RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 CLIP1P30622 1438 aa15.13■□□□□ 0.01
MDH1-201ENST00000233114 VPS8Q8N3P4 1428 aa15.11■□□□□ 0.01
MDH1-201ENST00000233114 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
MDH1-201ENST00000233114 CUX1P39880 1505 aa15.08■□□□□ 0.01
MDH1-201ENST00000233114 PRXQ9BXM0 1461 aa15.08■□□□□ 0
MDH1-201ENST00000233114 POLA2Q14181 598 aa15.08■□□□□ 0
MDH1-201ENST00000233114 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
MDH1-201ENST00000233114 KIF27Q86VH2 1401 aa15.03■□□□□ -0
MDH1-201ENST00000233114 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
MDH1-201ENST00000233114 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
MDH1-201ENST00000233114 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
MDH1-201ENST00000233114 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
MDH1-201ENST00000233114 CC2D2AQ9P2K1 1620 aa14.9□□□□□ -0.02
MDH1-201ENST00000233114 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
MDH1-201ENST00000233114 TTBK1Q5TCY1 1321 aaPredicted RBP14.85□□□□□ -0.03
MDH1-201ENST00000233114 CUX2O14529 1486 aa14.83□□□□□ -0.04
MDH1-201ENST00000233114 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
MDH1-201ENST00000233114 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
MDH1-201ENST00000233114 IGF1RP08069 1367 aa14.81□□□□□ -0.04
MDH1-201ENST00000233114 MAP3K1Q13233 1512 aa14.8□□□□□ -0.04
MDH1-201ENST00000233114 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
MDH1-201ENST00000233114 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
MDH1-201ENST00000233114 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
MDH1-201ENST00000233114 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.04
MDH1-201ENST00000233114 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.05
MDH1-201ENST00000233114 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
MDH1-201ENST00000233114 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
MDH1-201ENST00000233114 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
MDH1-201ENST00000233114 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
MDH1-201ENST00000233114 LAMC3Q9Y6N6 1575 aa14.73□□□□□ -0.05
MDH1-201ENST00000233114 CUL7Q14999 1698 aa14.72□□□□□ -0.05
MDH1-201ENST00000233114 TOPBP1Q92547 1522 aa14.71□□□□□ -0.06
MDH1-201ENST00000233114 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
MDH1-201ENST00000233114 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
MDH1-201ENST00000233114 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
MDH1-201ENST00000233114 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
MDH1-201ENST00000233114 RANGAP1P46060 587 aaPredicted RBP14.68□□□□□ -0.06
MDH1-201ENST00000233114 EFCAB5A4FU69 1503 aa14.68□□□□□ -0.06
MDH1-201ENST00000233114 POLA1P09884 1462 aaPredicted RBP14.67□□□□□ -0.06
MDH1-201ENST00000233114 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
MDH1-201ENST00000233114 KANK4Q5T7N3 995 aaPredicted RBP14.65□□□□□ -0.06
MDH1-201ENST00000233114 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
MDH1-201ENST00000233114 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
MDH1-201ENST00000233114 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
MDH1-201ENST00000233114 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.076e-7■■■■□ 21.6
MDH1-201ENST00000233114 CTTNBP2Q8WZ74 1663 aa14.62□□□□□ -0.07
MDH1-201ENST00000233114 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
MDH1-201ENST00000233114 LRRC9Q6ZRR7 1453 aa14.59□□□□□ -0.07
MDH1-201ENST00000233114 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
MDH1-201ENST00000233114 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
MDH1-201ENST00000233114 NESP48681 1621 aa14.58□□□□□ -0.07
MDH1-201ENST00000233114 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.07
MDH1-201ENST00000233114 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
MDH1-201ENST00000233114 PDS5BQ9NTI5 1447 aa14.57□□□□□ -0.08
MDH1-201ENST00000233114 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
MDH1-201ENST00000233114 PCF11O94913 1555 aaKnown RBP14.57□□□□□ -0.08
MDH1-201ENST00000233114 CENPBP07199 599 aaPredicted RBP14.55□□□□□ -0.08
MDH1-201ENST00000233114 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
MDH1-201ENST00000233114 ZBTB22O15209 634 aa14.54□□□□□ -0.08
MDH1-201ENST00000233114 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.08
MDH1-201ENST00000233114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.52□□□□□ -0.09
MDH1-201ENST00000233114 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
MDH1-201ENST00000233114 PIP4P2Q8N4L2 257 aa14.5□□□□□ -0.09
MDH1-201ENST00000233114 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
MDH1-201ENST00000233114 SAMD9Q5K651 1589 aa14.49□□□□□ -0.09
MDH1-201ENST00000233114 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
MDH1-201ENST00000233114 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
MDH1-201ENST00000233114 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
MDH1-201ENST00000233114 FHOD3Q2V2M9 1422 aa14.47□□□□□ -0.09
MDH1-201ENST00000233114 PHLDB1Q86UU1 1377 aa14.46□□□□□ -0.1
MDH1-201ENST00000233114 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
MDH1-201ENST00000233114 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
MDH1-201ENST00000233114 PITPNM1O00562 1244 aa14.45□□□□□ -0.1
MDH1-201ENST00000233114 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
MDH1-201ENST00000233114 RAB3GAP2Q9H2M9 1393 aa14.43□□□□□ -0.1
MDH1-201ENST00000233114 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
MDH1-201ENST00000233114 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
MDH1-201ENST00000233114 MAPKBP1O60336 1514 aa14.4□□□□□ -0.1
MDH1-201ENST00000233114 GRIN2BQ13224 1484 aa14.38□□□□□ -0.11
MDH1-201ENST00000233114 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
MDH1-201ENST00000233114 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
MDH1-201ENST00000233114 TDRD9Q8NDG6 1382 aaKnown RBP14.38□□□□□ -0.11
MDH1-201ENST00000233114 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
MDH1-201ENST00000233114 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.116e-6■■■■□ 22.2
MDH1-201ENST00000233114 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
MDH1-201ENST00000233114 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
MDH1-201ENST00000233114 FGD6Q6ZV73 1430 aa14.36□□□□□ -0.11
MDH1-201ENST00000233114 TIMELESSQ9UNS1 1208 aa14.36□□□□□ -0.11
MDH1-201ENST00000233114 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
MDH1-201ENST00000233114 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
MDH1-201ENST00000233114 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
MDH1-201ENST00000233114 SUPT6HQ7KZ85 1726 aaKnown RBP14.34□□□□□ -0.11
MDH1-201ENST00000233114 MIER1Q8N108 512 aa14.33□□□□□ -0.11
MDH1-201ENST00000233114 HAX1O00165 279 aa14.33□□□□□ -0.12
MDH1-201ENST00000233114 MTUS2Q5JR59 1369 aa14.32□□□□□ -0.12
MDH1-201ENST00000233114 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
MDH1-201ENST00000233114 IQGAP2Q13576 1575 aa14.31□□□□□ -0.12
MDH1-201ENST00000233114 ITGAEP38570 1179 aa14.31□□□□□ -0.12
MDH1-201ENST00000233114 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
MDH1-201ENST00000233114 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms