RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 BIVM-ERCC5R4GMW8 1640 aa22.3■■□□□ 1.16
PDZD11-201ENST00000239666 PBRM1Q86U86 1689 aa22.27■■□□□ 1.16
PDZD11-201ENST00000239666 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
PDZD11-201ENST00000239666 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
PDZD11-201ENST00000239666 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
PDZD11-201ENST00000239666 HOXD11P31277 338 aaPredicted RBP22.19■■□□□ 1.14
PDZD11-201ENST00000239666 CLASP1Q7Z460 1538 aa22.17■■□□□ 1.14
PDZD11-201ENST00000239666 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PDZD11-201ENST00000239666 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
PDZD11-201ENST00000239666 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
PDZD11-201ENST00000239666 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
PDZD11-201ENST00000239666 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
PDZD11-201ENST00000239666 NUP160Q12769 1436 aa22■■□□□ 1.11
PDZD11-201ENST00000239666 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
PDZD11-201ENST00000239666 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
PDZD11-201ENST00000239666 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
PDZD11-201ENST00000239666 CUL7Q14999 1698 aa21.86■■□□□ 1.09
PDZD11-201ENST00000239666 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
PDZD11-201ENST00000239666 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
PDZD11-201ENST00000239666 IGF1RP08069 1367 aa21.84■■□□□ 1.09
PDZD11-201ENST00000239666 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
PDZD11-201ENST00000239666 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
PDZD11-201ENST00000239666 KIAA0586Q9BVV6 1533 aa21.75■■□□□ 1.07
PDZD11-201ENST00000239666 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
PDZD11-201ENST00000239666 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
PDZD11-201ENST00000239666 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
PDZD11-201ENST00000239666 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
PDZD11-201ENST00000239666 NPM1P06748 294 aaKnown RBP eCLIP21.7■■□□□ 1.06
PDZD11-201ENST00000239666 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
PDZD11-201ENST00000239666 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
PDZD11-201ENST00000239666 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.04
PDZD11-201ENST00000239666 IQGAP2Q13576 1575 aa21.54■■□□□ 1.04
PDZD11-201ENST00000239666 PTPRGP23470 1445 aa21.52■■□□□ 1.04
PDZD11-201ENST00000239666 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
PDZD11-201ENST00000239666 MAPKBP1O60336 1514 aa21.48■■□□□ 1.03
PDZD11-201ENST00000239666 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
PDZD11-201ENST00000239666 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
PDZD11-201ENST00000239666 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
PDZD11-201ENST00000239666 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
PDZD11-201ENST00000239666 FAM69CQ0P6D2 419 aa21.41■■□□□ 1.02
PDZD11-201ENST00000239666 KIF13AQ9H1H9 1805 aa21.39■■□□□ 1.02
PDZD11-201ENST00000239666 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
PDZD11-201ENST00000239666 GOLGA3Q08378 1498 aa21.38■■□□□ 1.01
PDZD11-201ENST00000239666 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
PDZD11-201ENST00000239666 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
PDZD11-201ENST00000239666 EEA1Q15075 1411 aa21.36■■□□□ 1.01
PDZD11-201ENST00000239666 UACAQ9BZF9 1416 aa21.36■■□□□ 1.01
PDZD11-201ENST00000239666 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
PDZD11-201ENST00000239666 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
PDZD11-201ENST00000239666 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
PDZD11-201ENST00000239666 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
PDZD11-201ENST00000239666 FOXD4L1Q9NU39 408 aa21.34■■□□□ 1.01
PDZD11-201ENST00000239666 ZBTB22O15209 634 aa21.32■■□□□ 1
PDZD11-201ENST00000239666 PLB1Q6P1J6 1458 aa21.32■■□□□ 1
PDZD11-201ENST00000239666 SLC4A2P04920 1241 aa21.31■■□□□ 1
PDZD11-201ENST00000239666 DIP2BQ9P265 1576 aa21.3■■□□□ 1
PDZD11-201ENST00000239666 KIAA0556O60303 1618 aa21.29■■□□□ 1
PDZD11-201ENST00000239666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDZD11-201ENST00000239666 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
PDZD11-201ENST00000239666 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
PDZD11-201ENST00000239666 GLI2P10070 1586 aa21.2■□□□□ 0.98
PDZD11-201ENST00000239666 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
PDZD11-201ENST00000239666 ZCCHC11Q5TAX3 1644 aaKnown RBP21.13■□□□□ 0.97
PDZD11-201ENST00000239666 KDM6BO15054 1643 aa21.12■□□□□ 0.97
PDZD11-201ENST00000239666 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
PDZD11-201ENST00000239666 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
PDZD11-201ENST00000239666 ABCA8O94911 1581 aa21.09■□□□□ 0.97
PDZD11-201ENST00000239666 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
PDZD11-201ENST00000239666 KIF21BO75037 1637 aa21.03■□□□□ 0.96
PDZD11-201ENST00000239666 MAP3K4Q9Y6R4 1608 aa21.03■□□□□ 0.96
PDZD11-201ENST00000239666 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
PDZD11-201ENST00000239666 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
PDZD11-201ENST00000239666 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
PDZD11-201ENST00000239666 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
PDZD11-201ENST00000239666 CD109Q6YHK3 1445 aa20.96■□□□□ 0.95
PDZD11-201ENST00000239666 EFCAB5A4FU69 1503 aa20.96■□□□□ 0.95
PDZD11-201ENST00000239666 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
PDZD11-201ENST00000239666 PPRC1Q5VV67 1664 aaKnown RBP20.96■□□□□ 0.95
PDZD11-201ENST00000239666 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
PDZD11-201ENST00000239666 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
PDZD11-201ENST00000239666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.93■□□□□ 0.94
PDZD11-201ENST00000239666 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
PDZD11-201ENST00000239666 HNRNPUL2Q1KMD3 747 aaKnown RBP20.93■□□□□ 0.94
PDZD11-201ENST00000239666 ATP10BO94823 1461 aa20.93■□□□□ 0.94
PDZD11-201ENST00000239666 PHLDB1Q86UU1 1377 aa20.92■□□□□ 0.94
PDZD11-201ENST00000239666 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
PDZD11-201ENST00000239666 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
PDZD11-201ENST00000239666 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
PDZD11-201ENST00000239666 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
PDZD11-201ENST00000239666 FMN1Q68DA7 1419 aa20.82■□□□□ 0.92
PDZD11-201ENST00000239666 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
PDZD11-201ENST00000239666 ABCA9Q8IUA7 1624 aa20.81■□□□□ 0.92
PDZD11-201ENST00000239666 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
PDZD11-201ENST00000239666 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
PDZD11-201ENST00000239666 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
PDZD11-201ENST00000239666 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
PDZD11-201ENST00000239666 NEO1Q92859 1461 aa20.76■□□□□ 0.91
PDZD11-201ENST00000239666 KDM4FA0A1W2PPD8 638 aa20.74■□□□□ 0.91
PDZD11-201ENST00000239666 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
PDZD11-201ENST00000239666 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms