201ENST00000241001 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
PAX6-201ENST00000241001 ARHGAP35Q9NRY4 1499 aa19.4■□□□□ 0.7
PAX6-201ENST00000241001 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
PAX6-201ENST00000241001 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
PAX6-201ENST00000241001 RAD54L2Q9Y4B4 1467 aa19.34■□□□□ 0.69
PAX6-201ENST00000241001 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
PAX6-201ENST00000241001 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
PAX6-201ENST00000241001 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
PAX6-201ENST00000241001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
PAX6-201ENST00000241001 CTTNBP2Q8WZ74 1663 aa19.3■□□□□ 0.68
PAX6-201ENST00000241001 EFCAB5A4FU69 1503 aa19.29■□□□□ 0.68
PAX6-201ENST00000241001 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
PAX6-201ENST00000241001 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
PAX6-201ENST00000241001 FHAD1B1AJZ9 1412 aa19.24■□□□□ 0.67
PAX6-201ENST00000241001 TIAM1Q13009 1591 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms