RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
CENPA-201ENST00000233505 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
CENPA-201ENST00000233505 CSRNP3Q8WYN3 585 aa32.15■■■□□ 2.74
CENPA-201ENST00000233505 KIAA0586Q9BVV6 1533 aa32.07■■■□□ 2.72
CENPA-201ENST00000233505 SHROOM2Q13796 1616 aa32■■■□□ 2.71
CENPA-201ENST00000233505 FAM9AQ8IZU1 332 aaPredicted RBP31.95■■■□□ 2.71
CENPA-201ENST00000233505 JPH4Q96JJ6 628 aa31.94■■■□□ 2.7
CENPA-201ENST00000233505 KIF21BO75037 1637 aa31.88■■■□□ 2.69
CENPA-201ENST00000233505 IQGAP2Q13576 1575 aa31.87■■■□□ 2.69
CENPA-201ENST00000233505 PRG4Q92954 1404 aaPredicted RBP31.86■■■□□ 2.69
CENPA-201ENST00000233505 ERCC6L2Q5T890 1561 aa31.81■■■□□ 2.68
CENPA-201ENST00000233505 UGGT2Q9NYU1 1516 aa31.76■■■□□ 2.68
CENPA-201ENST00000233505 CTTNBP2Q8WZ74 1663 aa31.73■■■□□ 2.67
CENPA-201ENST00000233505 GOLGA3Q08378 1498 aa31.72■■■□□ 2.67
CENPA-201ENST00000233505 CARMIL2Q6F5E8 1435 aa31.71■■■□□ 2.67
CENPA-201ENST00000233505 TRHP20396 242 aaPredicted RBP31.68■■■□□ 2.66
CENPA-201ENST00000233505 DISP1Q96F81 1524 aa31.65■■■□□ 2.66
CENPA-201ENST00000233505 TNIKQ9UKE5 1360 aa31.59■■■□□ 2.65
CENPA-201ENST00000233505 KIAA0556O60303 1618 aa31.57■■■□□ 2.64
CENPA-201ENST00000233505 PTPRGP23470 1445 aa31.53■■■□□ 2.64
CENPA-201ENST00000233505 UBTFP17480 764 aaKnown RBP31.53■■■□□ 2.64
CENPA-201ENST00000233505 SAMD9Q5K651 1589 aa31.46■■■□□ 2.63
CENPA-201ENST00000233505 EHMT2Q96KQ7 1210 aa31.43■■■□□ 2.62
CENPA-201ENST00000233505 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
CENPA-201ENST00000233505 UHRF1BP1LA0JNW5 1464 aa31.34■■■□□ 2.61
CENPA-201ENST00000233505 UACAQ9BZF9 1416 aa31.34■■■□□ 2.61
CENPA-201ENST00000233505 ADCY10Q96PN6 1610 aa31.31■■■□□ 2.6
CENPA-201ENST00000233505 TTBK1Q5TCY1 1321 aaPredicted RBP31.29■■■□□ 2.6
CENPA-201ENST00000233505 ABCC2Q92887 1545 aa31.28■■■□□ 2.6
CENPA-201ENST00000233505 RANGAP1P46060 587 aaPredicted RBP31.27■■■□□ 2.6
CENPA-201ENST00000233505 P3H3Q8IVL6 736 aa31.27■■■□□ 2.6
CENPA-201ENST00000233505 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
CENPA-201ENST00000233505 ARHGAP35Q9NRY4 1499 aa31.25■■■□□ 2.59
CENPA-201ENST00000233505 ABCA8O94911 1581 aa31.23■■■□□ 2.59
CENPA-201ENST00000233505 PLB1Q6P1J6 1458 aa31.22■■■□□ 2.59
CENPA-201ENST00000233505 NPM1P06748 294 aaKnown RBP eCLIP31.2■■■□□ 2.59
CENPA-201ENST00000233505 KDM5BQ9UGL1 1544 aa31.17■■■□□ 2.58
CENPA-201ENST00000233505 MAPKBP1O60336 1514 aa31.15■■■□□ 2.58
CENPA-201ENST00000233505 CLIP1P30622 1438 aa31.15■■■□□ 2.58
CENPA-201ENST00000233505 FMN1Q68DA7 1419 aa31.12■■■□□ 2.57
CENPA-201ENST00000233505 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
CENPA-201ENST00000233505 CEP162Q5TB80 1403 aa31.07■■■□□ 2.56
CENPA-201ENST00000233505 RAPGEF6Q8TEU7 1601 aa31.06■■■□□ 2.56
CENPA-201ENST00000233505 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
CENPA-201ENST00000233505 NUP153P49790 1475 aaKnown RBP31.01■■■□□ 2.55
CENPA-201ENST00000233505 ZCCHC11Q5TAX3 1644 aaKnown RBP30.99■■■□□ 2.55
CENPA-201ENST00000233505 ASXL2Q76L83 1435 aa30.98■■■□□ 2.55
CENPA-201ENST00000233505 ABCC10Q5T3U5 1492 aa30.98■■■□□ 2.55
CENPA-201ENST00000233505 FAM69CQ0P6D2 419 aa30.97■■■□□ 2.55
CENPA-201ENST00000233505 ATP10BO94823 1461 aa30.96■■■□□ 2.55
CENPA-201ENST00000233505 DIP2BQ9P265 1576 aa30.94■■■□□ 2.54
CENPA-201ENST00000233505 CASKIN1Q8WXD9 1431 aa30.9■■■□□ 2.54
CENPA-201ENST00000233505 WDR7Q9Y4E6 1490 aa30.89■■■□□ 2.54
CENPA-201ENST00000233505 HECW1Q76N89 1606 aa30.88■■■□□ 2.53
CENPA-201ENST00000233505 FYCO1Q9BQS8 1478 aa30.84■■■□□ 2.53
CENPA-201ENST00000233505 ARID3CA6NKF2 412 aa30.83■■■□□ 2.53
CENPA-201ENST00000233505 EPRSP07814 1512 aaKnown RBP30.82■■■□□ 2.52
CENPA-201ENST00000233505 PCF11O94913 1555 aaKnown RBP30.81■■■□□ 2.52
CENPA-201ENST00000233505 GLI2P10070 1586 aa30.8■■■□□ 2.52
CENPA-201ENST00000233505 CDK13Q14004 1512 aaKnown RBP30.76■■■□□ 2.51
CENPA-201ENST00000233505 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.51
CENPA-201ENST00000233505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.75■■■□□ 2.51
CENPA-201ENST00000233505 HNRNPUL2Q1KMD3 747 aaKnown RBP30.75■■■□□ 2.51
CENPA-201ENST00000233505 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
CENPA-201ENST00000233505 PLEKHD1A6NEE1 506 aa30.71■■■□□ 2.51
CENPA-201ENST00000233505 VPS8Q8N3P4 1428 aa30.71■■■□□ 2.51
CENPA-201ENST00000233505 TSPOAP1O95153 1857 aa30.7■■■□□ 2.51
CENPA-201ENST00000233505 CDK11AQ9UQ88 783 aaPredicted RBP30.68■■■□□ 2.5
CENPA-201ENST00000233505 KCNH8Q96L42 1107 aa30.64■■■□□ 2.5
CENPA-201ENST00000233505 TROQ12816 1431 aaPredicted RBP30.6■■■□□ 2.49
CENPA-201ENST00000233505 MAP3K4Q9Y6R4 1608 aa30.6■■■□□ 2.49
CENPA-201ENST00000233505 LRRIQ1Q96JM4 1722 aa30.59■■■□□ 2.49
CENPA-201ENST00000233505 KDM6BO15054 1643 aa30.58■■■□□ 2.49
CENPA-201ENST00000233505 ABCA9Q8IUA7 1624 aa30.56■■■□□ 2.48
CENPA-201ENST00000233505 CD109Q6YHK3 1445 aa30.56■■■□□ 2.48
CENPA-201ENST00000233505 CFAP43Q8NDM7 1665 aa30.55■■■□□ 2.48
CENPA-201ENST00000233505 MAGI3Q5TCQ9 1506 aa30.54■■■□□ 2.48
CENPA-201ENST00000233505 PPRC1Q5VV67 1664 aaKnown RBP30.54■■■□□ 2.48
CENPA-201ENST00000233505 TEX14Q8IWB6 1497 aa30.51■■■□□ 2.48
CENPA-201ENST00000233505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.47■■■□□ 2.47
CENPA-201ENST00000233505 KIF14Q15058 1648 aa30.46■■■□□ 2.47
CENPA-201ENST00000233505 MAP3K1Q13233 1512 aa30.45■■■□□ 2.47
CENPA-201ENST00000233505 AEBP2Q6ZN18 517 aaPredicted RBP30.43■■■□□ 2.46
CENPA-201ENST00000233505 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
CENPA-201ENST00000233505 TTC37Q6PGP7 1564 aa30.41■■■□□ 2.46
CENPA-201ENST00000233505 TIAM1Q13009 1591 aa30.41■■■□□ 2.46
CENPA-201ENST00000233505 EHBP1L1Q8N3D4 1523 aa30.39■■■□□ 2.46
CENPA-201ENST00000233505 PHLDB1Q86UU1 1377 aa30.38■■■□□ 2.45
CENPA-201ENST00000233505 ARAP3Q8WWN8 1544 aa30.36■■■□□ 2.45
CENPA-201ENST00000233505 PLCH2O75038 1416 aa30.35■■■□□ 2.45
CENPA-201ENST00000233505 NEO1Q92859 1461 aa30.35■■■□□ 2.45
CENPA-201ENST00000233505 COL17A1Q9UMD9 1497 aaPredicted RBP30.34■■■□□ 2.45
CENPA-201ENST00000233505 LRRC9Q6ZRR7 1453 aa30.31■■■□□ 2.44
CENPA-201ENST00000233505 FANCAO15360 1455 aa30.27■■■□□ 2.44
CENPA-201ENST00000233505 APLP2Q06481 763 aa30.27■■■□□ 2.44
CENPA-201ENST00000233505 CFAP74Q9C0B2 1584 aa30.24■■■□□ 2.43
CENPA-201ENST00000233505 MYO5CQ9NQX4 1742 aa30.22■■■□□ 2.43
CENPA-201ENST00000233505 EFCAB2Q5VUJ9 269 aa30.22■■■□□ 2.43
CENPA-201ENST00000233505 AKNAQ7Z591 1439 aa30.21■■■□□ 2.43
CENPA-201ENST00000233505 GPATCH8Q9UKJ3 1502 aaKnown RBP30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms