RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 NUP160Q12769 1436 aa17.92■□□□□ 0.46
CTSC-201ENST00000227266 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
CTSC-201ENST00000227266 OSCARQ8IYS5 282 aa17.88■□□□□ 0.45
CTSC-201ENST00000227266 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
CTSC-201ENST00000227266 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
CTSC-201ENST00000227266 IQGAP2Q13576 1575 aa17.83■□□□□ 0.45
CTSC-201ENST00000227266 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
CTSC-201ENST00000227266 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
CTSC-201ENST00000227266 CLIP1P30622 1438 aa17.8■□□□□ 0.44
CTSC-201ENST00000227266 CLASP1Q7Z460 1538 aa17.79■□□□□ 0.44
CTSC-201ENST00000227266 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
CTSC-201ENST00000227266 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
CTSC-201ENST00000227266 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
CTSC-201ENST00000227266 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
CTSC-201ENST00000227266 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
CTSC-201ENST00000227266 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
CTSC-201ENST00000227266 DISP1Q96F81 1524 aa17.69■□□□□ 0.42
CTSC-201ENST00000227266 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
CTSC-201ENST00000227266 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
CTSC-201ENST00000227266 SHROOM2Q13796 1616 aa17.68■□□□□ 0.42
CTSC-201ENST00000227266 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
CTSC-201ENST00000227266 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
CTSC-201ENST00000227266 KIAA0556O60303 1618 aa17.65■□□□□ 0.42
CTSC-201ENST00000227266 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
CTSC-201ENST00000227266 PTPRGP23470 1445 aa17.58■□□□□ 0.4
CTSC-201ENST00000227266 FMN1Q68DA7 1419 aa17.57■□□□□ 0.4
CTSC-201ENST00000227266 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
CTSC-201ENST00000227266 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
CTSC-201ENST00000227266 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
CTSC-201ENST00000227266 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
CTSC-201ENST00000227266 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
CTSC-201ENST00000227266 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
CTSC-201ENST00000227266 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
CTSC-201ENST00000227266 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
CTSC-201ENST00000227266 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
CTSC-201ENST00000227266 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
CTSC-201ENST00000227266 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CTSC-201ENST00000227266 UACAQ9BZF9 1416 aa17.45■□□□□ 0.38
CTSC-201ENST00000227266 FYCO1Q9BQS8 1478 aa17.45■□□□□ 0.38
CTSC-201ENST00000227266 APLP2Q06481 763 aa17.43■□□□□ 0.38
CTSC-201ENST00000227266 DNAJC5Q9H3Z4 198 aa17.43■□□□□ 0.38
CTSC-201ENST00000227266 ABCA8O94911 1581 aa17.43■□□□□ 0.38
CTSC-201ENST00000227266 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
CTSC-201ENST00000227266 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
CTSC-201ENST00000227266 HECW1Q76N89 1606 aa17.39■□□□□ 0.38
CTSC-201ENST00000227266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
CTSC-201ENST00000227266 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
CTSC-201ENST00000227266 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
CTSC-201ENST00000227266 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
CTSC-201ENST00000227266 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
CTSC-201ENST00000227266 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
CTSC-201ENST00000227266 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
CTSC-201ENST00000227266 ADCY10Q96PN6 1610 aa17.34■□□□□ 0.37
CTSC-201ENST00000227266 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
CTSC-201ENST00000227266 ATP10BO94823 1461 aa17.33■□□□□ 0.36
CTSC-201ENST00000227266 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTSC-201ENST00000227266 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
CTSC-201ENST00000227266 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
CTSC-201ENST00000227266 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
CTSC-201ENST00000227266 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
CTSC-201ENST00000227266 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
CTSC-201ENST00000227266 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
CTSC-201ENST00000227266 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
CTSC-201ENST00000227266 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.35
CTSC-201ENST00000227266 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
CTSC-201ENST00000227266 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
CTSC-201ENST00000227266 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
CTSC-201ENST00000227266 MAGI3Q5TCQ9 1506 aa17.22■□□□□ 0.35
CTSC-201ENST00000227266 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
CTSC-201ENST00000227266 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
CTSC-201ENST00000227266 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
CTSC-201ENST00000227266 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
CTSC-201ENST00000227266 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
CTSC-201ENST00000227266 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
CTSC-201ENST00000227266 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
CTSC-201ENST00000227266 KIF14Q15058 1648 aa17.1■□□□□ 0.33
CTSC-201ENST00000227266 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
CTSC-201ENST00000227266 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
CTSC-201ENST00000227266 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
CTSC-201ENST00000227266 ABCC10Q5T3U5 1492 aa17.06■□□□□ 0.32
CTSC-201ENST00000227266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSC-201ENST00000227266 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
CTSC-201ENST00000227266 MYOM3Q5VTT5 1437 aa17.03■□□□□ 0.32
CTSC-201ENST00000227266 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.32
CTSC-201ENST00000227266 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.31
CTSC-201ENST00000227266 CFDP1Q9UEE9 299 aaPredicted RBP17.02■□□□□ 0.31
CTSC-201ENST00000227266 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
CTSC-201ENST00000227266 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
CTSC-201ENST00000227266 CD109Q6YHK3 1445 aa16.98■□□□□ 0.31
CTSC-201ENST00000227266 ABCA9Q8IUA7 1624 aa16.98■□□□□ 0.31
CTSC-201ENST00000227266 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
CTSC-201ENST00000227266 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
CTSC-201ENST00000227266 PLCH2O75038 1416 aa16.97■□□□□ 0.31
CTSC-201ENST00000227266 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.3
CTSC-201ENST00000227266 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.3
CTSC-201ENST00000227266 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
CTSC-201ENST00000227266 ZNF644Q9H582 1327 aaPredicted RBP16.95■□□□□ 0.3
CTSC-201ENST00000227266 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
CTSC-201ENST00000227266 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
CTSC-201ENST00000227266 GLI2P10070 1586 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms